RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeastyeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMI40YER003C MTC1P47018 478 aaKnown RBP11.72□□□□□ -0.53
PMI40YER003C FAP1P53971 965 aa11.48□□□□□ -0.57
PMI40YER003C PRY3P47033 881 aa10.84□□□□□ -0.67
PMI40YER003C AAD16Q02895 342 aa10.34□□□□□ -0.75
PMI40YER003C PRI1P10363 409 aa10.32□□□□□ -0.76
PMI40YER003C YCK3P39962 524 aa10.23□□□□□ -0.77
PMI40YER003C DRS1P32892 752 aaKnown RBP10.22□□□□□ -0.77
PMI40YER003C HAA1Q12753 694 aaKnown RBP10.02□□□□□ -0.81
PMI40YER003C ISW2Q08773 1120 aa9.85□□□□□ -0.83
PMI40YER003C RPG1P38249 964 aaKnown RBP9.83□□□□□ -0.84
PMI40YER003C TSR3Q12094 313 aaKnown RBP9.78□□□□□ -0.84
PMI40YER003C MRPL32P25348 183 aa9.31□□□□□ -0.92
PMI40YER003C DIP2Q12220 943 aaPredicted RBP9.22□□□□□ -0.93
PMI40YER003C YGL015CP33199 130 aa9.11□□□□□ -0.95
PMI40YER003C RSE1Q04693 1361 aaKnown RBP9.1□□□□□ -0.95
PMI40YER003C REB1P21538 810 aa8.91□□□□□ -0.98
PMI40YER003C RPL17AP05740 184 aaKnown RBP8.9□□□□□ -0.98
PMI40YER003C RPL17BP46990 184 aaKnown RBP8.9□□□□□ -0.98
PMI40YER003C BFR2Q06631 534 aaKnown RBP8.83□□□□□ -1
PMI40YER003C CDC27P38042 758 aa8.79□□□□□ -1
PMI40YER003C BUD31P25337 157 aaPredicted RBP8.72□□□□□ -1.01
PMI40YER003C AVT3P36062 692 aa8.66□□□□□ -1.02
PMI40YER003C MAP2P38174 421 aaKnown RBP8.59□□□□□ -1.03
PMI40YER003C YKR023WP36119 530 aaKnown RBP8.55□□□□□ -1.04
PMI40YER003C UBP10P53874 792 aaPredicted RBP8.53□□□□□ -1.04
PMI40YER003C SPT21P35209 758 aa8.46□□□□□ -1.06
PMI40YER003C DCD1P06773 312 aa8.45□□□□□ -1.06
PMI40YER003C HOP09932 586 aa8.42□□□□□ -1.06
PMI40YER003C TFC8Q12308 588 aa8.35□□□□□ -1.07
PMI40YER003C TFA1P36100 482 aa8.32□□□□□ -1.08
PMI40YER003C SCY1P53009 804 aa8.28□□□□□ -1.08
PMI40YER003C SIS1P25294 352 aaKnown RBP8.24□□□□□ -1.09
PMI40YER003C SLX5P32828 619 aaKnown RBP8.17□□□□□ -1.1
PMI40YER003C TIF4632P39936 914 aaKnown RBP8.17□□□□□ -1.1
PMI40YER003C TGL3P40308 642 aa8.14□□□□□ -1.11
PMI40YER003C UBP9P39967 754 aa8.11□□□□□ -1.11
PMI40YER003C BCH2P36122 765 aa8.06□□□□□ -1.12
PMI40YER003C RIM101P33400 625 aa7.95□□□□□ -1.14
PMI40YER003C YBL029C-AQ3E756 94 aa7.82□□□□□ -1.16
PMI40YER003C EPS1P40557 701 aa7.81□□□□□ -1.16
PMI40YER003C BDF1P35817 686 aa7.79□□□□□ -1.16
PMI40YER003C OXP1P28273 1286 aa7.71□□□□□ -1.18
PMI40YER003C MST1P07236 462 aa7.7□□□□□ -1.18
PMI40YER003C YOR238WQ08634 303 aa7.67□□□□□ -1.18
PMI40YER003C VNX1P42839 908 aa7.64□□□□□ -1.19
PMI40YER003C PTP3P40048 928 aa7.62□□□□□ -1.19
PMI40YER003C WSC3Q12215 556 aa7.59□□□□□ -1.19
PMI40YER003C SPP1Q03012 353 aa7.57□□□□□ -1.2
PMI40YER003C RQC2Q12532 1038 aaKnown RBP7.56□□□□□ -1.2
PMI40YER003C YIL055CP40523 627 aaKnown RBP7.54□□□□□ -1.2
PMI40YER003C NSR1P27476 414 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
PMI40YER003C YAP5P40574 245 aa7.52□□□□□ -1.21
PMI40YER003C AIR2Q12476 344 aaKnown RBP7.49□□□□□ -1.21
PMI40YER003C BBC1P47068 1157 aa7.47□□□□□ -1.21
PMI40YER003C AI2P03876 854 aa7.46□□□□□ -1.22
PMI40YER003C FKH1P40466 484 aa7.45□□□□□ -1.22
PMI40YER003C RSM7P47150 247 aa7.44□□□□□ -1.22
PMI40YER003C TIF11P38912 153 aaKnown RBP7.42□□□□□ -1.22
PMI40YER003C YJL171CP46992 396 aa7.42□□□□□ -1.22
PMI40YER003C YAH1Q12184 172 aaKnown RBP7.42□□□□□ -1.22
PMI40YER003C GTT3P39996 337 aa7.39□□□□□ -1.23
PMI40YER003C PIB1Q06651 286 aa7.37□□□□□ -1.23
PMI40YER003C LDB19Q12502 818 aa7.35□□□□□ -1.23
PMI40YER003C ULI1P43604 169 aa7.31□□□□□ -1.24
PMI40YER003C IOC2Q12072 812 aa7.28□□□□□ -1.24
PMI40YER003C BMT6Q12291 365 aa7.27□□□□□ -1.25
PMI40YER003C YLR271WQ06152 274 aa7.22□□□□□ -1.25
PMI40YER003C MRM1P25270 412 aa7.18□□□□□ -1.26
PMI40YER003C SSP1P38871 571 aa7.18□□□□□ -1.26
PMI40YER003C PSD2P53037 1138 aaKnown RBP7.18□□□□□ -1.26
PMI40YER003C SET4P42948 560 aa7.15□□□□□ -1.26
PMI40YER003C RTG1P32607 177 aa7.14□□□□□ -1.27
PMI40YER003C YOL036WQ08206 761 aa7.12□□□□□ -1.27
PMI40YER003C MSB4Q12317 492 aa7.12□□□□□ -1.27
PMI40YER003C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
PMI40YER003C TRP5P00931 707 aaKnown RBP7.11□□□□□ -1.27
PMI40YER003C EAP1P36041 632 aaKnown RBP7.09□□□□□ -1.27
PMI40YER003C NCR1Q12200 1170 aa7.07□□□□□ -1.28
PMI40YER003C YFR006WP43590 535 aa7.06□□□□□ -1.28
PMI40YER003C DBP1P24784 617 aaKnown RBP7.02□□□□□ -1.29
PMI40YER003C YNL035CP53962 389 aaKnown RBP7.02□□□□□ -1.29
PMI40YER003C VPS29P38759 282 aa7□□□□□ -1.29
PMI40YER003C YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29 RIP-Chip
PMI40YER003C VMA1P17255 1071 aaKnown RBP6.99□□□□□ -1.29
PMI40YER003C SEC61P32915 480 aa6.99□□□□□ -1.29
PMI40YER003C DMA1P38823 416 aa6.99□□□□□ -1.29
PMI40YER003C STS1P38637 319 aa6.98□□□□□ -1.29
PMI40YER003C SAP30P38429 201 aa6.95□□□□□ -1.3
PMI40YER003C MGA2P40578 1113 aa6.95□□□□□ -1.3
PMI40YER003C CST9Q06032 482 aa6.95□□□□□ -1.3
PMI40YER003C SAM3Q08986 587 aa6.92□□□□□ -1.3
PMI40YER003C RTG3P38165 486 aa6.9□□□□□ -1.3
PMI40YER003C TFG1P41895 735 aaPredicted RBP6.9□□□□□ -1.3
PMI40YER003C DAN4P47179 1161 aa6.9□□□□□ -1.3
PMI40YER003C BCK2P33306 851 aa6.89□□□□□ -1.31
PMI40YER003C RCR1P38212 213 aa6.89□□□□□ -1.31
PMI40YER003C YDL129WQ07555 291 aa6.84□□□□□ -1.31
PMI40YER003C CHL1P22516 861 aaPredicted RBP6.83□□□□□ -1.32
PMI40YER003C JIP4Q03361 876 aa6.82□□□□□ -1.32
PMI40YER003C GYP5Q12344 894 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms