RNA–Protein interactions for RNA: YEL003W

GIM4, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeastyeast

Gene GIM4, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GIM4YEL003W MTC1P47018 478 aaKnown RBP16.25■□□□□ 0.19
GIM4YEL003W FAP1P53971 965 aa15.22■□□□□ 0.03
GIM4YEL003W DRS1P32892 752 aaKnown RBP14.67□□□□□ -0.06
GIM4YEL003W PRY3P47033 881 aa14.36□□□□□ -0.11
GIM4YEL003W PRI1P10363 409 aa13.96□□□□□ -0.17
GIM4YEL003W AAD16Q02895 342 aa13.93□□□□□ -0.18
GIM4YEL003W YCK3P39962 524 aa13.6□□□□□ -0.23
GIM4YEL003W ISW2Q08773 1120 aa13.56□□□□□ -0.24
GIM4YEL003W HAA1Q12753 694 aaKnown RBP13.5□□□□□ -0.25
GIM4YEL003W RPG1P38249 964 aaKnown RBP13.42□□□□□ -0.26
GIM4YEL003W TSR3Q12094 313 aaKnown RBP13.13□□□□□ -0.31
GIM4YEL003W DIP2Q12220 943 aaPredicted RBP13.05□□□□□ -0.32
GIM4YEL003W RSE1Q04693 1361 aaKnown RBP12.76□□□□□ -0.37
GIM4YEL003W MRPL32P25348 183 aa12.64□□□□□ -0.39
GIM4YEL003W AVT3P36062 692 aa12.47□□□□□ -0.41
GIM4YEL003W RPL17AP05740 184 aaKnown RBP12.36□□□□□ -0.43
GIM4YEL003W RPL17BP46990 184 aaKnown RBP12.36□□□□□ -0.43
GIM4YEL003W REB1P21538 810 aa12.34□□□□□ -0.43
GIM4YEL003W YGL015CP33199 130 aa12.32□□□□□ -0.44
GIM4YEL003W BFR2Q06631 534 aaKnown RBP11.99□□□□□ -0.49
GIM4YEL003W CDC27P38042 758 aa11.93□□□□□ -0.5
GIM4YEL003W SPT21P35209 758 aa11.84□□□□□ -0.51
GIM4YEL003W YKR023WP36119 530 aaKnown RBP11.79□□□□□ -0.52
GIM4YEL003W BUD31P25337 157 aaPredicted RBP11.75□□□□□ -0.53
GIM4YEL003W UBP10P53874 792 aaPredicted RBP11.69□□□□□ -0.54
GIM4YEL003W MAP2P38174 421 aaKnown RBP11.61□□□□□ -0.55
GIM4YEL003W TFC8Q12308 588 aa11.56□□□□□ -0.56
GIM4YEL003W HOP09932 586 aa11.52□□□□□ -0.57
GIM4YEL003W DCD1P06773 312 aa11.47□□□□□ -0.57
GIM4YEL003W RIM101P33400 625 aa11.31□□□□□ -0.6
GIM4YEL003W SCY1P53009 804 aa11.29□□□□□ -0.6
GIM4YEL003W SLX5P32828 619 aaKnown RBP11.19□□□□□ -0.62
GIM4YEL003W TIF4632P39936 914 aaKnown RBP11.19□□□□□ -0.62
GIM4YEL003W TGL3P40308 642 aa11.17□□□□□ -0.62
GIM4YEL003W BCH2P36122 765 aa11.15□□□□□ -0.62
GIM4YEL003W SIS1P25294 352 aaKnown RBP11.04□□□□□ -0.64
GIM4YEL003W UBP9P39967 754 aa11.02□□□□□ -0.65
GIM4YEL003W OXP1P28273 1286 aa10.9□□□□□ -0.66
GIM4YEL003W EPS1P40557 701 aa10.85□□□□□ -0.67
GIM4YEL003W BDF1P35817 686 aa10.81□□□□□ -0.68
GIM4YEL003W PTP3P40048 928 aa10.74□□□□□ -0.69
GIM4YEL003W YIL055CP40523 627 aaKnown RBP10.72□□□□□ -0.69
GIM4YEL003W MST1P07236 462 aa10.67□□□□□ -0.7
GIM4YEL003W RSM7P47150 247 aa10.59□□□□□ -0.71
GIM4YEL003W NSR1P27476 414 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
GIM4YEL003W YOR238WQ08634 303 aa10.58□□□□□ -0.72
GIM4YEL003W BBC1P47068 1157 aa10.57□□□□□ -0.72
GIM4YEL003W AI2P03876 854 aa10.53□□□□□ -0.72
GIM4YEL003W YBL029C-AQ3E756 94 aa10.51□□□□□ -0.73
GIM4YEL003W YAH1Q12184 172 aaKnown RBP10.48□□□□□ -0.73
GIM4YEL003W YAP5P40574 245 aa10.45□□□□□ -0.74
GIM4YEL003W VNX1P42839 908 aa10.4□□□□□ -0.74
GIM4YEL003W TFA1P36100 482 aa10.39□□□□□ -0.75
GIM4YEL003W YLR271WQ06152 274 aa10.33□□□□□ -0.76
GIM4YEL003W SPP1Q03012 353 aa10.3□□□□□ -0.76
GIM4YEL003W WSC3Q12215 556 aa10.27□□□□□ -0.77
GIM4YEL003W PSD2P53037 1138 aaKnown RBP10.26□□□□□ -0.77
GIM4YEL003W GTT3P39996 337 aa10.21□□□□□ -0.77
GIM4YEL003W TIF11P38912 153 aaKnown RBP10.19□□□□□ -0.78
GIM4YEL003W FKH1P40466 484 aa10.14□□□□□ -0.79
GIM4YEL003W AIR2Q12476 344 aaKnown RBP10.14□□□□□ -0.79
GIM4YEL003W MRM1P25270 412 aa10.11□□□□□ -0.79
GIM4YEL003W PIB1Q06651 286 aa10.08□□□□□ -0.8
GIM4YEL003W SSP1P38871 571 aa10.07□□□□□ -0.8
GIM4YEL003W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
GIM4YEL003W ULI1P43604 169 aa10.03□□□□□ -0.8
GIM4YEL003W YJL171CP46992 396 aa10.03□□□□□ -0.8
GIM4YEL003W IOC2Q12072 812 aa10.02□□□□□ -0.81
GIM4YEL003W LDB19Q12502 818 aa10.02□□□□□ -0.81
GIM4YEL003W MSB4Q12317 492 aa9.99□□□□□ -0.81
GIM4YEL003W YMR1P47147 688 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
GIM4YEL003W EAP1P36041 632 aaKnown RBP9.93□□□□□ -0.82
GIM4YEL003W CST9Q06032 482 aa9.93□□□□□ -0.82
GIM4YEL003W VPS29P38759 282 aa9.92□□□□□ -0.82
GIM4YEL003W MGA2P40578 1113 aa9.9□□□□□ -0.82
GIM4YEL003W YOL036WQ08206 761 aa9.9□□□□□ -0.82
GIM4YEL003W BMT6Q12291 365 aa9.9□□□□□ -0.82
GIM4YEL003W DBP1P24784 617 aaKnown RBP9.89□□□□□ -0.83
GIM4YEL003W RTG3P38165 486 aa9.88□□□□□ -0.83
GIM4YEL003W SET4P42948 560 aa9.86□□□□□ -0.83
GIM4YEL003W TRP5P00931 707 aaKnown RBP9.83□□□□□ -0.84
GIM4YEL003W STS1P38637 319 aa9.83□□□□□ -0.84
GIM4YEL003W VMA1P17255 1071 aaKnown RBP9.82□□□□□ -0.84
GIM4YEL003W RTG1P32607 177 aa9.82□□□□□ -0.84
GIM4YEL003W YFR006WP43590 535 aa9.82□□□□□ -0.84
GIM4YEL003W SAM3Q08986 587 aa9.81□□□□□ -0.84
GIM4YEL003W YNL035CP53962 389 aaKnown RBP9.76□□□□□ -0.85
GIM4YEL003W NCR1Q12200 1170 aa9.76□□□□□ -0.85
GIM4YEL003W SEC61P32915 480 aa9.74□□□□□ -0.85
GIM4YEL003W RCR1P38212 213 aa9.73□□□□□ -0.85
GIM4YEL003W ABP1P15891 592 aaKnown RBP9.66□□□□□ -0.86
GIM4YEL003W DAN4P47179 1161 aa9.63□□□□□ -0.87
GIM4YEL003W JIP4Q03361 876 aa9.62□□□□□ -0.87
GIM4YEL003W GYP5Q12344 894 aa9.62□□□□□ -0.87
GIM4YEL003W TFG1P41895 735 aaPredicted RBP9.6□□□□□ -0.87
GIM4YEL003W HTA1P04911 132 aaKnown RBP9.56□□□□□ -0.88
GIM4YEL003W HTA2P04912 132 aa9.56□□□□□ -0.88
GIM4YEL003W DCW1P36091 449 aa9.53□□□□□ -0.88
GIM4YEL003W SAP30P38429 201 aa9.53□□□□□ -0.88
GIM4YEL003W YDL129WQ07555 291 aa9.52□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms