RNA–Protein interactions for RNA: YDR322C-A

TIM11, Transcript of Subunit e of mitochondrial F1F0-ATPase, yeastyeast

Gene TIM11, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM11YDR322C-A MTC1P47018 478 aaKnown RBP7.45□□□□□ -1.22
TIM11YDR322C-A FAP1P53971 965 aa7.03□□□□□ -1.28
TIM11YDR322C-A DRS1P32892 752 aaKnown RBP6.7□□□□□ -1.34
TIM11YDR322C-A PRY3P47033 881 aa6.64□□□□□ -1.35
TIM11YDR322C-A PRI1P10363 409 aa6.48□□□□□ -1.37
TIM11YDR322C-A AAD16Q02895 342 aa6.46□□□□□ -1.38
TIM11YDR322C-A YCK3P39962 524 aa6.31□□□□□ -1.4
TIM11YDR322C-A HAA1Q12753 694 aaKnown RBP6.25□□□□□ -1.41
TIM11YDR322C-A ISW2Q08773 1120 aa6.24□□□□□ -1.41
TIM11YDR322C-A RPG1P38249 964 aaKnown RBP6.17□□□□□ -1.42
TIM11YDR322C-A TSR3Q12094 313 aaKnown RBP6.06□□□□□ -1.44
TIM11YDR322C-A BFR2Q06631 534 aaKnown RBP5.97□□□□□ -1.45
TIM11YDR322C-A TFA1P36100 482 aa5.89□□□□□ -1.47
TIM11YDR322C-A DIP2Q12220 943 aaPredicted RBP5.87□□□□□ -1.47
TIM11YDR322C-A MRPL32P25348 183 aa5.84□□□□□ -1.47
TIM11YDR322C-A RSE1Q04693 1361 aaKnown RBP5.8□□□□□ -1.48
TIM11YDR322C-A YGL015CP33199 130 aa5.71□□□□□ -1.5
TIM11YDR322C-A RPL17AP05740 184 aaKnown RBP5.63□□□□□ -1.51
TIM11YDR322C-A REB1P21538 810 aa5.63□□□□□ -1.51
TIM11YDR322C-A RPL17BP46990 184 aaKnown RBP5.63□□□□□ -1.51
TIM11YDR322C-A AVT3P36062 692 aa5.61□□□□□ -1.51
TIM11YDR322C-A RQC2Q12532 1038 aaKnown RBP5.56□□□□□ -1.52
TIM11YDR322C-A CDC27P38042 758 aa5.5□□□□□ -1.53
TIM11YDR322C-A BUD31P25337 157 aaPredicted RBP5.44□□□□□ -1.54
TIM11YDR322C-A UBP10P53874 792 aaPredicted RBP5.44□□□□□ -1.54
TIM11YDR322C-A SPT21P35209 758 aa5.41□□□□□ -1.54
TIM11YDR322C-A YKR023WP36119 530 aaKnown RBP5.4□□□□□ -1.54
TIM11YDR322C-A MAP2P38174 421 aaKnown RBP5.36□□□□□ -1.55
TIM11YDR322C-A TFC8Q12308 588 aa5.29□□□□□ -1.56
TIM11YDR322C-A HOP09932 586 aa5.25□□□□□ -1.57
TIM11YDR322C-A DCD1P06773 312 aa5.23□□□□□ -1.57
TIM11YDR322C-A TIF4632P39936 914 aaKnown RBP5.18□□□□□ -1.58
TIM11YDR322C-A SCY1P53009 804 aa5.18□□□□□ -1.58
TIM11YDR322C-A TGL3P40308 642 aa5.17□□□□□ -1.58
TIM11YDR322C-A SLX5P32828 619 aaKnown RBP5.16□□□□□ -1.58
TIM11YDR322C-A RIM101P33400 625 aa5.12□□□□□ -1.59
TIM11YDR322C-A UBP9P39967 754 aa5.11□□□□□ -1.59
TIM11YDR322C-A BCH2P36122 765 aa5.09□□□□□ -1.59
TIM11YDR322C-A TAF7Q05021 590 aa5.09□□□□□ -1.59
TIM11YDR322C-A SIS1P25294 352 aaKnown RBP5.08□□□□□ -1.6
TIM11YDR322C-A DMA1P38823 416 aa4.95□□□□□ -1.62
TIM11YDR322C-A EPS1P40557 701 aa4.95□□□□□ -1.62
TIM11YDR322C-A MST1P07236 462 aa4.94□□□□□ -1.62
TIM11YDR322C-A BDF1P35817 686 aa4.93□□□□□ -1.62
TIM11YDR322C-A OXP1P28273 1286 aa4.92□□□□□ -1.62
TIM11YDR322C-A NSR1P27476 414 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62 RIP-Chip
TIM11YDR322C-A YOR238WQ08634 303 aa4.87□□□□□ -1.63
TIM11YDR322C-A YBL029C-AQ3E756 94 aa4.87□□□□□ -1.63
TIM11YDR322C-A PTP3P40048 928 aa4.85□□□□□ -1.63
TIM11YDR322C-A VNX1P42839 908 aa4.82□□□□□ -1.64
TIM11YDR322C-A YIL055CP40523 627 aaKnown RBP4.81□□□□□ -1.64
TIM11YDR322C-A LEO1P38439 464 aa4.8□□□□□ -1.64
TIM11YDR322C-A YAP5P40574 245 aa4.8□□□□□ -1.64
TIM11YDR322C-A BBC1P47068 1157 aa4.79□□□□□ -1.64
TIM11YDR322C-A SSP1P38871 571 aa4.78□□□□□ -1.64
TIM11YDR322C-A RSM7P47150 247 aa4.78□□□□□ -1.64
TIM11YDR322C-A AI2P03876 854 aa4.76□□□□□ -1.65
TIM11YDR322C-A SPP1Q03012 353 aa4.75□□□□□ -1.65
TIM11YDR322C-A FKH1P40466 484 aa4.73□□□□□ -1.65
TIM11YDR322C-A AIR2Q12476 344 aaKnown RBP4.73□□□□□ -1.65
TIM11YDR322C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
TIM11YDR322C-A TIF11P38912 153 aaKnown RBP4.71□□□□□ -1.66
TIM11YDR322C-A WSC3Q12215 556 aa4.71□□□□□ -1.66
TIM11YDR322C-A GTT3P39996 337 aa4.68□□□□□ -1.66
TIM11YDR322C-A YAH1Q12184 172 aaKnown RBP4.68□□□□□ -1.66
TIM11YDR322C-A YJL171CP46992 396 aa4.65□□□□□ -1.67
TIM11YDR322C-A LEU3P08638 886 aa4.64□□□□□ -1.67
TIM11YDR322C-A LDB19Q12502 818 aa4.64□□□□□ -1.67
TIM11YDR322C-A PSD2P53037 1138 aaKnown RBP4.63□□□□□ -1.67
TIM11YDR322C-A YLR271WQ06152 274 aa4.63□□□□□ -1.67
TIM11YDR322C-A IOC2Q12072 812 aa4.63□□□□□ -1.67
TIM11YDR322C-A SAS10Q12136 610 aaPredicted RBP4.63□□□□□ -1.67
TIM11YDR322C-A ULI1P43604 169 aa4.62□□□□□ -1.67
TIM11YDR322C-A MSB4Q12317 492 aa4.62□□□□□ -1.67
TIM11YDR322C-A BMT6Q12291 365 aa4.6□□□□□ -1.67
TIM11YDR322C-A MGA2P40578 1113 aa4.59□□□□□ -1.67
TIM11YDR322C-A EAP1P36041 632 aaKnown RBP4.57□□□□□ -1.68
TIM11YDR322C-A MRM1P25270 412 aa4.56□□□□□ -1.68
TIM11YDR322C-A PIB1Q06651 286 aa4.56□□□□□ -1.68
TIM11YDR322C-A YOL036WQ08206 761 aa4.54□□□□□ -1.68
TIM11YDR322C-A TRP5P00931 707 aaKnown RBP4.51□□□□□ -1.69
TIM11YDR322C-A RTG1P32607 177 aa4.51□□□□□ -1.69
TIM11YDR322C-A YMR1P47147 688 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
TIM11YDR322C-A SEC61P32915 480 aa4.5□□□□□ -1.69
TIM11YDR322C-A VPS29P38759 282 aa4.5□□□□□ -1.69
TIM11YDR322C-A SET4P42948 560 aa4.49□□□□□ -1.69
TIM11YDR322C-A YNL035CP53962 389 aaKnown RBP4.49□□□□□ -1.69
TIM11YDR322C-A SAM3Q08986 587 aa4.49□□□□□ -1.69
TIM11YDR322C-A NCR1Q12200 1170 aa4.48□□□□□ -1.69
TIM11YDR322C-A VMA1P17255 1071 aaKnown RBP4.47□□□□□ -1.69
TIM11YDR322C-A DBP1P24784 617 aaKnown RBP4.47□□□□□ -1.69
TIM11YDR322C-A RPN1P38764 993 aaKnown RBP4.47□□□□□ -1.69
TIM11YDR322C-A RTG3P38165 486 aa4.46□□□□□ -1.7
TIM11YDR322C-A CST9Q06032 482 aa4.46□□□□□ -1.7
TIM11YDR322C-A STS1P38637 319 aa4.45□□□□□ -1.7
TIM11YDR322C-A ABP1P15891 592 aaKnown RBP4.44□□□□□ -1.7
TIM11YDR322C-A YFR006WP43590 535 aa4.43□□□□□ -1.7
TIM11YDR322C-A CKB1P43639 278 aa4.43□□□□□ -1.7
TIM11YDR322C-A IFH1P39520 1085 aa4.42□□□□□ -1.7
TIM11YDR322C-A DAN4P47179 1161 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms