RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W MTC1P47018 478 aaKnown RBP13.31□□□□□ -0.28
SLD5YDR489W FAP1P53971 965 aa12.83□□□□□ -0.36
SLD5YDR489W PRY3P47033 881 aa12.09□□□□□ -0.47
SLD5YDR489W DRS1P32892 752 aaKnown RBP11.69□□□□□ -0.54
SLD5YDR489W AAD16Q02895 342 aa11.67□□□□□ -0.54
SLD5YDR489W PRI1P10363 409 aa11.64□□□□□ -0.55
SLD5YDR489W YCK3P39962 524 aa11.37□□□□□ -0.59
SLD5YDR489W HAA1Q12753 694 aaKnown RBP11.3□□□□□ -0.6
SLD5YDR489W ISW2Q08773 1120 aa11.2□□□□□ -0.62
SLD5YDR489W RPG1P38249 964 aaKnown RBP11.11□□□□□ -0.63
SLD5YDR489W TSR3Q12094 313 aaKnown RBP10.97□□□□□ -0.65
SLD5YDR489W MRPL32P25348 183 aa10.55□□□□□ -0.72
SLD5YDR489W DIP2Q12220 943 aaPredicted RBP10.52□□□□□ -0.73
SLD5YDR489W RSE1Q04693 1361 aaKnown RBP10.38□□□□□ -0.75
SLD5YDR489W YGL015CP33199 130 aa10.33□□□□□ -0.76
SLD5YDR489W REB1P21538 810 aa10.13□□□□□ -0.79
SLD5YDR489W RPL17AP05740 184 aaKnown RBP10.1□□□□□ -0.79
SLD5YDR489W RPL17BP46990 184 aaKnown RBP10.1□□□□□ -0.79
SLD5YDR489W AVT3P36062 692 aa9.92□□□□□ -0.82
SLD5YDR489W CDC27P38042 758 aa9.88□□□□□ -0.83
SLD5YDR489W BUD31P25337 157 aaPredicted RBP9.78□□□□□ -0.84
SLD5YDR489W UBP10P53874 792 aaPredicted RBP9.69□□□□□ -0.86
SLD5YDR489W YKR023WP36119 530 aaKnown RBP9.67□□□□□ -0.86
SLD5YDR489W MAP2P38174 421 aaKnown RBP9.66□□□□□ -0.86
SLD5YDR489W SPT21P35209 758 aa9.59□□□□□ -0.87
SLD5YDR489W HOP09932 586 aa9.48□□□□□ -0.89
SLD5YDR489W TFC8Q12308 588 aa9.47□□□□□ -0.89
SLD5YDR489W DCD1P06773 312 aa9.46□□□□□ -0.9
SLD5YDR489W BFR2Q06631 534 aaKnown RBP9.35□□□□□ -0.91
SLD5YDR489W SCY1P53009 804 aa9.33□□□□□ -0.92
SLD5YDR489W TIF4632P39936 914 aaKnown RBP9.32□□□□□ -0.92
SLD5YDR489W TGL3P40308 642 aa9.29□□□□□ -0.92
SLD5YDR489W SLX5P32828 619 aaKnown RBP9.26□□□□□ -0.93
SLD5YDR489W SIS1P25294 352 aaKnown RBP9.25□□□□□ -0.93
SLD5YDR489W UBP9P39967 754 aa9.23□□□□□ -0.93
SLD5YDR489W BCH2P36122 765 aa9.14□□□□□ -0.95
SLD5YDR489W RIM101P33400 625 aa9.11□□□□□ -0.95
SLD5YDR489W EPS1P40557 701 aa8.85□□□□□ -0.99
SLD5YDR489W BDF1P35817 686 aa8.84□□□□□ -0.99
SLD5YDR489W MST1P07236 462 aa8.8□□□□□ -1
SLD5YDR489W OXP1P28273 1286 aa8.78□□□□□ -1
SLD5YDR489W YBL029C-AQ3E756 94 aa8.78□□□□□ -1
SLD5YDR489W YOR238WQ08634 303 aa8.74□□□□□ -1.01
SLD5YDR489W PTP3P40048 928 aa8.68□□□□□ -1.02
SLD5YDR489W YIL055CP40523 627 aaKnown RBP8.67□□□□□ -1.02
SLD5YDR489W VNX1P42839 908 aa8.66□□□□□ -1.02
SLD5YDR489W NSR1P27476 414 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
SLD5YDR489W SPP1Q03012 353 aa8.58□□□□□ -1.04
SLD5YDR489W YAP5P40574 245 aa8.57□□□□□ -1.04
SLD5YDR489W BBC1P47068 1157 aa8.57□□□□□ -1.04
SLD5YDR489W WSC3Q12215 556 aa8.54□□□□□ -1.04
SLD5YDR489W RSM7P47150 247 aa8.53□□□□□ -1.04
SLD5YDR489W AI2P03876 854 aa8.51□□□□□ -1.05
SLD5YDR489W AIR2Q12476 344 aaKnown RBP8.46□□□□□ -1.06
SLD5YDR489W TIF11P38912 153 aaKnown RBP8.44□□□□□ -1.06
SLD5YDR489W YJL171CP46992 396 aa8.44□□□□□ -1.06
SLD5YDR489W YAH1Q12184 172 aaKnown RBP8.42□□□□□ -1.06
SLD5YDR489W GTT3P39996 337 aa8.41□□□□□ -1.06
SLD5YDR489W FKH1P40466 484 aa8.41□□□□□ -1.06
SLD5YDR489W TFA1P36100 482 aa8.36□□□□□ -1.07
SLD5YDR489W LDB19Q12502 818 aa8.32□□□□□ -1.08
SLD5YDR489W ULI1P43604 169 aa8.31□□□□□ -1.08
SLD5YDR489W IOC2Q12072 812 aa8.29□□□□□ -1.08
SLD5YDR489W PIB1Q06651 286 aa8.27□□□□□ -1.09
SLD5YDR489W BMT6Q12291 365 aa8.27□□□□□ -1.09
SLD5YDR489W YLR271WQ06152 274 aa8.25□□□□□ -1.09
SLD5YDR489W PSD2P53037 1138 aaKnown RBP8.2□□□□□ -1.1
SLD5YDR489W MRM1P25270 412 aa8.17□□□□□ -1.1
SLD5YDR489W MSB4Q12317 492 aa8.17□□□□□ -1.1
SLD5YDR489W EAP1P36041 632 aaKnown RBP8.16□□□□□ -1.1
SLD5YDR489W RTG1P32607 177 aa8.11□□□□□ -1.11
SLD5YDR489W SET4P42948 560 aa8.09□□□□□ -1.11
SLD5YDR489W YOL036WQ08206 761 aa8.09□□□□□ -1.11
SLD5YDR489W NCR1Q12200 1170 aa8.09□□□□□ -1.11
SLD5YDR489W TRP5P00931 707 aaKnown RBP8.08□□□□□ -1.12
SLD5YDR489W YMR1P47147 688 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
SLD5YDR489W YNL035CP53962 389 aaKnown RBP8.03□□□□□ -1.12
SLD5YDR489W DBP1P24784 617 aaKnown RBP8.02□□□□□ -1.13
SLD5YDR489W SEC61P32915 480 aa8.01□□□□□ -1.13
SLD5YDR489W VPS29P38759 282 aa8□□□□□ -1.13
SLD5YDR489W YFR006WP43590 535 aa7.98□□□□□ -1.13
SLD5YDR489W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
SLD5YDR489W VMA1P17255 1071 aaKnown RBP7.96□□□□□ -1.14
SLD5YDR489W RTG3P38165 486 aa7.95□□□□□ -1.14
SLD5YDR489W SSP1P38871 571 aa7.95□□□□□ -1.14
SLD5YDR489W SAM3Q08986 587 aa7.95□□□□□ -1.14
SLD5YDR489W STS1P38637 319 aa7.93□□□□□ -1.14
SLD5YDR489W TFG1P41895 735 aaPredicted RBP7.93□□□□□ -1.14
SLD5YDR489W CST9Q06032 482 aa7.92□□□□□ -1.14
SLD5YDR489W SAP30P38429 201 aa7.88□□□□□ -1.15
SLD5YDR489W DAN4P47179 1161 aa7.87□□□□□ -1.15
SLD5YDR489W JIP4Q03361 876 aa7.86□□□□□ -1.15
SLD5YDR489W MGA2P40578 1113 aa7.85□□□□□ -1.15
SLD5YDR489W BCK2P33306 851 aa7.84□□□□□ -1.15
SLD5YDR489W CHL1P22516 861 aaPredicted RBP7.82□□□□□ -1.16
SLD5YDR489W YDL129WQ07555 291 aa7.82□□□□□ -1.16
SLD5YDR489W ABP1P15891 592 aaKnown RBP7.81□□□□□ -1.16
SLD5YDR489W GYP5Q12344 894 aa7.81□□□□□ -1.16
SLD5YDR489W RCR1P38212 213 aa7.8□□□□□ -1.16
SLD5YDR489W HTA1P04911 132 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms