RNA–Protein interactions for RNA: YDR532C

KRE28, Transcript of Subunit of a kinetochore-microtubule binding complex, yeastyeast

Gene KRE28, Length 1,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRE28YDR532C MTC1P47018 478 aaKnown RBP18.46■□□□□ 0.55
KRE28YDR532C DRS1P32892 752 aaKnown RBP17.04■□□□□ 0.32
KRE28YDR532C FAP1P53971 965 aa16.81■□□□□ 0.28
KRE28YDR532C PRY3P47033 881 aa15.8■□□□□ 0.12
KRE28YDR532C PRI1P10363 409 aa15.67■□□□□ 0.1
KRE28YDR532C AAD16Q02895 342 aa15.6■□□□□ 0.09
KRE28YDR532C ISW2Q08773 1120 aa15.35■□□□□ 0.05
KRE28YDR532C RPG1P38249 964 aaKnown RBP15.17■□□□□ 0.02
KRE28YDR532C DIP2Q12220 943 aaPredicted RBP15.01□□□□□ -0.01
KRE28YDR532C YCK3P39962 524 aa14.91□□□□□ -0.02
KRE28YDR532C HAA1Q12753 694 aaKnown RBP14.84□□□□□ -0.03
KRE28YDR532C TSR3Q12094 313 aaKnown RBP14.78□□□□□ -0.04
KRE28YDR532C RSE1Q04693 1361 aaKnown RBP14.57□□□□□ -0.08
KRE28YDR532C AVT3P36062 692 aa14.42□□□□□ -0.1
KRE28YDR532C MRPL32P25348 183 aa14.22□□□□□ -0.13
KRE28YDR532C RPL17AP05740 184 aaKnown RBP14.11□□□□□ -0.15
KRE28YDR532C RPL17BP46990 184 aaKnown RBP14.11□□□□□ -0.15
KRE28YDR532C REB1P21538 810 aa14.07□□□□□ -0.16
KRE28YDR532C BFR2Q06631 534 aaKnown RBP14.07□□□□□ -0.16
KRE28YDR532C YGL015CP33199 130 aa13.7□□□□□ -0.22
KRE28YDR532C SPT21P35209 758 aa13.51□□□□□ -0.25
KRE28YDR532C CDC27P38042 758 aa13.47□□□□□ -0.25
KRE28YDR532C YKR023WP36119 530 aaKnown RBP13.39□□□□□ -0.27
KRE28YDR532C UBP10P53874 792 aaPredicted RBP13.14□□□□□ -0.31
KRE28YDR532C TFC8Q12308 588 aa13.13□□□□□ -0.31
KRE28YDR532C HOP09932 586 aa13.1□□□□□ -0.31
KRE28YDR532C MAP2P38174 421 aaKnown RBP13.07□□□□□ -0.32
KRE28YDR532C DCD1P06773 312 aa13.04□□□□□ -0.32
KRE28YDR532C RIM101P33400 625 aa12.99□□□□□ -0.33
KRE28YDR532C SCY1P53009 804 aa12.78□□□□□ -0.36
KRE28YDR532C BCH2P36122 765 aa12.68□□□□□ -0.38
KRE28YDR532C BUD31P25337 157 aaPredicted RBP12.64□□□□□ -0.39
KRE28YDR532C SLX5P32828 619 aaKnown RBP12.63□□□□□ -0.39
KRE28YDR532C TIF4632P39936 914 aaKnown RBP12.6□□□□□ -0.39
KRE28YDR532C TGL3P40308 642 aa12.55□□□□□ -0.4
KRE28YDR532C OXP1P28273 1286 aa12.54□□□□□ -0.4
KRE28YDR532C PTP3P40048 928 aa12.35□□□□□ -0.43
KRE28YDR532C YIL055CP40523 627 aaKnown RBP12.35□□□□□ -0.43
KRE28YDR532C EPS1P40557 701 aa12.35□□□□□ -0.43
KRE28YDR532C BDF1P35817 686 aa12.31□□□□□ -0.44
KRE28YDR532C TFA1P36100 482 aa12.23□□□□□ -0.45
KRE28YDR532C UBP9P39967 754 aa12.22□□□□□ -0.45
KRE28YDR532C RSM7P47150 247 aa12.18□□□□□ -0.46
KRE28YDR532C YAH1Q12184 172 aaKnown RBP12.13□□□□□ -0.47
KRE28YDR532C BBC1P47068 1157 aa12.12□□□□□ -0.47
KRE28YDR532C AI2P03876 854 aa12.08□□□□□ -0.48
KRE28YDR532C SIS1P25294 352 aaKnown RBP12.01□□□□□ -0.49
KRE28YDR532C MST1P07236 462 aa12□□□□□ -0.49
KRE28YDR532C NSR1P27476 414 aaKnown RBP RIP-Chip data11.96□□□□□ -0.49not detected
KRE28YDR532C YOR238WQ08634 303 aa11.95□□□□□ -0.5
KRE28YDR532C YLR271WQ06152 274 aa11.94□□□□□ -0.5
KRE28YDR532C YAP5P40574 245 aa11.85□□□□□ -0.51
KRE28YDR532C YBL029C-AQ3E756 94 aa11.82□□□□□ -0.52
KRE28YDR532C PSD2P53037 1138 aaKnown RBP11.8□□□□□ -0.52
KRE28YDR532C SSP1P38871 571 aa11.74□□□□□ -0.53
KRE28YDR532C VNX1P42839 908 aa11.7□□□□□ -0.54
KRE28YDR532C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.7□□□□□ -0.54not detected
KRE28YDR532C MRM1P25270 412 aa11.63□□□□□ -0.55
KRE28YDR532C WSC3Q12215 556 aa11.61□□□□□ -0.55
KRE28YDR532C SPP1Q03012 353 aa11.59□□□□□ -0.55
KRE28YDR532C GTT3P39996 337 aa11.58□□□□□ -0.56
KRE28YDR532C PIB1Q06651 286 aa11.51□□□□□ -0.57
KRE28YDR532C CST9Q06032 482 aa11.5□□□□□ -0.57
KRE28YDR532C MGA2P40578 1113 aa11.49□□□□□ -0.57
KRE28YDR532C TIF11P38912 153 aaKnown RBP11.48□□□□□ -0.57
KRE28YDR532C YMR1P47147 688 aaKnown RBP RIP-Chip data11.39□□□□□ -0.59not detected
KRE28YDR532C RTG3P38165 486 aa11.38□□□□□ -0.59
KRE28YDR532C VPS29P38759 282 aa11.38□□□□□ -0.59
KRE28YDR532C FKH1P40466 484 aa11.35□□□□□ -0.59
KRE28YDR532C ULI1P43604 169 aa11.34□□□□□ -0.59
KRE28YDR532C AIR2Q12476 344 aaKnown RBP11.34□□□□□ -0.59
KRE28YDR532C DBP1P24784 617 aaKnown RBP11.33□□□□□ -0.6
KRE28YDR532C MSB4Q12317 492 aa11.32□□□□□ -0.6
KRE28YDR532C IOC2Q12072 812 aa11.3□□□□□ -0.6
KRE28YDR532C LDB19Q12502 818 aa11.3□□□□□ -0.6
KRE28YDR532C YFR006WP43590 535 aa11.28□□□□□ -0.6
KRE28YDR532C STS1P38637 319 aa11.27□□□□□ -0.61
KRE28YDR532C EAP1P36041 632 aaKnown RBP11.25□□□□□ -0.61
KRE28YDR532C YOL036WQ08206 761 aa11.25□□□□□ -0.61
KRE28YDR532C RCR1P38212 213 aa11.24□□□□□ -0.61
KRE28YDR532C YJL171CP46992 396 aa11.24□□□□□ -0.61
KRE28YDR532C VMA1P17255 1071 aaKnown RBP11.23□□□□□ -0.61
KRE28YDR532C SET4P42948 560 aa11.23□□□□□ -0.61
KRE28YDR532C SAM3Q08986 587 aa11.18□□□□□ -0.62
KRE28YDR532C TRP5P00931 707 aaKnown RBP11.15□□□□□ -0.62
KRE28YDR532C RTG1P32607 177 aa11.1□□□□□ -0.63
KRE28YDR532C BMT6Q12291 365 aa11.1□□□□□ -0.63
KRE28YDR532C YNL035CP53962 389 aaKnown RBP11.05□□□□□ -0.64
KRE28YDR532C NCR1Q12200 1170 aa11.03□□□□□ -0.64
KRE28YDR532C SEC61P32915 480 aa11.02□□□□□ -0.65
KRE28YDR532C ABP1P15891 592 aaKnown RBP11□□□□□ -0.65
KRE28YDR532C GYP5Q12344 894 aa11□□□□□ -0.65
KRE28YDR532C JIP4Q03361 876 aa10.93□□□□□ -0.66
KRE28YDR532C HTA1P04911 132 aaKnown RBP10.92□□□□□ -0.66
KRE28YDR532C HTA2P04912 132 aa10.92□□□□□ -0.66
KRE28YDR532C DAN4P47179 1161 aa10.91□□□□□ -0.66
KRE28YDR532C DCW1P36091 449 aa10.9□□□□□ -0.66
KRE28YDR532C RAM2P29703 316 aa10.89□□□□□ -0.67
KRE28YDR532C TFG1P41895 735 aaPredicted RBP10.89□□□□□ -0.67
KRE28YDR532C MAK11P20484 414 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms