RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeastyeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP5YER144C MTC1P47018 478 aaKnown RBP9.01□□□□□ -0.97
UBP5YER144C FAP1P53971 965 aa8.56□□□□□ -1.04
UBP5YER144C DRS1P32892 752 aaKnown RBP8.09□□□□□ -1.11
UBP5YER144C PRY3P47033 881 aa8.05□□□□□ -1.12
UBP5YER144C AAD16Q02895 342 aa7.79□□□□□ -1.16
UBP5YER144C PRI1P10363 409 aa7.78□□□□□ -1.16
UBP5YER144C ISW2Q08773 1120 aa7.58□□□□□ -1.2
UBP5YER144C HAA1Q12753 694 aaKnown RBP7.51□□□□□ -1.21
UBP5YER144C RPG1P38249 964 aaKnown RBP7.49□□□□□ -1.21
UBP5YER144C YCK3P39962 524 aa7.48□□□□□ -1.21
UBP5YER144C TSR3Q12094 313 aaKnown RBP7.36□□□□□ -1.23
UBP5YER144C DIP2Q12220 943 aaPredicted RBP7.2□□□□□ -1.26
UBP5YER144C MRPL32P25348 183 aa7.09□□□□□ -1.27
UBP5YER144C RSE1Q04693 1361 aaKnown RBP7.08□□□□□ -1.28
UBP5YER144C TFA1P36100 482 aa6.91□□□□□ -1.3
UBP5YER144C REB1P21538 810 aa6.9□□□□□ -1.3
UBP5YER144C RPL17AP05740 184 aaKnown RBP6.88□□□□□ -1.31
UBP5YER144C RPL17BP46990 184 aaKnown RBP6.88□□□□□ -1.31
UBP5YER144C YGL015CP33199 130 aa6.88□□□□□ -1.31
UBP5YER144C AVT3P36062 692 aa6.8□□□□□ -1.32
UBP5YER144C BFR2Q06631 534 aaKnown RBP6.78□□□□□ -1.32
UBP5YER144C CDC27P38042 758 aa6.63□□□□□ -1.35
UBP5YER144C YKR023WP36119 530 aaKnown RBP6.51□□□□□ -1.37
UBP5YER144C SPT21P35209 758 aa6.5□□□□□ -1.37
UBP5YER144C UBP10P53874 792 aaPredicted RBP6.5□□□□□ -1.37
UBP5YER144C MAP2P38174 421 aaKnown RBP6.48□□□□□ -1.37
UBP5YER144C BUD31P25337 157 aaPredicted RBP6.44□□□□□ -1.38
UBP5YER144C HOP09932 586 aa6.41□□□□□ -1.38
UBP5YER144C DCD1P06773 312 aa6.39□□□□□ -1.39
UBP5YER144C TFC8Q12308 588 aa6.39□□□□□ -1.39
UBP5YER144C SCY1P53009 804 aa6.3□□□□□ -1.4
UBP5YER144C TIF4632P39936 914 aaKnown RBP6.28□□□□□ -1.4
UBP5YER144C SLX5P32828 619 aaKnown RBP6.25□□□□□ -1.41
UBP5YER144C TGL3P40308 642 aa6.21□□□□□ -1.42
UBP5YER144C RIM101P33400 625 aa6.2□□□□□ -1.42
UBP5YER144C UBP9P39967 754 aa6.17□□□□□ -1.42
UBP5YER144C BCH2P36122 765 aa6.17□□□□□ -1.42
UBP5YER144C SIS1P25294 352 aaKnown RBP6.15□□□□□ -1.43
UBP5YER144C RQC2Q12532 1038 aaKnown RBP6.1□□□□□ -1.43
UBP5YER144C EPS1P40557 701 aa6.01□□□□□ -1.45
UBP5YER144C BDF1P35817 686 aa5.98□□□□□ -1.45
UBP5YER144C PTP3P40048 928 aa5.98□□□□□ -1.45
UBP5YER144C OXP1P28273 1286 aa5.97□□□□□ -1.45
UBP5YER144C YIL055CP40523 627 aaKnown RBP5.96□□□□□ -1.45
UBP5YER144C TAF7Q05021 590 aa5.93□□□□□ -1.46
UBP5YER144C YOR238WQ08634 303 aa5.89□□□□□ -1.47
UBP5YER144C YBL029C-AQ3E756 94 aa5.89□□□□□ -1.47
UBP5YER144C BBC1P47068 1157 aa5.88□□□□□ -1.47
UBP5YER144C MST1P07236 462 aa5.87□□□□□ -1.47
UBP5YER144C DMA1P38823 416 aa5.87□□□□□ -1.47
UBP5YER144C RSM7P47150 247 aa5.84□□□□□ -1.48
UBP5YER144C YAH1Q12184 172 aaKnown RBP5.82□□□□□ -1.48
UBP5YER144C AI2P03876 854 aa5.82□□□□□ -1.48
UBP5YER144C NSR1P27476 414 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
UBP5YER144C YAP5P40574 245 aa5.8□□□□□ -1.48
UBP5YER144C VNX1P42839 908 aa5.79□□□□□ -1.48
UBP5YER144C SGS1P35187 1447 aa5.79□□□□□ -1.48
UBP5YER144C SPP1Q03012 353 aa5.77□□□□□ -1.49
UBP5YER144C WSC3Q12215 556 aa5.77□□□□□ -1.49
UBP5YER144C INO80P53115 1489 aa5.77□□□□□ -1.49
UBP5YER144C MON2P48563 1636 aaPredicted RBP5.76□□□□□ -1.49
UBP5YER144C GTT3P39996 337 aa5.73□□□□□ -1.49
UBP5YER144C TCB3Q03640 1545 aaKnown RBP5.73□□□□□ -1.49
UBP5YER144C TIF11P38912 153 aaKnown RBP5.68□□□□□ -1.5
UBP5YER144C YJL171CP46992 396 aa5.67□□□□□ -1.5
UBP5YER144C TY1B-DR4Q07793 1604 aa5.66□□□□□ -1.5
UBP5YER144C YLR271WQ06152 274 aa5.65□□□□□ -1.5
UBP5YER144C LEO1P38439 464 aa5.64□□□□□ -1.51
UBP5YER144C FKH1P40466 484 aa5.64□□□□□ -1.51
UBP5YER144C AIR2Q12476 344 aaKnown RBP5.64□□□□□ -1.51
UBP5YER144C PIB1Q06651 286 aa5.63□□□□□ -1.51
UBP5YER144C PSD2P53037 1138 aaKnown RBP5.6□□□□□ -1.51
UBP5YER144C ULI1P43604 169 aa5.6□□□□□ -1.51
UBP5YER144C LDB19Q12502 818 aa5.6□□□□□ -1.51
UBP5YER144C MRM1P25270 412 aa5.59□□□□□ -1.51
UBP5YER144C SWR1Q05471 1514 aa5.58□□□□□ -1.52
UBP5YER144C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
UBP5YER144C IOC2Q12072 812 aa5.54□□□□□ -1.52
UBP5YER144C BMT6Q12291 365 aa5.54□□□□□ -1.52
UBP5YER144C MSB4Q12317 492 aa5.53□□□□□ -1.52
UBP5YER144C EAP1P36041 632 aaKnown RBP5.52□□□□□ -1.53
UBP5YER144C SSP1P38871 571 aa5.52□□□□□ -1.53
UBP5YER144C HSL1P34244 1518 aa5.51□□□□□ -1.53
UBP5YER144C SAS10Q12136 610 aaPredicted RBP5.5□□□□□ -1.53
UBP5YER144C SET4P42948 560 aa5.49□□□□□ -1.53
UBP5YER144C YOL036WQ08206 761 aa5.49□□□□□ -1.53
UBP5YER144C SPT6P23615 1451 aaKnown RBP5.49□□□□□ -1.53
UBP5YER144C YMR1P47147 688 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
UBP5YER144C SPA2P23201 1466 aaKnown RBP5.48□□□□□ -1.53
UBP5YER144C RTG1P32607 177 aa5.47□□□□□ -1.53
UBP5YER144C DBP1P24784 617 aaKnown RBP5.46□□□□□ -1.53
UBP5YER144C SSN2P38931 1420 aa5.46□□□□□ -1.54
UBP5YER144C TRP5P00931 707 aaKnown RBP5.46□□□□□ -1.54
UBP5YER144C YFR006WP43590 535 aa5.46□□□□□ -1.54
UBP5YER144C LEU3P08638 886 aa5.45□□□□□ -1.54
UBP5YER144C RTG3P38165 486 aa5.45□□□□□ -1.54
UBP5YER144C DNA2P38859 1522 aa5.45□□□□□ -1.54
UBP5YER144C CST9Q06032 482 aa5.44□□□□□ -1.54
UBP5YER144C KOG1P38873 1557 aa5.44□□□□□ -1.54
UBP5YER144C VPS29P38759 282 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms