RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeastyeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL6YER059W MTC1P47018 478 aaKnown RBP18.83■□□□□ 0.6
PCL6YER059W FAP1P53971 965 aa17.35■□□□□ 0.37
PCL6YER059W DRS1P32892 752 aaKnown RBP17.2■□□□□ 0.34
PCL6YER059W PRY3P47033 881 aa16.35■□□□□ 0.21
PCL6YER059W PRI1P10363 409 aa16.09■□□□□ 0.17
PCL6YER059W AAD16Q02895 342 aa16.02■□□□□ 0.16
PCL6YER059W ISW2Q08773 1120 aa15.64■□□□□ 0.09
PCL6YER059W RPG1P38249 964 aaKnown RBP15.55■□□□□ 0.08
PCL6YER059W YCK3P39962 524 aa15.53■□□□□ 0.08
PCL6YER059W HAA1Q12753 694 aaKnown RBP15.26■□□□□ 0.03
PCL6YER059W DIP2Q12220 943 aaPredicted RBP15.23■□□□□ 0.03
PCL6YER059W TSR3Q12094 313 aaKnown RBP15.22■□□□□ 0.03
PCL6YER059W RSE1Q04693 1361 aaKnown RBP14.8□□□□□ -0.04
PCL6YER059W AVT3P36062 692 aa14.59□□□□□ -0.07
PCL6YER059W MRPL32P25348 183 aa14.55□□□□□ -0.08
PCL6YER059W RPL17AP05740 184 aaKnown RBP14.39□□□□□ -0.11
PCL6YER059W RPL17BP46990 184 aaKnown RBP14.39□□□□□ -0.11
PCL6YER059W REB1P21538 810 aa14.31□□□□□ -0.12
PCL6YER059W BFR2Q06631 534 aaKnown RBP14.12□□□□□ -0.15
PCL6YER059W YGL015CP33199 130 aa14.04□□□□□ -0.16
PCL6YER059W CDC27P38042 758 aa13.85□□□□□ -0.19
PCL6YER059W SPT21P35209 758 aa13.76□□□□□ -0.21
PCL6YER059W YKR023WP36119 530 aaKnown RBP13.71□□□□□ -0.21
PCL6YER059W HOP09932 586 aa13.44□□□□□ -0.26
PCL6YER059W MAP2P38174 421 aaKnown RBP13.44□□□□□ -0.26
PCL6YER059W DCD1P06773 312 aa13.42□□□□□ -0.26
PCL6YER059W UBP10P53874 792 aaPredicted RBP13.4□□□□□ -0.26
PCL6YER059W TFC8Q12308 588 aa13.4□□□□□ -0.26
PCL6YER059W RIM101P33400 625 aa13.18□□□□□ -0.3
PCL6YER059W SCY1P53009 804 aa13.09□□□□□ -0.31
PCL6YER059W BUD31P25337 157 aaPredicted RBP13.07□□□□□ -0.32
PCL6YER059W BCH2P36122 765 aa12.96□□□□□ -0.33
PCL6YER059W TFA1P36100 482 aa12.94□□□□□ -0.34
PCL6YER059W SLX5P32828 619 aaKnown RBP12.91□□□□□ -0.34
PCL6YER059W TIF4632P39936 914 aaKnown RBP12.83□□□□□ -0.36
PCL6YER059W TGL3P40308 642 aa12.81□□□□□ -0.36
PCL6YER059W OXP1P28273 1286 aa12.76□□□□□ -0.37
PCL6YER059W EPS1P40557 701 aa12.6□□□□□ -0.39
PCL6YER059W BDF1P35817 686 aa12.56□□□□□ -0.4
PCL6YER059W PTP3P40048 928 aa12.52□□□□□ -0.41
PCL6YER059W YIL055CP40523 627 aaKnown RBP12.49□□□□□ -0.41
PCL6YER059W UBP9P39967 754 aa12.48□□□□□ -0.41
PCL6YER059W SIS1P25294 352 aaKnown RBP12.38□□□□□ -0.43
PCL6YER059W RSM7P47150 247 aa12.34□□□□□ -0.43
PCL6YER059W YAH1Q12184 172 aaKnown RBP12.32□□□□□ -0.44
PCL6YER059W AI2P03876 854 aa12.27□□□□□ -0.45
PCL6YER059W MST1P07236 462 aa12.25□□□□□ -0.45
PCL6YER059W BBC1P47068 1157 aa12.24□□□□□ -0.45
PCL6YER059W YOR238WQ08634 303 aa12.18□□□□□ -0.46
PCL6YER059W YBL029C-AQ3E756 94 aa12.15□□□□□ -0.46
PCL6YER059W NSR1P27476 414 aaKnown RBP RIP-Chip data12.12□□□□□ -0.47not detected
PCL6YER059W YLR271WQ06152 274 aa12.1□□□□□ -0.47
PCL6YER059W YAP5P40574 245 aa12.04□□□□□ -0.48
PCL6YER059W VNX1P42839 908 aa11.98□□□□□ -0.49
PCL6YER059W PSD2P53037 1138 aaKnown RBP11.96□□□□□ -0.49
PCL6YER059W WSC3Q12215 556 aa11.9□□□□□ -0.5
PCL6YER059W SPP1Q03012 353 aa11.85□□□□□ -0.51
PCL6YER059W MRM1P25270 412 aa11.81□□□□□ -0.52
PCL6YER059W SSP1P38871 571 aa11.81□□□□□ -0.52
PCL6YER059W PIB1Q06651 286 aa11.79□□□□□ -0.52
PCL6YER059W GTT3P39996 337 aa11.77□□□□□ -0.53
PCL6YER059W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
PCL6YER059W TIF11P38912 153 aaKnown RBP11.72□□□□□ -0.53
PCL6YER059W CST9Q06032 482 aa11.67□□□□□ -0.54
PCL6YER059W RQC2Q12532 1038 aaKnown RBP11.66□□□□□ -0.54
PCL6YER059W AIR2Q12476 344 aaKnown RBP11.64□□□□□ -0.55
PCL6YER059W FKH1P40466 484 aa11.63□□□□□ -0.55
PCL6YER059W VPS29P38759 282 aa11.58□□□□□ -0.56
PCL6YER059W ULI1P43604 169 aa11.57□□□□□ -0.56
PCL6YER059W IOC2Q12072 812 aa11.56□□□□□ -0.56
PCL6YER059W LDB19Q12502 818 aa11.56□□□□□ -0.56
PCL6YER059W MGA2P40578 1113 aa11.55□□□□□ -0.56
PCL6YER059W YMR1P47147 688 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56not detected
PCL6YER059W DBP1P24784 617 aaKnown RBP11.51□□□□□ -0.57
PCL6YER059W YFR006WP43590 535 aa11.51□□□□□ -0.57
PCL6YER059W RTG3P38165 486 aa11.5□□□□□ -0.57
PCL6YER059W YJL171CP46992 396 aa11.48□□□□□ -0.57
PCL6YER059W STS1P38637 319 aa11.47□□□□□ -0.57
PCL6YER059W YOL036WQ08206 761 aa11.46□□□□□ -0.57
PCL6YER059W MSB4Q12317 492 aa11.46□□□□□ -0.57
PCL6YER059W SET4P42948 560 aa11.45□□□□□ -0.58
PCL6YER059W RCR1P38212 213 aa11.44□□□□□ -0.58
PCL6YER059W VMA1P17255 1071 aaKnown RBP11.4□□□□□ -0.58
PCL6YER059W EAP1P36041 632 aaKnown RBP11.38□□□□□ -0.59
PCL6YER059W TRP5P00931 707 aaKnown RBP11.37□□□□□ -0.59
PCL6YER059W SAM3Q08986 587 aa11.33□□□□□ -0.6
PCL6YER059W BMT6Q12291 365 aa11.33□□□□□ -0.6
PCL6YER059W RTG1P32607 177 aa11.32□□□□□ -0.6
PCL6YER059W NCR1Q12200 1170 aa11.24□□□□□ -0.61
PCL6YER059W YNL035CP53962 389 aaKnown RBP11.23□□□□□ -0.61
PCL6YER059W SEC61P32915 480 aa11.18□□□□□ -0.62
PCL6YER059W GYP5Q12344 894 aa11.16□□□□□ -0.62
PCL6YER059W DAN4P47179 1161 aa11.12□□□□□ -0.63
PCL6YER059W DCW1P36091 449 aa11.09□□□□□ -0.63
PCL6YER059W ABP1P15891 592 aaKnown RBP11.06□□□□□ -0.64
PCL6YER059W HTA1P04911 132 aaKnown RBP11.05□□□□□ -0.64
PCL6YER059W HTA2P04912 132 aa11.05□□□□□ -0.64
PCL6YER059W JIP4Q03361 876 aa11.05□□□□□ -0.64
PCL6YER059W TFG1P41895 735 aaPredicted RBP11.02□□□□□ -0.65
PCL6YER059W SAP30P38429 201 aa11.01□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms