RNA–Protein interactions for RNA: YDR397C

NCB2, Transcript of Subunit of a heterodimeric NC2 transcription regulator complex, yeastyeast

Gene NCB2, Length 441 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NCB2YDR397C MTC1P47018 478 aaKnown RBP11.89□□□□□ -0.51
NCB2YDR397C DRS1P32892 752 aaKnown RBP11.24□□□□□ -0.61
NCB2YDR397C FAP1P53971 965 aa10.53□□□□□ -0.72
NCB2YDR397C PRI1P10363 409 aa9.93□□□□□ -0.82
NCB2YDR397C PRY3P47033 881 aa9.87□□□□□ -0.83
NCB2YDR397C ISW2Q08773 1120 aa9.87□□□□□ -0.83
NCB2YDR397C AAD16Q02895 342 aa9.86□□□□□ -0.83
NCB2YDR397C DIP2Q12220 943 aaPredicted RBP9.8□□□□□ -0.84
NCB2YDR397C RPG1P38249 964 aaKnown RBP9.69□□□□□ -0.86
NCB2YDR397C AVT3P36062 692 aa9.47□□□□□ -0.89
NCB2YDR397C RSE1Q04693 1361 aaKnown RBP9.47□□□□□ -0.89
NCB2YDR397C BFR2Q06631 534 aaKnown RBP9.44□□□□□ -0.9
NCB2YDR397C TSR3Q12094 313 aaKnown RBP9.35□□□□□ -0.91
NCB2YDR397C HAA1Q12753 694 aaKnown RBP9.33□□□□□ -0.92
NCB2YDR397C YCK3P39962 524 aa9.22□□□□□ -0.93
NCB2YDR397C RPL17AP05740 184 aaKnown RBP9.12□□□□□ -0.95
NCB2YDR397C REB1P21538 810 aa9.12□□□□□ -0.95
NCB2YDR397C RPL17BP46990 184 aaKnown RBP9.12□□□□□ -0.95
NCB2YDR397C MRPL32P25348 183 aa9.07□□□□□ -0.96
NCB2YDR397C SPT21P35209 758 aa8.72□□□□□ -1.01
NCB2YDR397C TFA1P36100 482 aa8.7□□□□□ -1.02
NCB2YDR397C YGL015CP33199 130 aa8.66□□□□□ -1.02
NCB2YDR397C YKR023WP36119 530 aaKnown RBP8.57□□□□□ -1.04
NCB2YDR397C CDC27P38042 758 aa8.55□□□□□ -1.04
NCB2YDR397C RIM101P33400 625 aa8.47□□□□□ -1.05
NCB2YDR397C TFC8Q12308 588 aa8.43□□□□□ -1.06
NCB2YDR397C UBP10P53874 792 aaPredicted RBP8.4□□□□□ -1.06
NCB2YDR397C HOP09932 586 aa8.39□□□□□ -1.07
NCB2YDR397C DCD1P06773 312 aa8.32□□□□□ -1.08
NCB2YDR397C MAP2P38174 421 aaKnown RBP8.29□□□□□ -1.08
NCB2YDR397C SCY1P53009 804 aa8.17□□□□□ -1.1
NCB2YDR397C BCH2P36122 765 aa8.14□□□□□ -1.11
NCB2YDR397C OXP1P28273 1286 aa8.13□□□□□ -1.11
NCB2YDR397C YIL055CP40523 627 aaKnown RBP8.12□□□□□ -1.11
NCB2YDR397C SLX5P32828 619 aaKnown RBP8.1□□□□□ -1.11
NCB2YDR397C PTP3P40048 928 aa8.09□□□□□ -1.11
NCB2YDR397C TIF4632P39936 914 aaKnown RBP8.08□□□□□ -1.12
NCB2YDR397C TGL3P40308 642 aa8.01□□□□□ -1.13
NCB2YDR397C EPS1P40557 701 aa7.97□□□□□ -1.13
NCB2YDR397C RSM7P47150 247 aa7.96□□□□□ -1.14
NCB2YDR397C YAH1Q12184 172 aaKnown RBP7.95□□□□□ -1.14
NCB2YDR397C BBC1P47068 1157 aa7.93□□□□□ -1.14
NCB2YDR397C BDF1P35817 686 aa7.92□□□□□ -1.14
NCB2YDR397C AI2P03876 854 aa7.87□□□□□ -1.15
NCB2YDR397C BUD31P25337 157 aaPredicted RBP7.85□□□□□ -1.15
NCB2YDR397C YLR271WQ06152 274 aa7.81□□□□□ -1.16
NCB2YDR397C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
NCB2YDR397C SSP1P38871 571 aa7.8□□□□□ -1.16
NCB2YDR397C UBP9P39967 754 aa7.77□□□□□ -1.17
NCB2YDR397C NSR1P27476 414 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
NCB2YDR397C PSD2P53037 1138 aaKnown RBP7.71□□□□□ -1.18
NCB2YDR397C YOR238WQ08634 303 aa7.68□□□□□ -1.18
NCB2YDR397C MST1P07236 462 aa7.66□□□□□ -1.18
NCB2YDR397C YAP5P40574 245 aa7.66□□□□□ -1.18
NCB2YDR397C MGA2P40578 1113 aa7.61□□□□□ -1.19
NCB2YDR397C MRM1P25270 412 aa7.58□□□□□ -1.2
NCB2YDR397C CST9Q06032 482 aa7.53□□□□□ -1.2
NCB2YDR397C SIS1P25294 352 aaKnown RBP7.51□□□□□ -1.21
NCB2YDR397C GTT3P39996 337 aa7.5□□□□□ -1.21
NCB2YDR397C YBL029C-AQ3E756 94 aa7.49□□□□□ -1.21
NCB2YDR397C RTG3P38165 486 aa7.47□□□□□ -1.21
NCB2YDR397C VNX1P42839 908 aa7.44□□□□□ -1.22
NCB2YDR397C YMR1P47147 688 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
NCB2YDR397C SPP1Q03012 353 aa7.41□□□□□ -1.22
NCB2YDR397C WSC3Q12215 556 aa7.41□□□□□ -1.22
NCB2YDR397C VPS29P38759 282 aa7.39□□□□□ -1.23
NCB2YDR397C PIB1Q06651 286 aa7.39□□□□□ -1.23
NCB2YDR397C DBP1P24784 617 aaKnown RBP7.37□□□□□ -1.23
NCB2YDR397C TIF11P38912 153 aaKnown RBP7.35□□□□□ -1.23
NCB2YDR397C MSB4Q12317 492 aa7.34□□□□□ -1.23
NCB2YDR397C RCR1P38212 213 aa7.31□□□□□ -1.24
NCB2YDR397C STS1P38637 319 aa7.31□□□□□ -1.24
NCB2YDR397C YFR006WP43590 535 aa7.31□□□□□ -1.24
NCB2YDR397C EAP1P36041 632 aaKnown RBP7.3□□□□□ -1.24
NCB2YDR397C VMA1P17255 1071 aaKnown RBP7.29□□□□□ -1.24
NCB2YDR397C YOL036WQ08206 761 aa7.27□□□□□ -1.25
NCB2YDR397C ULI1P43604 169 aa7.26□□□□□ -1.25
NCB2YDR397C SAM3Q08986 587 aa7.26□□□□□ -1.25
NCB2YDR397C SET4P42948 560 aa7.23□□□□□ -1.25
NCB2YDR397C ABP1P15891 592 aaKnown RBP7.22□□□□□ -1.25
NCB2YDR397C FKH1P40466 484 aa7.22□□□□□ -1.25
NCB2YDR397C LDB19Q12502 818 aa7.22□□□□□ -1.25
NCB2YDR397C IOC2Q12072 812 aa7.21□□□□□ -1.26
NCB2YDR397C MAK11P20484 414 aaKnown RBP7.2□□□□□ -1.26
NCB2YDR397C RAM2P29703 316 aa7.18□□□□□ -1.26
NCB2YDR397C TRP5P00931 707 aaKnown RBP7.17□□□□□ -1.26
NCB2YDR397C YJL171CP46992 396 aa7.17□□□□□ -1.26
NCB2YDR397C AIR2Q12476 344 aaKnown RBP7.17□□□□□ -1.26
NCB2YDR397C GYP5Q12344 894 aa7.16□□□□□ -1.26
NCB2YDR397C HTA1P04911 132 aaKnown RBP7.12□□□□□ -1.27
NCB2YDR397C HTA2P04912 132 aa7.12□□□□□ -1.27
NCB2YDR397C RTG1P32607 177 aa7.12□□□□□ -1.27
NCB2YDR397C MIF2P35201 549 aa7.12□□□□□ -1.27
NCB2YDR397C YNL035CP53962 389 aaKnown RBP7.12□□□□□ -1.27
NCB2YDR397C SEC61P32915 480 aa7.11□□□□□ -1.27
NCB2YDR397C RQC2Q12532 1038 aaKnown RBP7.11□□□□□ -1.27
NCB2YDR397C JIP4Q03361 876 aa7.1□□□□□ -1.27
NCB2YDR397C GRE2Q12068 342 aaKnown RBP7.1□□□□□ -1.27
NCB2YDR397C NCR1Q12200 1170 aa7.08□□□□□ -1.28
NCB2YDR397C BMT6Q12291 365 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms