RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B FAP1P53971 965 aa10.35□□□□□ -0.75
SBH1YER087C-B PRY3P47033 881 aa9.77□□□□□ -0.85
SBH1YER087C-B MTC1P47018 478 aaKnown RBP9.59□□□□□ -0.87
SBH1YER087C-B YCK3P39962 524 aa9.08□□□□□ -0.96
SBH1YER087C-B AAD16Q02895 342 aa8.99□□□□□ -0.97
SBH1YER087C-B HAA1Q12753 694 aaKnown RBP8.94□□□□□ -0.98
SBH1YER087C-B PRI1P10363 409 aa8.86□□□□□ -0.99
SBH1YER087C-B TSR3Q12094 313 aaKnown RBP8.4□□□□□ -1.06
SBH1YER087C-B RPG1P38249 964 aaKnown RBP8.29□□□□□ -1.08
SBH1YER087C-B ISW2Q08773 1120 aa8.27□□□□□ -1.09
SBH1YER087C-B YGL015CP33199 130 aa8.02□□□□□ -1.13
SBH1YER087C-B MRPL32P25348 183 aa8.01□□□□□ -1.13
SBH1YER087C-B BUD31P25337 157 aaPredicted RBP7.94□□□□□ -1.14
SBH1YER087C-B DRS1P32892 752 aaKnown RBP7.68□□□□□ -1.18
SBH1YER087C-B SIS1P25294 352 aaKnown RBP7.51□□□□□ -1.21
SBH1YER087C-B CDC27P38042 758 aa7.39□□□□□ -1.23
SBH1YER087C-B REB1P21538 810 aa7.33□□□□□ -1.24
SBH1YER087C-B MAP2P38174 421 aaKnown RBP7.33□□□□□ -1.24
SBH1YER087C-B RSE1Q04693 1361 aaKnown RBP7.32□□□□□ -1.24
SBH1YER087C-B RPL17AP05740 184 aaKnown RBP7.24□□□□□ -1.25
SBH1YER087C-B RPL17BP46990 184 aaKnown RBP7.24□□□□□ -1.25
SBH1YER087C-B UBP10P53874 792 aaPredicted RBP7.23□□□□□ -1.25
SBH1YER087C-B DIP2Q12220 943 aaPredicted RBP7.2□□□□□ -1.26
SBH1YER087C-B UBP9P39967 754 aa7.19□□□□□ -1.26
SBH1YER087C-B DCD1P06773 312 aa7.01□□□□□ -1.29
SBH1YER087C-B YKR023WP36119 530 aaKnown RBP7□□□□□ -1.29
SBH1YER087C-B TIF4632P39936 914 aaKnown RBP7□□□□□ -1.29
SBH1YER087C-B HOP09932 586 aa6.96□□□□□ -1.3
SBH1YER087C-B TGL3P40308 642 aa6.95□□□□□ -1.3
SBH1YER087C-B SCY1P53009 804 aa6.95□□□□□ -1.3
SBH1YER087C-B SLX5P32828 619 aaKnown RBP6.88□□□□□ -1.31
SBH1YER087C-B TFC8Q12308 588 aa6.84□□□□□ -1.31
SBH1YER087C-B YBL029C-AQ3E756 94 aa6.73□□□□□ -1.33
SBH1YER087C-B SPT21P35209 758 aa6.71□□□□□ -1.34
SBH1YER087C-B BCH2P36122 765 aa6.6□□□□□ -1.35
SBH1YER087C-B YJL171CP46992 396 aa6.54□□□□□ -1.36
SBH1YER087C-B VNX1P42839 908 aa6.52□□□□□ -1.37
SBH1YER087C-B SPP1Q03012 353 aa6.49□□□□□ -1.37
SBH1YER087C-B AVT3P36062 692 aa6.48□□□□□ -1.37
SBH1YER087C-B AIR2Q12476 344 aaKnown RBP6.46□□□□□ -1.38
SBH1YER087C-B MST1P07236 462 aa6.45□□□□□ -1.38
SBH1YER087C-B YOR238WQ08634 303 aa6.45□□□□□ -1.38
SBH1YER087C-B WSC3Q12215 556 aa6.45□□□□□ -1.38
SBH1YER087C-B FKH1P40466 484 aa6.36□□□□□ -1.39
SBH1YER087C-B BDF1P35817 686 aa6.34□□□□□ -1.39
SBH1YER087C-B EPS1P40557 701 aa6.33□□□□□ -1.4
SBH1YER087C-B BMT6Q12291 365 aa6.29□□□□□ -1.4
SBH1YER087C-B TIF11P38912 153 aaKnown RBP6.28□□□□□ -1.4
SBH1YER087C-B LDB19Q12502 818 aa6.25□□□□□ -1.41
SBH1YER087C-B YAP5P40574 245 aa6.19□□□□□ -1.42
SBH1YER087C-B RIM101P33400 625 aa6.17□□□□□ -1.42
SBH1YER087C-B GTT3P39996 337 aa6.17□□□□□ -1.42
SBH1YER087C-B ULI1P43604 169 aa6.16□□□□□ -1.42
SBH1YER087C-B NSR1P27476 414 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43 RIP-Chip
SBH1YER087C-B IOC2Q12072 812 aa6.11□□□□□ -1.43
SBH1YER087C-B PIB1Q06651 286 aa6.04□□□□□ -1.44
SBH1YER087C-B PTP3P40048 928 aa6.02□□□□□ -1.45
SBH1YER087C-B RTG1P32607 177 aa5.99□□□□□ -1.45
SBH1YER087C-B OXP1P28273 1286 aa5.98□□□□□ -1.45
SBH1YER087C-B NCR1Q12200 1170 aa5.97□□□□□ -1.45
SBH1YER087C-B BBC1P47068 1157 aa5.96□□□□□ -1.46
SBH1YER087C-B YIL055CP40523 627 aaKnown RBP5.93□□□□□ -1.46
SBH1YER087C-B RGA2Q06407 1009 aa5.93□□□□□ -1.46
SBH1YER087C-B BCK2P33306 851 aa5.92□□□□□ -1.46
SBH1YER087C-B TRP5P00931 707 aaKnown RBP5.88□□□□□ -1.47
SBH1YER087C-B AI2P03876 854 aa5.88□□□□□ -1.47
SBH1YER087C-B SET4P42948 560 aa5.88□□□□□ -1.47
SBH1YER087C-B EAP1P36041 632 aaKnown RBP5.87□□□□□ -1.47
SBH1YER087C-B MSB4Q12317 492 aa5.84□□□□□ -1.47
SBH1YER087C-B SAP30P38429 201 aa5.83□□□□□ -1.48
SBH1YER087C-B YNL035CP53962 389 aaKnown RBP5.82□□□□□ -1.48
SBH1YER087C-B YOL036WQ08206 761 aa5.81□□□□□ -1.48
SBH1YER087C-B SEC61P32915 480 aa5.8□□□□□ -1.48
SBH1YER087C-B TFG1P41895 735 aaPredicted RBP5.8□□□□□ -1.48
SBH1YER087C-B RSM7P47150 247 aa5.8□□□□□ -1.48
SBH1YER087C-B CHL1P22516 861 aaPredicted RBP5.75□□□□□ -1.49
SBH1YER087C-B BFR2Q06631 534 aaKnown RBP5.73□□□□□ -1.49
SBH1YER087C-B YAH1Q12184 172 aaKnown RBP5.73□□□□□ -1.49
SBH1YER087C-B VRP1P37370 817 aa5.69□□□□□ -1.5
SBH1YER087C-B PRE3P38624 215 aa5.69□□□□□ -1.5
SBH1YER087C-B DPS1P04802 557 aaKnown RBP5.68□□□□□ -1.5
SBH1YER087C-B RGA1P39083 1007 aa5.68□□□□□ -1.5
SBH1YER087C-B XDJ1P39102 459 aa5.66□□□□□ -1.5
SBH1YER087C-B YDL129WQ07555 291 aa5.65□□□□□ -1.5
SBH1YER087C-B MRM1P25270 412 aa5.63□□□□□ -1.51
SBH1YER087C-B YFR006WP43590 535 aa5.62□□□□□ -1.51
SBH1YER087C-B DAN4P47179 1161 aa5.62□□□□□ -1.51
SBH1YER087C-B DBP1P24784 617 aaKnown RBP5.58□□□□□ -1.52
SBH1YER087C-B YDR344CQ05510 147 aa5.57□□□□□ -1.52
SBH1YER087C-B VMA1P17255 1071 aaKnown RBP5.56□□□□□ -1.52
SBH1YER087C-B JIP4Q03361 876 aa5.55□□□□□ -1.52
SBH1YER087C-B YMR1P47147 688 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SBH1YER087C-B SRC1Q03707 834 aa5.52□□□□□ -1.53
SBH1YER087C-B ELP4Q02884 456 aaKnown RBP5.51□□□□□ -1.53
SBH1YER087C-B SAM3Q08986 587 aa5.5□□□□□ -1.53
SBH1YER087C-B DCW1P36091 449 aa5.49□□□□□ -1.53
SBH1YER087C-B PSD2P53037 1138 aaKnown RBP5.49□□□□□ -1.53
SBH1YER087C-B STS1P38637 319 aa5.47□□□□□ -1.53
SBH1YER087C-B HTA1P04911 132 aaKnown RBP5.46□□□□□ -1.54
SBH1YER087C-B HTA2P04912 132 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms