RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeastyeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT2YER161C MTC1P47018 478 aaKnown RBP13.19□□□□□ -0.3
SPT2YER161C FAP1P53971 965 aa12.53□□□□□ -0.4
SPT2YER161C DRS1P32892 752 aaKnown RBP11.9□□□□□ -0.5
SPT2YER161C PRY3P47033 881 aa11.79□□□□□ -0.52
SPT2YER161C PRI1P10363 409 aa11.38□□□□□ -0.59
SPT2YER161C AAD16Q02895 342 aa11.38□□□□□ -0.59
SPT2YER161C YCK3P39962 524 aa11.03□□□□□ -0.64
SPT2YER161C ISW2Q08773 1120 aa11.03□□□□□ -0.64
SPT2YER161C RPG1P38249 964 aaKnown RBP10.95□□□□□ -0.66
SPT2YER161C HAA1Q12753 694 aaKnown RBP10.95□□□□□ -0.66
SPT2YER161C TSR3Q12094 313 aaKnown RBP10.78□□□□□ -0.68
SPT2YER161C DIP2Q12220 943 aaPredicted RBP10.57□□□□□ -0.72
SPT2YER161C RSE1Q04693 1361 aaKnown RBP10.35□□□□□ -0.75
SPT2YER161C MRPL32P25348 183 aa10.34□□□□□ -0.75
SPT2YER161C AVT3P36062 692 aa10.09□□□□□ -0.79
SPT2YER161C REB1P21538 810 aa10.07□□□□□ -0.8
SPT2YER161C RPL17AP05740 184 aaKnown RBP10.05□□□□□ -0.8
SPT2YER161C RPL17BP46990 184 aaKnown RBP10.05□□□□□ -0.8
SPT2YER161C YGL015CP33199 130 aa10.03□□□□□ -0.8
SPT2YER161C BFR2Q06631 534 aaKnown RBP9.87□□□□□ -0.83
SPT2YER161C CDC27P38042 758 aa9.73□□□□□ -0.85
SPT2YER161C SPT21P35209 758 aa9.59□□□□□ -0.87
SPT2YER161C YKR023WP36119 530 aaKnown RBP9.56□□□□□ -0.88
SPT2YER161C UBP10P53874 792 aaPredicted RBP9.51□□□□□ -0.89
SPT2YER161C MAP2P38174 421 aaKnown RBP9.49□□□□□ -0.89
SPT2YER161C BUD31P25337 157 aaPredicted RBP9.42□□□□□ -0.9
SPT2YER161C DCD1P06773 312 aa9.4□□□□□ -0.9
SPT2YER161C HOP09932 586 aa9.4□□□□□ -0.9
SPT2YER161C TFC8Q12308 588 aa9.37□□□□□ -0.91
SPT2YER161C SCY1P53009 804 aa9.22□□□□□ -0.93
SPT2YER161C RIM101P33400 625 aa9.17□□□□□ -0.94
SPT2YER161C TIF4632P39936 914 aaKnown RBP9.12□□□□□ -0.95
SPT2YER161C SLX5P32828 619 aaKnown RBP9.11□□□□□ -0.95
SPT2YER161C TGL3P40308 642 aa9.08□□□□□ -0.96
SPT2YER161C BCH2P36122 765 aa9.04□□□□□ -0.96
SPT2YER161C SIS1P25294 352 aaKnown RBP8.97□□□□□ -0.97
SPT2YER161C UBP9P39967 754 aa8.96□□□□□ -0.98
SPT2YER161C OXP1P28273 1286 aa8.82□□□□□ -1
SPT2YER161C EPS1P40557 701 aa8.8□□□□□ -1
SPT2YER161C BDF1P35817 686 aa8.77□□□□□ -1.01
SPT2YER161C PTP3P40048 928 aa8.71□□□□□ -1.02
SPT2YER161C YIL055CP40523 627 aaKnown RBP8.7□□□□□ -1.02
SPT2YER161C MST1P07236 462 aa8.66□□□□□ -1.02
SPT2YER161C TFA1P36100 482 aa8.64□□□□□ -1.03
SPT2YER161C YBL029C-AQ3E756 94 aa8.62□□□□□ -1.03
SPT2YER161C NSR1P27476 414 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
SPT2YER161C YOR238WQ08634 303 aa8.6□□□□□ -1.03
SPT2YER161C BBC1P47068 1157 aa8.58□□□□□ -1.04
SPT2YER161C RSM7P47150 247 aa8.58□□□□□ -1.04
SPT2YER161C AI2P03876 854 aa8.53□□□□□ -1.04
SPT2YER161C YAH1Q12184 172 aaKnown RBP8.52□□□□□ -1.05
SPT2YER161C YAP5P40574 245 aa8.49□□□□□ -1.05
SPT2YER161C VNX1P42839 908 aa8.46□□□□□ -1.06
SPT2YER161C WSC3Q12215 556 aa8.44□□□□□ -1.06
SPT2YER161C SPP1Q03012 353 aa8.41□□□□□ -1.06
SPT2YER161C YLR271WQ06152 274 aa8.35□□□□□ -1.07
SPT2YER161C GTT3P39996 337 aa8.33□□□□□ -1.08
SPT2YER161C PSD2P53037 1138 aaKnown RBP8.3□□□□□ -1.08
SPT2YER161C TIF11P38912 153 aaKnown RBP8.28□□□□□ -1.08
SPT2YER161C PIB1Q06651 286 aa8.26□□□□□ -1.09
SPT2YER161C FKH1P40466 484 aa8.24□□□□□ -1.09
SPT2YER161C AIR2Q12476 344 aaKnown RBP8.24□□□□□ -1.09
SPT2YER161C YJL171CP46992 396 aa8.23□□□□□ -1.09
SPT2YER161C MRM1P25270 412 aa8.2□□□□□ -1.1
SPT2YER161C SSP1P38871 571 aa8.17□□□□□ -1.1
SPT2YER161C LDB19Q12502 818 aa8.17□□□□□ -1.1
SPT2YER161C ULI1P43604 169 aa8.16□□□□□ -1.1
SPT2YER161C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
SPT2YER161C IOC2Q12072 812 aa8.14□□□□□ -1.11
SPT2YER161C MSB4Q12317 492 aa8.12□□□□□ -1.11
SPT2YER161C CST9Q06032 482 aa8.1□□□□□ -1.11
SPT2YER161C EAP1P36041 632 aaKnown RBP8.08□□□□□ -1.12
SPT2YER161C BMT6Q12291 365 aa8.07□□□□□ -1.12
SPT2YER161C YMR1P47147 688 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
SPT2YER161C YOL036WQ08206 761 aa8.04□□□□□ -1.12
SPT2YER161C VPS29P38759 282 aa8.03□□□□□ -1.12
SPT2YER161C SET4P42948 560 aa8.03□□□□□ -1.12
SPT2YER161C DBP1P24784 617 aaKnown RBP8.01□□□□□ -1.13
SPT2YER161C RTG3P38165 486 aa8.01□□□□□ -1.13
SPT2YER161C MGA2P40578 1113 aa8.01□□□□□ -1.13
SPT2YER161C YFR006WP43590 535 aa7.99□□□□□ -1.13
SPT2YER161C TRP5P00931 707 aaKnown RBP7.98□□□□□ -1.13
SPT2YER161C RTG1P32607 177 aa7.98□□□□□ -1.13
SPT2YER161C VMA1P17255 1071 aaKnown RBP7.97□□□□□ -1.13
SPT2YER161C STS1P38637 319 aa7.96□□□□□ -1.14
SPT2YER161C SAM3Q08986 587 aa7.95□□□□□ -1.14
SPT2YER161C RCR1P38212 213 aa7.93□□□□□ -1.14
SPT2YER161C YNL035CP53962 389 aaKnown RBP7.93□□□□□ -1.14
SPT2YER161C NCR1Q12200 1170 aa7.93□□□□□ -1.14
SPT2YER161C SEC61P32915 480 aa7.92□□□□□ -1.14
SPT2YER161C ABP1P15891 592 aaKnown RBP7.84□□□□□ -1.15
SPT2YER161C TFG1P41895 735 aaPredicted RBP7.82□□□□□ -1.16
SPT2YER161C JIP4Q03361 876 aa7.81□□□□□ -1.16
SPT2YER161C DAN4P47179 1161 aa7.8□□□□□ -1.16
SPT2YER161C GYP5Q12344 894 aa7.8□□□□□ -1.16
SPT2YER161C HTA1P04911 132 aaKnown RBP7.76□□□□□ -1.17
SPT2YER161C HTA2P04912 132 aa7.76□□□□□ -1.17
SPT2YER161C SAP30P38429 201 aa7.76□□□□□ -1.17
SPT2YER161C DCW1P36091 449 aa7.73□□□□□ -1.17
SPT2YER161C YDL129WQ07555 291 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms