RNA–Protein interactions for RNA: YDR363W-A

SEM1, Transcript of Component of lid subcomplex of 26S proteasome regulatory subunit, yeastyeast

Gene SEM1, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEM1YDR363W-A MTC1P47018 478 aaKnown RBP22.88■■□□□ 1.25
SEM1YDR363W-A DRS1P32892 752 aaKnown RBP21.34■■□□□ 1.01
SEM1YDR363W-A FAP1P53971 965 aa20.66■□□□□ 0.9
SEM1YDR363W-A PRY3P47033 881 aa19.41■□□□□ 0.7
SEM1YDR363W-A PRI1P10363 409 aa19.33■□□□□ 0.68
SEM1YDR363W-A AAD16Q02895 342 aa19.22■□□□□ 0.67
SEM1YDR363W-A ISW2Q08773 1120 aa18.98■□□□□ 0.63
SEM1YDR363W-A RPG1P38249 964 aaKnown RBP18.79■□□□□ 0.6
SEM1YDR363W-A DIP2Q12220 943 aaPredicted RBP18.73■□□□□ 0.59
SEM1YDR363W-A YCK3P39962 524 aa18.33■□□□□ 0.52
SEM1YDR363W-A TSR3Q12094 313 aaKnown RBP18.27■□□□□ 0.52
SEM1YDR363W-A HAA1Q12753 694 aaKnown RBP18.21■□□□□ 0.51
SEM1YDR363W-A RSE1Q04693 1361 aaKnown RBP18.12■□□□□ 0.49
SEM1YDR363W-A AVT3P36062 692 aa18.03■□□□□ 0.48
SEM1YDR363W-A BFR2Q06631 534 aaKnown RBP17.71■□□□□ 0.43
SEM1YDR363W-A MRPL32P25348 183 aa17.55■□□□□ 0.4
SEM1YDR363W-A RPL17AP05740 184 aaKnown RBP17.54■□□□□ 0.4
SEM1YDR363W-A RPL17BP46990 184 aaKnown RBP17.54■□□□□ 0.4
SEM1YDR363W-A REB1P21538 810 aa17.47■□□□□ 0.39
SEM1YDR363W-A YGL015CP33199 130 aa16.84■□□□□ 0.29
SEM1YDR363W-A SPT21P35209 758 aa16.78■□□□□ 0.28
SEM1YDR363W-A CDC27P38042 758 aa16.67■□□□□ 0.26
SEM1YDR363W-A YKR023WP36119 530 aaKnown RBP16.62■□□□□ 0.25
SEM1YDR363W-A HOP09932 586 aa16.28■□□□□ 0.2
SEM1YDR363W-A TFC8Q12308 588 aa16.28■□□□□ 0.2
SEM1YDR363W-A DCD1P06773 312 aa16.21■□□□□ 0.19
SEM1YDR363W-A RIM101P33400 625 aa16.19■□□□□ 0.18
SEM1YDR363W-A UBP10P53874 792 aaPredicted RBP16.18■□□□□ 0.18
SEM1YDR363W-A MAP2P38174 421 aaKnown RBP16.15■□□□□ 0.18
SEM1YDR363W-A TFA1P36100 482 aa15.85■□□□□ 0.13
SEM1YDR363W-A SCY1P53009 804 aa15.82■□□□□ 0.12
SEM1YDR363W-A BCH2P36122 765 aa15.75■□□□□ 0.11
SEM1YDR363W-A OXP1P28273 1286 aa15.65■□□□□ 0.1
SEM1YDR363W-A SLX5P32828 619 aaKnown RBP15.61■□□□□ 0.09
SEM1YDR363W-A TIF4632P39936 914 aaKnown RBP15.53■□□□□ 0.08
SEM1YDR363W-A TGL3P40308 642 aa15.46■□□□□ 0.07
SEM1YDR363W-A BUD31P25337 157 aaPredicted RBP15.44■□□□□ 0.06
SEM1YDR363W-A YIL055CP40523 627 aaKnown RBP15.43■□□□□ 0.06
SEM1YDR363W-A PTP3P40048 928 aa15.42■□□□□ 0.06
SEM1YDR363W-A EPS1P40557 701 aa15.35■□□□□ 0.05
SEM1YDR363W-A BDF1P35817 686 aa15.29■□□□□ 0.04
SEM1YDR363W-A RSM7P47150 247 aa15.2■□□□□ 0.02
SEM1YDR363W-A YAH1Q12184 172 aaKnown RBP15.19■□□□□ 0.02
SEM1YDR363W-A BBC1P47068 1157 aa15.07■□□□□ 0
SEM1YDR363W-A AI2P03876 854 aa15.06■□□□□ 0
SEM1YDR363W-A UBP9P39967 754 aa15□□□□□ -0.01
SEM1YDR363W-A YLR271WQ06152 274 aa14.94□□□□□ -0.02
SEM1YDR363W-A MST1P07236 462 aa14.81□□□□□ -0.04
SEM1YDR363W-A YOR238WQ08634 303 aa14.78□□□□□ -0.04
SEM1YDR363W-A NSR1P27476 414 aaKnown RBP RIP-Chip data14.76□□□□□ -0.05not detected
SEM1YDR363W-A SSP1P38871 571 aa14.73□□□□□ -0.05
SEM1YDR363W-A SIS1P25294 352 aaKnown RBP14.72□□□□□ -0.05
SEM1YDR363W-A PSD2P53037 1138 aaKnown RBP14.72□□□□□ -0.05
SEM1YDR363W-A YAP5P40574 245 aa14.67□□□□□ -0.06
SEM1YDR363W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data14.65□□□□□ -0.06not detected
SEM1YDR363W-A YBL029C-AQ3E756 94 aa14.58□□□□□ -0.08
SEM1YDR363W-A MRM1P25270 412 aa14.52□□□□□ -0.09
SEM1YDR363W-A VNX1P42839 908 aa14.43□□□□□ -0.1
SEM1YDR363W-A CST9Q06032 482 aa14.4□□□□□ -0.1
SEM1YDR363W-A MGA2P40578 1113 aa14.38□□□□□ -0.11
SEM1YDR363W-A WSC3Q12215 556 aa14.37□□□□□ -0.11
SEM1YDR363W-A GTT3P39996 337 aa14.33□□□□□ -0.12
SEM1YDR363W-A PIB1Q06651 286 aa14.33□□□□□ -0.12
SEM1YDR363W-A SPP1Q03012 353 aa14.31□□□□□ -0.12
SEM1YDR363W-A RTG3P38165 486 aa14.2□□□□□ -0.14
SEM1YDR363W-A VPS29P38759 282 aa14.19□□□□□ -0.14
SEM1YDR363W-A TIF11P38912 153 aaKnown RBP14.17□□□□□ -0.14
SEM1YDR363W-A YMR1P47147 688 aaKnown RBP RIP-Chip data14.17□□□□□ -0.14not detected
SEM1YDR363W-A DBP1P24784 617 aaKnown RBP14.12□□□□□ -0.15
SEM1YDR363W-A RCR1P38212 213 aa14.07□□□□□ -0.16
SEM1YDR363W-A YFR006WP43590 535 aa14.07□□□□□ -0.16
SEM1YDR363W-A STS1P38637 319 aa14.05□□□□□ -0.16
SEM1YDR363W-A ULI1P43604 169 aa14.02□□□□□ -0.17
SEM1YDR363W-A MSB4Q12317 492 aa13.99□□□□□ -0.17
SEM1YDR363W-A IOC2Q12072 812 aa13.97□□□□□ -0.17
SEM1YDR363W-A VMA1P17255 1071 aaKnown RBP13.96□□□□□ -0.17
SEM1YDR363W-A FKH1P40466 484 aa13.96□□□□□ -0.17
SEM1YDR363W-A AIR2Q12476 344 aaKnown RBP13.96□□□□□ -0.17
SEM1YDR363W-A YOL036WQ08206 761 aa13.95□□□□□ -0.18
SEM1YDR363W-A LDB19Q12502 818 aa13.95□□□□□ -0.18
SEM1YDR363W-A SET4P42948 560 aa13.93□□□□□ -0.18
SEM1YDR363W-A EAP1P36041 632 aaKnown RBP13.9□□□□□ -0.18
SEM1YDR363W-A SAM3Q08986 587 aa13.86□□□□□ -0.19
SEM1YDR363W-A YJL171CP46992 396 aa13.83□□□□□ -0.2
SEM1YDR363W-A TRP5P00931 707 aaKnown RBP13.81□□□□□ -0.2
SEM1YDR363W-A RTG1P32607 177 aa13.73□□□□□ -0.21
SEM1YDR363W-A GYP5Q12344 894 aa13.68□□□□□ -0.22
SEM1YDR363W-A YNL035CP53962 389 aaKnown RBP13.67□□□□□ -0.22
SEM1YDR363W-A BMT6Q12291 365 aa13.67□□□□□ -0.22
SEM1YDR363W-A RAM2P29703 316 aa13.65□□□□□ -0.22
SEM1YDR363W-A NCR1Q12200 1170 aa13.64□□□□□ -0.23
SEM1YDR363W-A ABP1P15891 592 aaKnown RBP13.62□□□□□ -0.23
SEM1YDR363W-A SEC61P32915 480 aa13.61□□□□□ -0.23
SEM1YDR363W-A MAK11P20484 414 aaKnown RBP13.6□□□□□ -0.23
SEM1YDR363W-A DCW1P36091 449 aa13.57□□□□□ -0.24
SEM1YDR363W-A HTA1P04911 132 aaKnown RBP13.55□□□□□ -0.24
SEM1YDR363W-A HTA2P04912 132 aa13.55□□□□□ -0.24
SEM1YDR363W-A MIF2P35201 549 aa13.54□□□□□ -0.24
SEM1YDR363W-A JIP4Q03361 876 aa13.53□□□□□ -0.24
SEM1YDR363W-A DAN4P47179 1161 aa13.52□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms