RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W MTC1P47018 478 aaKnown RBP11.18□□□□□ -0.62
SSF2YDR312W FAP1P53971 965 aa10.77□□□□□ -0.69
SSF2YDR312W DRS1P32892 752 aaKnown RBP10.68□□□□□ -0.7
SSF2YDR312W PRY3P47033 881 aa10.14□□□□□ -0.79
SSF2YDR312W AAD16Q02895 342 aa9.75□□□□□ -0.85
SSF2YDR312W PRI1P10363 409 aa9.7□□□□□ -0.86
SSF2YDR312W HAA1Q12753 694 aaKnown RBP9.5□□□□□ -0.89
SSF2YDR312W YCK3P39962 524 aa9.48□□□□□ -0.89
SSF2YDR312W ISW2Q08773 1120 aa9.31□□□□□ -0.92
SSF2YDR312W DIP2Q12220 943 aaPredicted RBP9.28□□□□□ -0.92
SSF2YDR312W RPG1P38249 964 aaKnown RBP9.21□□□□□ -0.94
SSF2YDR312W TSR3Q12094 313 aaKnown RBP9.11□□□□□ -0.95
SSF2YDR312W AVT3P36062 692 aa9.01□□□□□ -0.97
SSF2YDR312W BFR2Q06631 534 aaKnown RBP8.99□□□□□ -0.97
SSF2YDR312W RSE1Q04693 1361 aaKnown RBP8.91□□□□□ -0.98
SSF2YDR312W MRPL32P25348 183 aa8.81□□□□□ -1
SSF2YDR312W YGL015CP33199 130 aa8.69□□□□□ -1.02
SSF2YDR312W RPL17AP05740 184 aaKnown RBP8.61□□□□□ -1.03
SSF2YDR312W RPL17BP46990 184 aaKnown RBP8.61□□□□□ -1.03
SSF2YDR312W REB1P21538 810 aa8.55□□□□□ -1.04
SSF2YDR312W BUD31P25337 157 aaPredicted RBP8.26□□□□□ -1.09
SSF2YDR312W SPT21P35209 758 aa8.25□□□□□ -1.09
SSF2YDR312W CDC27P38042 758 aa8.16□□□□□ -1.1
SSF2YDR312W TFA1P36100 482 aa8.1□□□□□ -1.11
SSF2YDR312W YKR023WP36119 530 aaKnown RBP8.1□□□□□ -1.11
SSF2YDR312W UBP10P53874 792 aaPredicted RBP8.09□□□□□ -1.12
SSF2YDR312W RIM101P33400 625 aa8.03□□□□□ -1.12
SSF2YDR312W MAP2P38174 421 aaKnown RBP8.01□□□□□ -1.13
SSF2YDR312W TFC8Q12308 588 aa7.95□□□□□ -1.14
SSF2YDR312W HOP09932 586 aa7.93□□□□□ -1.14
SSF2YDR312W DCD1P06773 312 aa7.88□□□□□ -1.15
SSF2YDR312W SIS1P25294 352 aaKnown RBP7.82□□□□□ -1.16
SSF2YDR312W TIF4632P39936 914 aaKnown RBP7.8□□□□□ -1.16
SSF2YDR312W UBP9P39967 754 aa7.79□□□□□ -1.16
SSF2YDR312W OXP1P28273 1286 aa7.76□□□□□ -1.17
SSF2YDR312W TGL3P40308 642 aa7.76□□□□□ -1.17
SSF2YDR312W SCY1P53009 804 aa7.72□□□□□ -1.17
SSF2YDR312W SLX5P32828 619 aaKnown RBP7.7□□□□□ -1.18
SSF2YDR312W BCH2P36122 765 aa7.7□□□□□ -1.18
SSF2YDR312W YIL055CP40523 627 aaKnown RBP7.65□□□□□ -1.18
SSF2YDR312W PTP3P40048 928 aa7.62□□□□□ -1.19
SSF2YDR312W YAH1Q12184 172 aaKnown RBP7.56□□□□□ -1.2
SSF2YDR312W RSM7P47150 247 aa7.54□□□□□ -1.2
SSF2YDR312W EPS1P40557 701 aa7.52□□□□□ -1.21
SSF2YDR312W BDF1P35817 686 aa7.48□□□□□ -1.21
SSF2YDR312W YLR271WQ06152 274 aa7.46□□□□□ -1.22
SSF2YDR312W AI2P03876 854 aa7.45□□□□□ -1.22
SSF2YDR312W BBC1P47068 1157 aa7.44□□□□□ -1.22
SSF2YDR312W SSP1P38871 571 aa7.43□□□□□ -1.22
SSF2YDR312W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
SSF2YDR312W MST1P07236 462 aa7.33□□□□□ -1.24
SSF2YDR312W PSD2P53037 1138 aaKnown RBP7.32□□□□□ -1.24
SSF2YDR312W YBL029C-AQ3E756 94 aa7.3□□□□□ -1.24
SSF2YDR312W YOR238WQ08634 303 aa7.28□□□□□ -1.24
SSF2YDR312W MGA2P40578 1113 aa7.22□□□□□ -1.25
SSF2YDR312W NSR1P27476 414 aaKnown RBP RIP-Chip data7.21□□□□□ -1.25not detected
SSF2YDR312W VNX1P42839 908 aa7.21□□□□□ -1.25
SSF2YDR312W CST9Q06032 482 aa7.2□□□□□ -1.26
SSF2YDR312W MRM1P25270 412 aa7.19□□□□□ -1.26
SSF2YDR312W YAP5P40574 245 aa7.16□□□□□ -1.26
SSF2YDR312W SPP1Q03012 353 aa7.16□□□□□ -1.26
SSF2YDR312W YJL171CP46992 396 aa7.1□□□□□ -1.27
SSF2YDR312W WSC3Q12215 556 aa7.08□□□□□ -1.28
SSF2YDR312W AIR2Q12476 344 aaKnown RBP7.07□□□□□ -1.28
SSF2YDR312W RTG3P38165 486 aa7.06□□□□□ -1.28
SSF2YDR312W TIF11P38912 153 aaKnown RBP7.04□□□□□ -1.28
SSF2YDR312W VPS29P38759 282 aa7.03□□□□□ -1.28
SSF2YDR312W FKH1P40466 484 aa7.02□□□□□ -1.29
SSF2YDR312W PIB1Q06651 286 aa7.01□□□□□ -1.29
SSF2YDR312W RCR1P38212 213 aa7□□□□□ -1.29
SSF2YDR312W YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
SSF2YDR312W GTT3P39996 337 aa6.98□□□□□ -1.29
SSF2YDR312W DBP1P24784 617 aaKnown RBP6.97□□□□□ -1.29
SSF2YDR312W STS1P38637 319 aa6.94□□□□□ -1.3
SSF2YDR312W YFR006WP43590 535 aa6.94□□□□□ -1.3
SSF2YDR312W BMT6Q12291 365 aa6.92□□□□□ -1.3
SSF2YDR312W LDB19Q12502 818 aa6.92□□□□□ -1.3
SSF2YDR312W ULI1P43604 169 aa6.91□□□□□ -1.3
SSF2YDR312W IOC2Q12072 812 aa6.88□□□□□ -1.31
SSF2YDR312W VMA1P17255 1071 aaKnown RBP6.87□□□□□ -1.31
SSF2YDR312W RAM2P29703 316 aa6.86□□□□□ -1.31
SSF2YDR312W MSB4Q12317 492 aa6.83□□□□□ -1.32
SSF2YDR312W YOL036WQ08206 761 aa6.82□□□□□ -1.32
SSF2YDR312W SAM3Q08986 587 aa6.82□□□□□ -1.32
SSF2YDR312W MAK11P20484 414 aaKnown RBP6.82□□□□□ -1.32
SSF2YDR312W EAP1P36041 632 aaKnown RBP6.81□□□□□ -1.32
SSF2YDR312W SET4P42948 560 aa6.81□□□□□ -1.32
SSF2YDR312W MIF2P35201 549 aa6.74□□□□□ -1.33
SSF2YDR312W NCR1Q12200 1170 aa6.74□□□□□ -1.33
SSF2YDR312W TRP5P00931 707 aaKnown RBP6.73□□□□□ -1.33
SSF2YDR312W RTG1P32607 177 aa6.73□□□□□ -1.33
SSF2YDR312W GYP5Q12344 894 aa6.73□□□□□ -1.33
SSF2YDR312W ABP1P15891 592 aaKnown RBP6.72□□□□□ -1.33
SSF2YDR312W COQ8P27697 501 aa6.72□□□□□ -1.33
SSF2YDR312W EDS1P38073 919 aa6.71□□□□□ -1.33
SSF2YDR312W SEC61P32915 480 aa6.69□□□□□ -1.34
SSF2YDR312W PTC3P34221 468 aaKnown RBP6.69□□□□□ -1.34
SSF2YDR312W DCW1P36091 449 aa6.68□□□□□ -1.34
SSF2YDR312W YNL035CP53962 389 aaKnown RBP6.68□□□□□ -1.34
SSF2YDR312W GRE2Q12068 342 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms