RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W MTC1P47018 478 aaKnown RBP14.85□□□□□ -0.03
RSM28YDR494W DRS1P32892 752 aaKnown RBP13.94□□□□□ -0.18
RSM28YDR494W FAP1P53971 965 aa13.26□□□□□ -0.29
RSM28YDR494W PRI1P10363 409 aa12.48□□□□□ -0.41
RSM28YDR494W PRY3P47033 881 aa12.46□□□□□ -0.41
RSM28YDR494W AAD16Q02895 342 aa12.39□□□□□ -0.43
RSM28YDR494W ISW2Q08773 1120 aa12.28□□□□□ -0.44
RSM28YDR494W DIP2Q12220 943 aaPredicted RBP12.19□□□□□ -0.46
RSM28YDR494W RPG1P38249 964 aaKnown RBP12.16□□□□□ -0.46
RSM28YDR494W YCK3P39962 524 aa11.8□□□□□ -0.52
RSM28YDR494W TSR3Q12094 313 aaKnown RBP11.79□□□□□ -0.52
RSM28YDR494W AVT3P36062 692 aa11.78□□□□□ -0.52
RSM28YDR494W RSE1Q04693 1361 aaKnown RBP11.77□□□□□ -0.53
RSM28YDR494W HAA1Q12753 694 aaKnown RBP11.71□□□□□ -0.53
RSM28YDR494W BFR2Q06631 534 aaKnown RBP11.61□□□□□ -0.55
RSM28YDR494W RPL17AP05740 184 aaKnown RBP11.39□□□□□ -0.59
RSM28YDR494W RPL17BP46990 184 aaKnown RBP11.39□□□□□ -0.59
RSM28YDR494W REB1P21538 810 aa11.33□□□□□ -0.6
RSM28YDR494W MRPL32P25348 183 aa11.33□□□□□ -0.6
RSM28YDR494W SPT21P35209 758 aa10.91□□□□□ -0.66
RSM28YDR494W YGL015CP33199 130 aa10.86□□□□□ -0.67
RSM28YDR494W CDC27P38042 758 aa10.79□□□□□ -0.68
RSM28YDR494W YKR023WP36119 530 aaKnown RBP10.78□□□□□ -0.68
RSM28YDR494W TFC8Q12308 588 aa10.56□□□□□ -0.72
RSM28YDR494W RIM101P33400 625 aa10.55□□□□□ -0.72
RSM28YDR494W HOP09932 586 aa10.54□□□□□ -0.72
RSM28YDR494W DCD1P06773 312 aa10.49□□□□□ -0.73
RSM28YDR494W UBP10P53874 792 aaPredicted RBP10.48□□□□□ -0.73
RSM28YDR494W MAP2P38174 421 aaKnown RBP10.44□□□□□ -0.74
RSM28YDR494W TFA1P36100 482 aa10.28□□□□□ -0.76
RSM28YDR494W SCY1P53009 804 aa10.24□□□□□ -0.77
RSM28YDR494W OXP1P28273 1286 aa10.21□□□□□ -0.77
RSM28YDR494W BCH2P36122 765 aa10.21□□□□□ -0.77
RSM28YDR494W SLX5P32828 619 aaKnown RBP10.11□□□□□ -0.79
RSM28YDR494W TIF4632P39936 914 aaKnown RBP10.04□□□□□ -0.8
RSM28YDR494W YIL055CP40523 627 aaKnown RBP10.04□□□□□ -0.8
RSM28YDR494W PTP3P40048 928 aa10.01□□□□□ -0.81
RSM28YDR494W TGL3P40308 642 aa9.99□□□□□ -0.81
RSM28YDR494W EPS1P40557 701 aa9.96□□□□□ -0.82
RSM28YDR494W BDF1P35817 686 aa9.92□□□□□ -0.82
RSM28YDR494W BUD31P25337 157 aaPredicted RBP9.91□□□□□ -0.82
RSM28YDR494W RSM7P47150 247 aa9.9□□□□□ -0.82
RSM28YDR494W YAH1Q12184 172 aaKnown RBP9.89□□□□□ -0.83
RSM28YDR494W AI2P03876 854 aa9.8□□□□□ -0.84
RSM28YDR494W BBC1P47068 1157 aa9.8□□□□□ -0.84
RSM28YDR494W YLR271WQ06152 274 aa9.74□□□□□ -0.85
RSM28YDR494W UBP9P39967 754 aa9.66□□□□□ -0.86
RSM28YDR494W SSP1P38871 571 aa9.64□□□□□ -0.87
RSM28YDR494W MST1P07236 462 aa9.6□□□□□ -0.87
RSM28YDR494W NSR1P27476 414 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87 RIP-Chip
RSM28YDR494W PSD2P53037 1138 aaKnown RBP9.59□□□□□ -0.87
RSM28YDR494W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
RSM28YDR494W YOR238WQ08634 303 aa9.56□□□□□ -0.88
RSM28YDR494W YAP5P40574 245 aa9.51□□□□□ -0.89
RSM28YDR494W MRM1P25270 412 aa9.45□□□□□ -0.9
RSM28YDR494W SIS1P25294 352 aaKnown RBP9.44□□□□□ -0.9
RSM28YDR494W YBL029C-AQ3E756 94 aa9.41□□□□□ -0.9
RSM28YDR494W MGA2P40578 1113 aa9.4□□□□□ -0.9
RSM28YDR494W CST9Q06032 482 aa9.4□□□□□ -0.9
RSM28YDR494W VNX1P42839 908 aa9.33□□□□□ -0.92
RSM28YDR494W GTT3P39996 337 aa9.28□□□□□ -0.92
RSM28YDR494W PIB1Q06651 286 aa9.28□□□□□ -0.92
RSM28YDR494W WSC3Q12215 556 aa9.28□□□□□ -0.92
RSM28YDR494W RTG3P38165 486 aa9.25□□□□□ -0.93
RSM28YDR494W VPS29P38759 282 aa9.25□□□□□ -0.93
RSM28YDR494W SPP1Q03012 353 aa9.23□□□□□ -0.93
RSM28YDR494W YMR1P47147 688 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
RSM28YDR494W DBP1P24784 617 aaKnown RBP9.18□□□□□ -0.94
RSM28YDR494W RCR1P38212 213 aa9.17□□□□□ -0.94
RSM28YDR494W TIF11P38912 153 aaKnown RBP9.17□□□□□ -0.94
RSM28YDR494W YFR006WP43590 535 aa9.15□□□□□ -0.94
RSM28YDR494W STS1P38637 319 aa9.14□□□□□ -0.95
RSM28YDR494W MSB4Q12317 492 aa9.08□□□□□ -0.96
RSM28YDR494W VMA1P17255 1071 aaKnown RBP9.07□□□□□ -0.96
RSM28YDR494W ULI1P43604 169 aa9.07□□□□□ -0.96
RSM28YDR494W YOL036WQ08206 761 aa9.06□□□□□ -0.96
RSM28YDR494W IOC2Q12072 812 aa9.05□□□□□ -0.96
RSM28YDR494W SET4P42948 560 aa9.03□□□□□ -0.96
RSM28YDR494W SAM3Q08986 587 aa9.03□□□□□ -0.96
RSM28YDR494W EAP1P36041 632 aaKnown RBP9.02□□□□□ -0.97
RSM28YDR494W FKH1P40466 484 aa9.02□□□□□ -0.97
RSM28YDR494W LDB19Q12502 818 aa9.02□□□□□ -0.97
RSM28YDR494W AIR2Q12476 344 aaKnown RBP9.01□□□□□ -0.97
RSM28YDR494W TRP5P00931 707 aaKnown RBP8.95□□□□□ -0.98
RSM28YDR494W RAM2P29703 316 aa8.94□□□□□ -0.98
RSM28YDR494W YJL171CP46992 396 aa8.91□□□□□ -0.98
RSM28YDR494W MAK11P20484 414 aaKnown RBP8.89□□□□□ -0.99
RSM28YDR494W GYP5Q12344 894 aa8.89□□□□□ -0.99
RSM28YDR494W RTG1P32607 177 aa8.88□□□□□ -0.99
RSM28YDR494W ABP1P15891 592 aaKnown RBP8.87□□□□□ -0.99
RSM28YDR494W YNL035CP53962 389 aaKnown RBP8.86□□□□□ -0.99
RSM28YDR494W SEC61P32915 480 aa8.82□□□□□ -1
RSM28YDR494W NCR1Q12200 1170 aa8.82□□□□□ -1
RSM28YDR494W BMT6Q12291 365 aa8.82□□□□□ -1
RSM28YDR494W HTA1P04911 132 aaKnown RBP8.81□□□□□ -1
RSM28YDR494W HTA2P04912 132 aa8.81□□□□□ -1
RSM28YDR494W MIF2P35201 549 aa8.81□□□□□ -1
RSM28YDR494W DCW1P36091 449 aa8.81□□□□□ -1
RSM28YDR494W EDS1P38073 919 aa8.8□□□□□ -1
RSM28YDR494W JIP4Q03361 876 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms