RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	MTC1	P47018	478 aa	Known RBP	18.23	■□□□□ 0.51
YEA4	YEL004W	DRS1	P32892	752 aa	Known RBP	17.06	■□□□□ 0.32
YEA4	YEL004W	FAP1	P53971	965 aa		16.38	■□□□□ 0.21
YEA4	YEL004W	PRY3	P47033	881 aa		15.41	■□□□□ 0.06
YEA4	YEL004W	PRI1	P10363	409 aa		15.37	■□□□□ 0.05
YEA4	YEL004W	AAD16	Q02895	342 aa		15.25	■□□□□ 0.03
YEA4	YEL004W	ISW2	Q08773	1120 aa		15.06	■□□□□ 0
YEA4	YEL004W	RPG1	P38249	964 aa	Known RBP	14.96	□□□□□ -0.01
YEA4	YEL004W	DIP2	Q12220	943 aa	Predicted RBP	14.95	□□□□□ -0.02
YEA4	YEL004W	YCK3	P39962	524 aa		14.65	□□□□□ -0.06
YEA4	YEL004W	TSR3	Q12094	313 aa	Known RBP	14.56	□□□□□ -0.08
YEA4	YEL004W	AVT3	P36062	692 aa		14.43	□□□□□ -0.1
YEA4	YEL004W	RSE1	Q04693	1361 aa	Known RBP	14.42	□□□□□ -0.1
YEA4	YEL004W	HAA1	Q12753	694 aa	Known RBP	14.4	□□□□□ -0.1
YEA4	YEL004W	BFR2	Q06631	534 aa	Known RBP	14.17	□□□□□ -0.14
YEA4	YEL004W	RPL17A	P05740	184 aa	Known RBP	13.99	□□□□□ -0.17
YEA4	YEL004W	RPL17B	P46990	184 aa	Known RBP	13.99	□□□□□ -0.17
YEA4	YEL004W	MRPL32	P25348	183 aa		13.92	□□□□□ -0.18
YEA4	YEL004W	REB1	P21538	810 aa		13.89	□□□□□ -0.19
YEA4	YEL004W	SPT21	P35209	758 aa		13.42	□□□□□ -0.26
YEA4	YEL004W	YGL015C	P33199	130 aa		13.32	□□□□□ -0.28
YEA4	YEL004W	CDC27	P38042	758 aa		13.31	□□□□□ -0.28
YEA4	YEL004W	YKR023W	P36119	530 aa	Known RBP	13.27	□□□□□ -0.29
YEA4	YEL004W	HO	P09932	586 aa		13.01	□□□□□ -0.33
YEA4	YEL004W	DCD1	P06773	312 aa		12.98	□□□□□ -0.33
YEA4	YEL004W	TFC8	Q12308	588 aa		12.97	□□□□□ -0.33
YEA4	YEL004W	RIM101	P33400	625 aa		12.93	□□□□□ -0.34
YEA4	YEL004W	MAP2	P38174	421 aa	Known RBP	12.87	□□□□□ -0.35
YEA4	YEL004W	UBP10	P53874	792 aa	Predicted RBP	12.83	□□□□□ -0.36
YEA4	YEL004W	SCY1	P53009	804 aa		12.61	□□□□□ -0.39
YEA4	YEL004W	BCH2	P36122	765 aa		12.56	□□□□□ -0.4
YEA4	YEL004W	OXP1	P28273	1286 aa		12.54	□□□□□ -0.4
YEA4	YEL004W	TFA1	P36100	482 aa		12.47	□□□□□ -0.41
YEA4	YEL004W	SLX5	P32828	619 aa	Known RBP	12.4	□□□□□ -0.42
YEA4	YEL004W	BUD31	P25337	157 aa	Predicted RBP	12.32	□□□□□ -0.44
YEA4	YEL004W	TIF4632	P39936	914 aa	Known RBP	12.28	□□□□□ -0.44
YEA4	YEL004W	PTP3	P40048	928 aa		12.28	□□□□□ -0.44
YEA4	YEL004W	YIL055C	P40523	627 aa	Known RBP	12.26	□□□□□ -0.45
YEA4	YEL004W	TGL3	P40308	642 aa		12.25	□□□□□ -0.45
YEA4	YEL004W	EPS1	P40557	701 aa		12.25	□□□□□ -0.45
YEA4	YEL004W	BDF1	P35817	686 aa		12.19	□□□□□ -0.46
YEA4	YEL004W	YAH1	Q12184	172 aa	Known RBP	12.15	□□□□□ -0.46
YEA4	YEL004W	RSM7	P47150	247 aa		12.11	□□□□□ -0.47
YEA4	YEL004W	AI2	P03876	854 aa		12.01	□□□□□ -0.49
YEA4	YEL004W	BBC1	P47068	1157 aa		11.97	□□□□□ -0.49
YEA4	YEL004W	YLR271W	Q06152	274 aa		11.95	□□□□□ -0.5
YEA4	YEL004W	UBP9	P39967	754 aa		11.83	□□□□□ -0.52
YEA4	YEL004W	SSP1	P38871	571 aa		11.76	□□□□□ -0.53
YEA4	YEL004W	PSD2	P53037	1138 aa	Known RBP	11.76	□□□□□ -0.53
YEA4	YEL004W	MST1	P07236	462 aa		11.75	□□□□□ -0.53
YEA4	YEL004W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.71	□□□□□ -0.53	not detected
YEA4	YEL004W	YOR238W	Q08634	303 aa		11.71	□□□□□ -0.53
YEA4	YEL004W	YAP5	P40574	245 aa		11.64	□□□□□ -0.55
YEA4	YEL004W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.64	□□□□□ -0.55	not detected
YEA4	YEL004W	SIS1	P25294	352 aa	Known RBP	11.63	□□□□□ -0.55
YEA4	YEL004W	YBL029C-A	Q3E756	94 aa		11.61	□□□□□ -0.55
YEA4	YEL004W	MRM1	P25270	412 aa		11.6	□□□□□ -0.55
YEA4	YEL004W	CST9	Q06032	482 aa		11.55	□□□□□ -0.56
YEA4	YEL004W	MGA2	P40578	1113 aa		11.46	□□□□□ -0.57
YEA4	YEL004W	VNX1	P42839	908 aa		11.46	□□□□□ -0.57
YEA4	YEL004W	PIB1	Q06651	286 aa		11.46	□□□□□ -0.57
YEA4	YEL004W	WSC3	Q12215	556 aa		11.44	□□□□□ -0.58
YEA4	YEL004W	GTT3	P39996	337 aa		11.36	□□□□□ -0.59
YEA4	YEL004W	VPS29	P38759	282 aa		11.34	□□□□□ -0.59
YEA4	YEL004W	SPP1	Q03012	353 aa		11.34	□□□□□ -0.59
YEA4	YEL004W	RTG3	P38165	486 aa		11.3	□□□□□ -0.6
YEA4	YEL004W	RCR1	P38212	213 aa		11.3	□□□□□ -0.6
YEA4	YEL004W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.28	□□□□□ -0.6	not detected
YEA4	YEL004W	YFR006W	P43590	535 aa		11.26	□□□□□ -0.61
YEA4	YEL004W	DBP1	P24784	617 aa	Known RBP	11.25	□□□□□ -0.61
YEA4	YEL004W	TIF11	P38912	153 aa	Known RBP	11.24	□□□□□ -0.61
YEA4	YEL004W	STS1	P38637	319 aa		11.23	□□□□□ -0.61
YEA4	YEL004W	ULI1	P43604	169 aa		11.13	□□□□□ -0.63
YEA4	YEL004W	VMA1	P17255	1071 aa	Known RBP	11.12	□□□□□ -0.63
YEA4	YEL004W	YOL036W	Q08206	761 aa		11.11	□□□□□ -0.63
YEA4	YEL004W	IOC2	Q12072	812 aa		11.11	□□□□□ -0.63
YEA4	YEL004W	SET4	P42948	560 aa		11.1	□□□□□ -0.63
YEA4	YEL004W	FKH1	P40466	484 aa		11.09	□□□□□ -0.63
YEA4	YEL004W	AIR2	Q12476	344 aa	Known RBP	11.09	□□□□□ -0.63
YEA4	YEL004W	LDB19	Q12502	818 aa		11.09	□□□□□ -0.63
YEA4	YEL004W	MSB4	Q12317	492 aa		11.08	□□□□□ -0.64
YEA4	YEL004W	SAM3	Q08986	587 aa		11.03	□□□□□ -0.64
YEA4	YEL004W	TRP5	P00931	707 aa	Known RBP	10.99	□□□□□ -0.65
YEA4	YEL004W	EAP1	P36041	632 aa	Known RBP	10.99	□□□□□ -0.65
YEA4	YEL004W	RAM2	P29703	316 aa		10.94	□□□□□ -0.66
YEA4	YEL004W	RTG1	P32607	177 aa		10.91	□□□□□ -0.66
YEA4	YEL004W	YJL171C	P46992	396 aa		10.91	□□□□□ -0.66
YEA4	YEL004W	GYP5	Q12344	894 aa		10.87	□□□□□ -0.67
YEA4	YEL004W	MAK11	P20484	414 aa	Known RBP	10.84	□□□□□ -0.67
YEA4	YEL004W	YNL035C	P53962	389 aa	Known RBP	10.84	□□□□□ -0.67
YEA4	YEL004W	DCW1	P36091	449 aa		10.81	□□□□□ -0.68
YEA4	YEL004W	BMT6	Q12291	365 aa		10.81	□□□□□ -0.68
YEA4	YEL004W	NCR1	Q12200	1170 aa		10.8	□□□□□ -0.68
YEA4	YEL004W	MIF2	P35201	549 aa		10.79	□□□□□ -0.68
YEA4	YEL004W	EDS1	P38073	919 aa		10.79	□□□□□ -0.68
YEA4	YEL004W	ABP1	P15891	592 aa	Known RBP	10.77	□□□□□ -0.69
YEA4	YEL004W	SEC61	P32915	480 aa		10.77	□□□□□ -0.69
YEA4	YEL004W	HTA1	P04911	132 aa	Known RBP	10.76	□□□□□ -0.69
YEA4	YEL004W	HTA2	P04912	132 aa		10.76	□□□□□ -0.69
YEA4	YEL004W	DAN4	P47179	1161 aa		10.76	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms