RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeastyeast

Gene IRC4, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC4YDR540C MTC1P47018 478 aaKnown RBP10.11□□□□□ -0.79
IRC4YDR540C FAP1P53971 965 aa9.38□□□□□ -0.91
IRC4YDR540C DRS1P32892 752 aaKnown RBP9.28□□□□□ -0.92
IRC4YDR540C PRY3P47033 881 aa8.78□□□□□ -1
IRC4YDR540C AAD16Q02895 342 aa8.65□□□□□ -1.02
IRC4YDR540C PRI1P10363 409 aa8.64□□□□□ -1.03
IRC4YDR540C ISW2Q08773 1120 aa8.48□□□□□ -1.05
IRC4YDR540C RPG1P38249 964 aaKnown RBP8.37□□□□□ -1.07
IRC4YDR540C HAA1Q12753 694 aaKnown RBP8.27□□□□□ -1.09
IRC4YDR540C DIP2Q12220 943 aaPredicted RBP8.22□□□□□ -1.09
IRC4YDR540C YCK3P39962 524 aa8.17□□□□□ -1.1
IRC4YDR540C TSR3Q12094 313 aaKnown RBP8.16□□□□□ -1.1
IRC4YDR540C RSE1Q04693 1361 aaKnown RBP8□□□□□ -1.13
IRC4YDR540C MRPL32P25348 183 aa7.9□□□□□ -1.14
IRC4YDR540C AVT3P36062 692 aa7.81□□□□□ -1.16
IRC4YDR540C REB1P21538 810 aa7.76□□□□□ -1.17
IRC4YDR540C RPL17AP05740 184 aaKnown RBP7.74□□□□□ -1.17
IRC4YDR540C RPL17BP46990 184 aaKnown RBP7.74□□□□□ -1.17
IRC4YDR540C YGL015CP33199 130 aa7.64□□□□□ -1.19
IRC4YDR540C BFR2Q06631 534 aaKnown RBP7.63□□□□□ -1.19
IRC4YDR540C CDC27P38042 758 aa7.37□□□□□ -1.23
IRC4YDR540C SPT21P35209 758 aa7.32□□□□□ -1.24
IRC4YDR540C YKR023WP36119 530 aaKnown RBP7.32□□□□□ -1.24
IRC4YDR540C UBP10P53874 792 aaPredicted RBP7.23□□□□□ -1.25
IRC4YDR540C HOP09932 586 aa7.19□□□□□ -1.26
IRC4YDR540C MAP2P38174 421 aaKnown RBP7.19□□□□□ -1.26
IRC4YDR540C TFC8Q12308 588 aa7.19□□□□□ -1.26
IRC4YDR540C DCD1P06773 312 aa7.13□□□□□ -1.27
IRC4YDR540C RIM101P33400 625 aa7.08□□□□□ -1.28
IRC4YDR540C SCY1P53009 804 aa7.03□□□□□ -1.28
IRC4YDR540C BUD31P25337 157 aaPredicted RBP7.02□□□□□ -1.29
IRC4YDR540C TIF4632P39936 914 aaKnown RBP7□□□□□ -1.29
IRC4YDR540C TFA1P36100 482 aa6.98□□□□□ -1.29
IRC4YDR540C SLX5P32828 619 aaKnown RBP6.97□□□□□ -1.29
IRC4YDR540C BCH2P36122 765 aa6.95□□□□□ -1.3
IRC4YDR540C TGL3P40308 642 aa6.95□□□□□ -1.3
IRC4YDR540C UBP9P39967 754 aa6.84□□□□□ -1.31
IRC4YDR540C YIL055CP40523 627 aaKnown RBP6.83□□□□□ -1.32
IRC4YDR540C OXP1P28273 1286 aa6.82□□□□□ -1.32
IRC4YDR540C PTP3P40048 928 aa6.78□□□□□ -1.32
IRC4YDR540C EPS1P40557 701 aa6.76□□□□□ -1.33
IRC4YDR540C BDF1P35817 686 aa6.74□□□□□ -1.33
IRC4YDR540C SIS1P25294 352 aaKnown RBP6.73□□□□□ -1.33
IRC4YDR540C BBC1P47068 1157 aa6.68□□□□□ -1.34
IRC4YDR540C RSM7P47150 247 aa6.67□□□□□ -1.34
IRC4YDR540C YAH1Q12184 172 aaKnown RBP6.63□□□□□ -1.35
IRC4YDR540C YOR238WQ08634 303 aa6.62□□□□□ -1.35
IRC4YDR540C AI2P03876 854 aa6.61□□□□□ -1.35
IRC4YDR540C MST1P07236 462 aa6.6□□□□□ -1.35
IRC4YDR540C NSR1P27476 414 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
IRC4YDR540C YAP5P40574 245 aa6.53□□□□□ -1.36
IRC4YDR540C YBL029C-AQ3E756 94 aa6.5□□□□□ -1.37
IRC4YDR540C YLR271WQ06152 274 aa6.48□□□□□ -1.37
IRC4YDR540C VNX1P42839 908 aa6.46□□□□□ -1.38
IRC4YDR540C SPP1Q03012 353 aa6.43□□□□□ -1.38
IRC4YDR540C WSC3Q12215 556 aa6.42□□□□□ -1.38
IRC4YDR540C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
IRC4YDR540C GTT3P39996 337 aa6.41□□□□□ -1.38
IRC4YDR540C SSP1P38871 571 aa6.39□□□□□ -1.39
IRC4YDR540C PSD2P53037 1138 aaKnown RBP6.39□□□□□ -1.39
IRC4YDR540C MRM1P25270 412 aa6.36□□□□□ -1.39
IRC4YDR540C TIF11P38912 153 aaKnown RBP6.34□□□□□ -1.39
IRC4YDR540C PIB1Q06651 286 aa6.31□□□□□ -1.4
IRC4YDR540C YJL171CP46992 396 aa6.3□□□□□ -1.4
IRC4YDR540C ULI1P43604 169 aa6.27□□□□□ -1.41
IRC4YDR540C MGA2P40578 1113 aa6.26□□□□□ -1.41
IRC4YDR540C RTG3P38165 486 aa6.25□□□□□ -1.41
IRC4YDR540C YMR1P47147 688 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
IRC4YDR540C AIR2Q12476 344 aaKnown RBP6.24□□□□□ -1.41
IRC4YDR540C EAP1P36041 632 aaKnown RBP6.23□□□□□ -1.41
IRC4YDR540C MSB4Q12317 492 aa6.23□□□□□ -1.41
IRC4YDR540C LDB19Q12502 818 aa6.23□□□□□ -1.41
IRC4YDR540C DBP1P24784 617 aaKnown RBP6.22□□□□□ -1.41
IRC4YDR540C CST9Q06032 482 aa6.22□□□□□ -1.41
IRC4YDR540C IOC2Q12072 812 aa6.22□□□□□ -1.41
IRC4YDR540C FKH1P40466 484 aa6.21□□□□□ -1.42
IRC4YDR540C VPS29P38759 282 aa6.2□□□□□ -1.42
IRC4YDR540C SET4P42948 560 aa6.17□□□□□ -1.42
IRC4YDR540C YFR006WP43590 535 aa6.17□□□□□ -1.42
IRC4YDR540C BMT6Q12291 365 aa6.16□□□□□ -1.42
IRC4YDR540C YOL036WQ08206 761 aa6.15□□□□□ -1.42
IRC4YDR540C TRP5P00931 707 aaKnown RBP6.13□□□□□ -1.43
IRC4YDR540C VMA1P17255 1071 aaKnown RBP6.13□□□□□ -1.43
IRC4YDR540C NCR1Q12200 1170 aa6.13□□□□□ -1.43
IRC4YDR540C RTG1P32607 177 aa6.12□□□□□ -1.43
IRC4YDR540C STS1P38637 319 aa6.12□□□□□ -1.43
IRC4YDR540C YNL035CP53962 389 aaKnown RBP6.1□□□□□ -1.43
IRC4YDR540C SAM3Q08986 587 aa6.1□□□□□ -1.43
IRC4YDR540C TFG1P41895 735 aaPredicted RBP6.09□□□□□ -1.43
IRC4YDR540C SEC61P32915 480 aa6.08□□□□□ -1.44
IRC4YDR540C RCR1P38212 213 aa6.08□□□□□ -1.44
IRC4YDR540C GYP5Q12344 894 aa6.05□□□□□ -1.44
IRC4YDR540C ABP1P15891 592 aaKnown RBP6.04□□□□□ -1.44
IRC4YDR540C JIP4Q03361 876 aa6.03□□□□□ -1.44
IRC4YDR540C HTA1P04911 132 aaKnown RBP6.01□□□□□ -1.45
IRC4YDR540C HTA2P04912 132 aa6.01□□□□□ -1.45
IRC4YDR540C DCW1P36091 449 aa6□□□□□ -1.45
IRC4YDR540C PTC4P38089 393 aa5.98□□□□□ -1.45
IRC4YDR540C DAN4P47179 1161 aa5.98□□□□□ -1.45
IRC4YDR540C SAP30P38429 201 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms