RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C MTC1P47018 478 aaKnown RBP15.46■□□□□ 0.07
FCF1YDR339C DRS1P32892 752 aaKnown RBP14.27□□□□□ -0.13
FCF1YDR339C FAP1P53971 965 aa14.22□□□□□ -0.13
FCF1YDR339C PRY3P47033 881 aa13.38□□□□□ -0.27
FCF1YDR339C PRI1P10363 409 aa13.16□□□□□ -0.3
FCF1YDR339C AAD16Q02895 342 aa13.11□□□□□ -0.31
FCF1YDR339C ISW2Q08773 1120 aa12.84□□□□□ -0.35
FCF1YDR339C RPG1P38249 964 aaKnown RBP12.78□□□□□ -0.36
FCF1YDR339C YCK3P39962 524 aa12.65□□□□□ -0.38
FCF1YDR339C DIP2Q12220 943 aaPredicted RBP12.59□□□□□ -0.39
FCF1YDR339C TSR3Q12094 313 aaKnown RBP12.5□□□□□ -0.41
FCF1YDR339C HAA1Q12753 694 aaKnown RBP12.45□□□□□ -0.42
FCF1YDR339C RSE1Q04693 1361 aaKnown RBP12.18□□□□□ -0.46
FCF1YDR339C AVT3P36062 692 aa12.04□□□□□ -0.48
FCF1YDR339C MRPL32P25348 183 aa11.94□□□□□ -0.5
FCF1YDR339C RPL17AP05740 184 aaKnown RBP11.86□□□□□ -0.51
FCF1YDR339C RPL17BP46990 184 aaKnown RBP11.86□□□□□ -0.51
FCF1YDR339C REB1P21538 810 aa11.8□□□□□ -0.52
FCF1YDR339C BFR2Q06631 534 aaKnown RBP11.74□□□□□ -0.53
FCF1YDR339C YGL015CP33199 130 aa11.48□□□□□ -0.57
FCF1YDR339C CDC27P38042 758 aa11.36□□□□□ -0.59
FCF1YDR339C SPT21P35209 758 aa11.29□□□□□ -0.6
FCF1YDR339C YKR023WP36119 530 aaKnown RBP11.26□□□□□ -0.61
FCF1YDR339C HOP09932 586 aa11.07□□□□□ -0.64
FCF1YDR339C DCD1P06773 312 aa11.06□□□□□ -0.64
FCF1YDR339C MAP2P38174 421 aaKnown RBP11.02□□□□□ -0.65
FCF1YDR339C TFC8Q12308 588 aa11□□□□□ -0.65
FCF1YDR339C UBP10P53874 792 aaPredicted RBP10.94□□□□□ -0.66
FCF1YDR339C RIM101P33400 625 aa10.85□□□□□ -0.67
FCF1YDR339C SCY1P53009 804 aa10.76□□□□□ -0.69
FCF1YDR339C BCH2P36122 765 aa10.67□□□□□ -0.7
FCF1YDR339C BUD31P25337 157 aaPredicted RBP10.61□□□□□ -0.71
FCF1YDR339C SLX5P32828 619 aaKnown RBP10.58□□□□□ -0.72
FCF1YDR339C OXP1P28273 1286 aa10.54□□□□□ -0.72
FCF1YDR339C TIF4632P39936 914 aaKnown RBP10.51□□□□□ -0.73
FCF1YDR339C TGL3P40308 642 aa10.47□□□□□ -0.73
FCF1YDR339C PTP3P40048 928 aa10.36□□□□□ -0.75
FCF1YDR339C EPS1P40557 701 aa10.36□□□□□ -0.75
FCF1YDR339C YIL055CP40523 627 aaKnown RBP10.35□□□□□ -0.75
FCF1YDR339C BDF1P35817 686 aa10.34□□□□□ -0.75
FCF1YDR339C YAH1Q12184 172 aaKnown RBP10.23□□□□□ -0.77
FCF1YDR339C UBP9P39967 754 aa10.2□□□□□ -0.78
FCF1YDR339C RSM7P47150 247 aa10.19□□□□□ -0.78
FCF1YDR339C AI2P03876 854 aa10.12□□□□□ -0.79
FCF1YDR339C SIS1P25294 352 aaKnown RBP10.12□□□□□ -0.79
FCF1YDR339C TFA1P36100 482 aa10.12□□□□□ -0.79
FCF1YDR339C BBC1P47068 1157 aa10.1□□□□□ -0.79
FCF1YDR339C YLR271WQ06152 274 aa10.01□□□□□ -0.81
FCF1YDR339C MST1P07236 462 aa10□□□□□ -0.81
FCF1YDR339C YOR238WQ08634 303 aa9.99□□□□□ -0.81
FCF1YDR339C YBL029C-AQ3E756 94 aa9.95□□□□□ -0.82
FCF1YDR339C NSR1P27476 414 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83not detected
FCF1YDR339C YAP5P40574 245 aa9.88□□□□□ -0.83
FCF1YDR339C PSD2P53037 1138 aaKnown RBP9.85□□□□□ -0.83
FCF1YDR339C VNX1P42839 908 aa9.81□□□□□ -0.84
FCF1YDR339C WSC3Q12215 556 aa9.8□□□□□ -0.84
FCF1YDR339C SSP1P38871 571 aa9.79□□□□□ -0.84
FCF1YDR339C MRM1P25270 412 aa9.77□□□□□ -0.85
FCF1YDR339C PIB1Q06651 286 aa9.75□□□□□ -0.85
FCF1YDR339C SPP1Q03012 353 aa9.72□□□□□ -0.85
FCF1YDR339C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
FCF1YDR339C GTT3P39996 337 aa9.68□□□□□ -0.86
FCF1YDR339C CST9Q06032 482 aa9.66□□□□□ -0.86
FCF1YDR339C TIF11P38912 153 aaKnown RBP9.59□□□□□ -0.87
FCF1YDR339C MGA2P40578 1113 aa9.56□□□□□ -0.88
FCF1YDR339C VPS29P38759 282 aa9.54□□□□□ -0.88
FCF1YDR339C YFR006WP43590 535 aa9.52□□□□□ -0.89
FCF1YDR339C DBP1P24784 617 aaKnown RBP9.5□□□□□ -0.89
FCF1YDR339C RTG3P38165 486 aa9.5□□□□□ -0.89
FCF1YDR339C ULI1P43604 169 aa9.5□□□□□ -0.89
FCF1YDR339C AIR2Q12476 344 aaKnown RBP9.5□□□□□ -0.89
FCF1YDR339C YMR1P47147 688 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
FCF1YDR339C RCR1P38212 213 aa9.47□□□□□ -0.89
FCF1YDR339C FKH1P40466 484 aa9.47□□□□□ -0.89
FCF1YDR339C LDB19Q12502 818 aa9.47□□□□□ -0.89
FCF1YDR339C IOC2Q12072 812 aa9.46□□□□□ -0.9
FCF1YDR339C STS1P38637 319 aa9.45□□□□□ -0.9
FCF1YDR339C SET4P42948 560 aa9.43□□□□□ -0.9
FCF1YDR339C YJL171CP46992 396 aa9.41□□□□□ -0.9
FCF1YDR339C YOL036WQ08206 761 aa9.41□□□□□ -0.9
FCF1YDR339C MSB4Q12317 492 aa9.38□□□□□ -0.91
FCF1YDR339C VMA1P17255 1071 aaKnown RBP9.37□□□□□ -0.91
FCF1YDR339C TRP5P00931 707 aaKnown RBP9.34□□□□□ -0.91
FCF1YDR339C EAP1P36041 632 aaKnown RBP9.33□□□□□ -0.92
FCF1YDR339C RTG1P32607 177 aa9.29□□□□□ -0.92
FCF1YDR339C SAM3Q08986 587 aa9.29□□□□□ -0.92
FCF1YDR339C BMT6Q12291 365 aa9.27□□□□□ -0.93
FCF1YDR339C NCR1Q12200 1170 aa9.24□□□□□ -0.93
FCF1YDR339C YNL035CP53962 389 aaKnown RBP9.21□□□□□ -0.94
FCF1YDR339C GYP5Q12344 894 aa9.19□□□□□ -0.94
FCF1YDR339C DCW1P36091 449 aa9.16□□□□□ -0.94
FCF1YDR339C SEC61P32915 480 aa9.15□□□□□ -0.94
FCF1YDR339C DAN4P47179 1161 aa9.11□□□□□ -0.95
FCF1YDR339C RAM2P29703 316 aa9.1□□□□□ -0.95
FCF1YDR339C HTA1P04911 132 aaKnown RBP9.09□□□□□ -0.95
FCF1YDR339C HTA2P04912 132 aa9.09□□□□□ -0.95
FCF1YDR339C MIF2P35201 549 aa9.07□□□□□ -0.96
FCF1YDR339C TFG1P41895 735 aaPredicted RBP9.07□□□□□ -0.96
FCF1YDR339C JIP4Q03361 876 aa9.07□□□□□ -0.96
FCF1YDR339C ABP1P15891 592 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms