RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeastyeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC8YEL013W MTC1P47018 478 aaKnown RBP10.11□□□□□ -0.79
VAC8YEL013W DRS1P32892 752 aaKnown RBP9.96□□□□□ -0.82
VAC8YEL013W FAP1P53971 965 aa8.66□□□□□ -1.02
VAC8YEL013W DIP2Q12220 943 aaPredicted RBP8.56□□□□□ -1.04
VAC8YEL013W BFR2Q06631 534 aaKnown RBP8.5□□□□□ -1.05
VAC8YEL013W AVT3P36062 692 aa8.33□□□□□ -1.08
VAC8YEL013W ISW2Q08773 1120 aa8.32□□□□□ -1.08
VAC8YEL013W PRI1P10363 409 aa8.26□□□□□ -1.09
VAC8YEL013W RPG1P38249 964 aaKnown RBP8.22□□□□□ -1.09
VAC8YEL013W AAD16Q02895 342 aa8.17□□□□□ -1.1
VAC8YEL013W RSE1Q04693 1361 aaKnown RBP8.13□□□□□ -1.11
VAC8YEL013W PRY3P47033 881 aa8.09□□□□□ -1.11
VAC8YEL013W TSR3Q12094 313 aaKnown RBP7.86□□□□□ -1.15
VAC8YEL013W RPL17AP05740 184 aaKnown RBP7.85□□□□□ -1.15
VAC8YEL013W RPL17BP46990 184 aaKnown RBP7.85□□□□□ -1.15
VAC8YEL013W REB1P21538 810 aa7.81□□□□□ -1.16
VAC8YEL013W TFA1P36100 482 aa7.78□□□□□ -1.16
VAC8YEL013W HAA1Q12753 694 aaKnown RBP7.6□□□□□ -1.19
VAC8YEL013W MRPL32P25348 183 aa7.58□□□□□ -1.2
VAC8YEL013W YCK3P39962 524 aa7.55□□□□□ -1.2
VAC8YEL013W SPT21P35209 758 aa7.48□□□□□ -1.21
VAC8YEL013W RIM101P33400 625 aa7.35□□□□□ -1.23
VAC8YEL013W YKR023WP36119 530 aaKnown RBP7.32□□□□□ -1.24
VAC8YEL013W CDC27P38042 758 aa7.23□□□□□ -1.25
VAC8YEL013W MON2P48563 1636 aaPredicted RBP7.22□□□□□ -1.25
VAC8YEL013W HOP09932 586 aa7.21□□□□□ -1.26
VAC8YEL013W INO80P53115 1489 aa7.19□□□□□ -1.26
VAC8YEL013W TFC8Q12308 588 aa7.18□□□□□ -1.26
VAC8YEL013W DCD1P06773 312 aa7.17□□□□□ -1.26
VAC8YEL013W YGL015CP33199 130 aa7.13□□□□□ -1.27
VAC8YEL013W OXP1P28273 1286 aa7.12□□□□□ -1.27
VAC8YEL013W YIL055CP40523 627 aaKnown RBP7.1□□□□□ -1.27
VAC8YEL013W PTP3P40048 928 aa7.05□□□□□ -1.28
VAC8YEL013W YAH1Q12184 172 aaKnown RBP7.04□□□□□ -1.28
VAC8YEL013W BCH2P36122 765 aa6.98□□□□□ -1.29
VAC8YEL013W MAP2P38174 421 aaKnown RBP6.96□□□□□ -1.29
VAC8YEL013W UBP10P53874 792 aaPredicted RBP6.96□□□□□ -1.29
VAC8YEL013W SSP1P38871 571 aa6.95□□□□□ -1.3
VAC8YEL013W RSM7P47150 247 aa6.93□□□□□ -1.3
VAC8YEL013W SCY1P53009 804 aa6.93□□□□□ -1.3
VAC8YEL013W YLR271WQ06152 274 aa6.89□□□□□ -1.31
VAC8YEL013W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
VAC8YEL013W DNA2P38859 1522 aa6.85□□□□□ -1.31
VAC8YEL013W AI2P03876 854 aa6.84□□□□□ -1.31
VAC8YEL013W BBC1P47068 1157 aa6.84□□□□□ -1.31
VAC8YEL013W EPS1P40557 701 aa6.83□□□□□ -1.32
VAC8YEL013W SLX5P32828 619 aaKnown RBP6.81□□□□□ -1.32
VAC8YEL013W BDF1P35817 686 aa6.8□□□□□ -1.32
VAC8YEL013W TIF4632P39936 914 aaKnown RBP6.73□□□□□ -1.33
VAC8YEL013W MGA2P40578 1113 aa6.73□□□□□ -1.33
VAC8YEL013W PSD2P53037 1138 aaKnown RBP6.71□□□□□ -1.34
VAC8YEL013W SWR1Q05471 1514 aa6.7□□□□□ -1.34
VAC8YEL013W KOG1P38873 1557 aa6.69□□□□□ -1.34
VAC8YEL013W CST9Q06032 482 aa6.67□□□□□ -1.34
VAC8YEL013W TGL3P40308 642 aa6.66□□□□□ -1.34
VAC8YEL013W MRM1P25270 412 aa6.62□□□□□ -1.35
VAC8YEL013W RTG3P38165 486 aa6.53□□□□□ -1.36
VAC8YEL013W TY1B-DR4Q07793 1604 aa6.48□□□□□ -1.37
VAC8YEL013W YAP5P40574 245 aa6.47□□□□□ -1.37
VAC8YEL013W TCB3Q03640 1545 aaKnown RBP6.47□□□□□ -1.37
VAC8YEL013W RCR1P38212 213 aa6.46□□□□□ -1.38
VAC8YEL013W YOR238WQ08634 303 aa6.46□□□□□ -1.38
VAC8YEL013W NSR1P27476 414 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
VAC8YEL013W VPS29P38759 282 aa6.44□□□□□ -1.38
VAC8YEL013W SPA2P23201 1466 aaKnown RBP6.43□□□□□ -1.38
VAC8YEL013W BUD31P25337 157 aaPredicted RBP6.42□□□□□ -1.38
VAC8YEL013W YMR1P47147 688 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
VAC8YEL013W RQC2Q12532 1038 aaKnown RBP6.41□□□□□ -1.38
VAC8YEL013W MST1P07236 462 aa6.4□□□□□ -1.38
VAC8YEL013W PIB1Q06651 286 aa6.4□□□□□ -1.38
VAC8YEL013W DBP1P24784 617 aaKnown RBP6.39□□□□□ -1.39
VAC8YEL013W RAM2P29703 316 aa6.38□□□□□ -1.39
VAC8YEL013W YFR006WP43590 535 aa6.38□□□□□ -1.39
VAC8YEL013W DMA1P38823 416 aa6.36□□□□□ -1.39
VAC8YEL013W STS1P38637 319 aa6.35□□□□□ -1.39
VAC8YEL013W UBP9P39967 754 aa6.35□□□□□ -1.39
VAC8YEL013W GTT3P39996 337 aa6.33□□□□□ -1.4
VAC8YEL013W MAK11P20484 414 aaKnown RBP6.32□□□□□ -1.4
VAC8YEL013W MIF2P35201 549 aa6.28□□□□□ -1.4
VAC8YEL013W WSC3Q12215 556 aa6.27□□□□□ -1.41
VAC8YEL013W VMA1P17255 1071 aaKnown RBP6.26□□□□□ -1.41
VAC8YEL013W YBL029C-AQ3E756 94 aa6.26□□□□□ -1.41
VAC8YEL013W COQ8P27697 501 aa6.24□□□□□ -1.41
VAC8YEL013W SET1P38827 1080 aaKnown RBP6.22□□□□□ -1.41
VAC8YEL013W VNX1P42839 908 aa6.22□□□□□ -1.41
VAC8YEL013W ECM5Q03214 1411 aa6.21□□□□□ -1.42
VAC8YEL013W SET4P42948 560 aa6.19□□□□□ -1.42
VAC8YEL013W EDS1P38073 919 aa6.19□□□□□ -1.42
VAC8YEL013W SPP1Q03012 353 aa6.19□□□□□ -1.42
VAC8YEL013W SAM3Q08986 587 aa6.18□□□□□ -1.42
VAC8YEL013W PTC3P34221 468 aaKnown RBP6.17□□□□□ -1.42
VAC8YEL013W YOL036WQ08206 761 aa6.17□□□□□ -1.42
VAC8YEL013W GYP5Q12344 894 aa6.16□□□□□ -1.42
VAC8YEL013W MSB4Q12317 492 aa6.16□□□□□ -1.42
VAC8YEL013W HSL1P34244 1518 aa6.15□□□□□ -1.42
VAC8YEL013W SPT6P23615 1451 aaKnown RBP6.15□□□□□ -1.42
VAC8YEL013W NOP53Q12080 455 aaKnown RBP6.15□□□□□ -1.42
VAC8YEL013W TIF11P38912 153 aaKnown RBP6.14□□□□□ -1.43
VAC8YEL013W ATH1P48016 1211 aa6.14□□□□□ -1.43
VAC8YEL013W GRE2Q12068 342 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms