RNA–Protein interactions for RNA: YDR302W

GPI11, Transcript of ER membrane protein involved in a late step of GPI anchor assembly, yeastyeast

Gene GPI11, Length 660 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPI11YDR302W MTC1P47018 478 aaKnown RBP14.05□□□□□ -0.16
GPI11YDR302W DRS1P32892 752 aaKnown RBP12.97□□□□□ -0.33
GPI11YDR302W FAP1P53971 965 aa12.94□□□□□ -0.34
GPI11YDR302W PRY3P47033 881 aa12.13□□□□□ -0.47
GPI11YDR302W PRI1P10363 409 aa11.92□□□□□ -0.5
GPI11YDR302W AAD16Q02895 342 aa11.9□□□□□ -0.5
GPI11YDR302W ISW2Q08773 1120 aa11.72□□□□□ -0.53
GPI11YDR302W RPG1P38249 964 aaKnown RBP11.58□□□□□ -0.56
GPI11YDR302W DIP2Q12220 943 aaPredicted RBP11.42□□□□□ -0.58
GPI11YDR302W HAA1Q12753 694 aaKnown RBP11.34□□□□□ -0.59
GPI11YDR302W YCK3P39962 524 aa11.31□□□□□ -0.6
GPI11YDR302W TSR3Q12094 313 aaKnown RBP11.3□□□□□ -0.6
GPI11YDR302W RSE1Q04693 1361 aaKnown RBP11.1□□□□□ -0.63
GPI11YDR302W AVT3P36062 692 aa10.9□□□□□ -0.66
GPI11YDR302W MRPL32P25348 183 aa10.88□□□□□ -0.67
GPI11YDR302W RPL17AP05740 184 aaKnown RBP10.77□□□□□ -0.69
GPI11YDR302W REB1P21538 810 aa10.77□□□□□ -0.69
GPI11YDR302W RPL17BP46990 184 aaKnown RBP10.77□□□□□ -0.69
GPI11YDR302W BFR2Q06631 534 aaKnown RBP10.7□□□□□ -0.7
GPI11YDR302W YGL015CP33199 130 aa10.46□□□□□ -0.73
GPI11YDR302W CDC27P38042 758 aa10.24□□□□□ -0.77
GPI11YDR302W SPT21P35209 758 aa10.21□□□□□ -0.77
GPI11YDR302W SGS1P35187 1447 aa10.16□□□□□ -0.78
GPI11YDR302W YKR023WP36119 530 aaKnown RBP10.16□□□□□ -0.78
GPI11YDR302W SPA2P23201 1466 aaKnown RBP10.12□□□□□ -0.79
GPI11YDR302W HOP09932 586 aa10□□□□□ -0.81
GPI11YDR302W UBP10P53874 792 aaPredicted RBP10□□□□□ -0.81
GPI11YDR302W DCD1P06773 312 aa9.96□□□□□ -0.82
GPI11YDR302W MAP2P38174 421 aaKnown RBP9.96□□□□□ -0.82
GPI11YDR302W TFC8Q12308 588 aa9.96□□□□□ -0.82
GPI11YDR302W SSN2P38931 1420 aa9.94□□□□□ -0.82
GPI11YDR302W INO80P53115 1489 aa9.9□□□□□ -0.83
GPI11YDR302W RIM101P33400 625 aa9.83□□□□□ -0.84
GPI11YDR302W SCY1P53009 804 aa9.75□□□□□ -0.85
GPI11YDR302W BUD31P25337 157 aaPredicted RBP9.71□□□□□ -0.86
GPI11YDR302W SLX5P32828 619 aaKnown RBP9.65□□□□□ -0.86
GPI11YDR302W BCH2P36122 765 aa9.64□□□□□ -0.87
GPI11YDR302W TIF4632P39936 914 aaKnown RBP9.64□□□□□ -0.87
GPI11YDR302W TCB3Q03640 1545 aaKnown RBP9.54□□□□□ -0.88
GPI11YDR302W TGL3P40308 642 aa9.53□□□□□ -0.88
GPI11YDR302W OXP1P28273 1286 aa9.49□□□□□ -0.89
GPI11YDR302W SKI3P17883 1432 aaKnown RBP9.47□□□□□ -0.89
GPI11YDR302W YIL055CP40523 627 aaKnown RBP9.45□□□□□ -0.9
GPI11YDR302W PTP3P40048 928 aa9.44□□□□□ -0.9
GPI11YDR302W EPS1P40557 701 aa9.4□□□□□ -0.9
GPI11YDR302W TY1B-DR4Q07793 1604 aa9.37□□□□□ -0.91
GPI11YDR302W UBP9P39967 754 aa9.36□□□□□ -0.91
GPI11YDR302W BDF1P35817 686 aa9.35□□□□□ -0.91
GPI11YDR302W TFA1P36100 482 aa9.27□□□□□ -0.93
GPI11YDR302W YAH1Q12184 172 aaKnown RBP9.27□□□□□ -0.93
GPI11YDR302W HSL1P34244 1518 aa9.26□□□□□ -0.93
GPI11YDR302W RSM7P47150 247 aa9.26□□□□□ -0.93
GPI11YDR302W CHD1P32657 1468 aa9.25□□□□□ -0.93
GPI11YDR302W BBC1P47068 1157 aa9.24□□□□□ -0.93
GPI11YDR302W SIS1P25294 352 aaKnown RBP9.22□□□□□ -0.93
GPI11YDR302W SPT6P23615 1451 aaKnown RBP9.21□□□□□ -0.94
GPI11YDR302W AI2P03876 854 aa9.18□□□□□ -0.94
GPI11YDR302W MMS22Q06164 1454 aa9.13□□□□□ -0.95
GPI11YDR302W HIR3P47171 1648 aa9.13□□□□□ -0.95
GPI11YDR302W XRN1P22147 1528 aaKnown RBP9.12□□□□□ -0.95
GPI11YDR302W YOR238WQ08634 303 aa9.12□□□□□ -0.95
GPI11YDR302W MST1P07236 462 aa9.08□□□□□ -0.96
GPI11YDR302W SIN3P22579 1536 aa9.07□□□□□ -0.96
GPI11YDR302W YLR271WQ06152 274 aa9.04□□□□□ -0.96
GPI11YDR302W REV3P14284 1504 aa9.04□□□□□ -0.96
GPI11YDR302W THO2P53552 1597 aaKnown RBP9.03□□□□□ -0.96
GPI11YDR302W NSR1P27476 414 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
GPI11YDR302W YAP5P40574 245 aa9.02□□□□□ -0.97
GPI11YDR302W YBL029C-AQ3E756 94 aa9.02□□□□□ -0.97
GPI11YDR302W SSK2P53599 1579 aa8.99□□□□□ -0.97
GPI11YDR302W SSP1P38871 571 aa8.92□□□□□ -0.98
GPI11YDR302W UFD4P33202 1483 aa8.91□□□□□ -0.98
GPI11YDR302W PSD2P53037 1138 aaKnown RBP8.91□□□□□ -0.98
GPI11YDR302W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
GPI11YDR302W STU1P38198 1513 aa8.9□□□□□ -0.98
GPI11YDR302W SWR1Q05471 1514 aa8.9□□□□□ -0.98
GPI11YDR302W VNX1P42839 908 aa8.9□□□□□ -0.98
GPI11YDR302W POL1P13382 1468 aa8.89□□□□□ -0.99
GPI11YDR302W WSC3Q12215 556 aa8.89□□□□□ -0.99
GPI11YDR302W MYO2P19524 1574 aaKnown RBP8.89□□□□□ -0.99
GPI11YDR302W MON2P48563 1636 aaPredicted RBP8.88□□□□□ -0.99
GPI11YDR302W GTT3P39996 337 aa8.88□□□□□ -0.99
GPI11YDR302W YTA7P40340 1379 aa8.87□□□□□ -0.99
GPI11YDR302W ESP1Q03018 1630 aa8.87□□□□□ -0.99
GPI11YDR302W MRM1P25270 412 aa8.86□□□□□ -0.99
GPI11YDR302W SPP1Q03012 353 aa8.86□□□□□ -0.99
GPI11YDR302W TAF2P23255 1407 aa8.86□□□□□ -0.99
GPI11YDR302W TRM732Q03496 1420 aa8.81□□□□□ -1
GPI11YDR302W ECM5Q03214 1411 aa8.8□□□□□ -1
GPI11YDR302W NOP2P40991 618 aaKnown RBP8.8□□□□□ -1
GPI11YDR302W PIB1Q06651 286 aa8.8□□□□□ -1
GPI11YDR302W IKI3Q06706 1349 aaKnown RBP8.8□□□□□ -1
GPI11YDR302W YPK9Q12697 1472 aa8.77□□□□□ -1.01
GPI11YDR302W SPP41P38904 1435 aa8.76□□□□□ -1.01
GPI11YDR302W TIF11P38912 153 aaKnown RBP8.75□□□□□ -1.01
GPI11YDR302W MYO4P32492 1471 aa8.74□□□□□ -1.01
GPI11YDR302W NUP170P38181 1502 aa8.74□□□□□ -1.01
GPI11YDR302W DNA2P38859 1522 aa8.73□□□□□ -1.01
GPI11YDR302W BPT1P14772 1559 aa8.73□□□□□ -1.01
GPI11YDR302W BUD4P47136 1447 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms