RNA–Protein interactions for RNA: YDR268W

MSW1, Transcript of Mitochondrial tryptophanyl-tRNA synthetase, yeastyeast

Gene MSW1, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSW1YDR268W MTC1P47018 478 aaKnown RBP13.68□□□□□ -0.22
MSW1YDR268W DRS1P32892 752 aaKnown RBP12.62□□□□□ -0.39
MSW1YDR268W FAP1P53971 965 aa12.57□□□□□ -0.4
MSW1YDR268W PRY3P47033 881 aa11.82□□□□□ -0.52
MSW1YDR268W PRI1P10363 409 aa11.61□□□□□ -0.55
MSW1YDR268W AAD16Q02895 342 aa11.55□□□□□ -0.56
MSW1YDR268W ISW2Q08773 1120 aa11.37□□□□□ -0.59
MSW1YDR268W RPG1P38249 964 aaKnown RBP11.23□□□□□ -0.61
MSW1YDR268W DIP2Q12220 943 aaPredicted RBP11.12□□□□□ -0.63
MSW1YDR268W YCK3P39962 524 aa11.04□□□□□ -0.64
MSW1YDR268W HAA1Q12753 694 aaKnown RBP10.99□□□□□ -0.65
MSW1YDR268W TSR3Q12094 313 aaKnown RBP10.93□□□□□ -0.66
MSW1YDR268W RSE1Q04693 1361 aaKnown RBP10.8□□□□□ -0.68
MSW1YDR268W AVT3P36062 692 aa10.69□□□□□ -0.7
MSW1YDR268W MRPL32P25348 183 aa10.53□□□□□ -0.72
MSW1YDR268W RPL17AP05740 184 aaKnown RBP10.45□□□□□ -0.74
MSW1YDR268W RPL17BP46990 184 aaKnown RBP10.45□□□□□ -0.74
MSW1YDR268W BFR2Q06631 534 aaKnown RBP10.43□□□□□ -0.74
MSW1YDR268W REB1P21538 810 aa10.42□□□□□ -0.74
MSW1YDR268W YGL015CP33199 130 aa10.14□□□□□ -0.79
MSW1YDR268W SPT21P35209 758 aa10.02□□□□□ -0.81
MSW1YDR268W CDC27P38042 758 aa9.97□□□□□ -0.81
MSW1YDR268W YKR023WP36119 530 aaKnown RBP9.92□□□□□ -0.82
MSW1YDR268W UBP10P53874 792 aaPredicted RBP9.75□□□□□ -0.85
MSW1YDR268W TFC8Q12308 588 aa9.72□□□□□ -0.85
MSW1YDR268W HOP09932 586 aa9.69□□□□□ -0.86
MSW1YDR268W MAP2P38174 421 aaKnown RBP9.67□□□□□ -0.86
MSW1YDR268W DCD1P06773 312 aa9.64□□□□□ -0.87
MSW1YDR268W RIM101P33400 625 aa9.63□□□□□ -0.87
MSW1YDR268W BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
MSW1YDR268W SCY1P53009 804 aa9.46□□□□□ -0.9
MSW1YDR268W BCH2P36122 765 aa9.39□□□□□ -0.91
MSW1YDR268W SLX5P32828 619 aaKnown RBP9.36□□□□□ -0.91
MSW1YDR268W TIF4632P39936 914 aaKnown RBP9.34□□□□□ -0.91
MSW1YDR268W TGL3P40308 642 aa9.29□□□□□ -0.92
MSW1YDR268W OXP1P28273 1286 aa9.28□□□□□ -0.92
MSW1YDR268W EPS1P40557 701 aa9.16□□□□□ -0.94
MSW1YDR268W PTP3P40048 928 aa9.15□□□□□ -0.94
MSW1YDR268W YIL055CP40523 627 aaKnown RBP9.14□□□□□ -0.95
MSW1YDR268W BDF1P35817 686 aa9.11□□□□□ -0.95
MSW1YDR268W TFA1P36100 482 aa9.08□□□□□ -0.96
MSW1YDR268W SIS1P25294 352 aaKnown RBP9.05□□□□□ -0.96
MSW1YDR268W UBP9P39967 754 aa9.05□□□□□ -0.96
MSW1YDR268W RSM7P47150 247 aa9.02□□□□□ -0.97
MSW1YDR268W BBC1P47068 1157 aa8.98□□□□□ -0.97
MSW1YDR268W YAH1Q12184 172 aaKnown RBP8.98□□□□□ -0.97
MSW1YDR268W AI2P03876 854 aa8.95□□□□□ -0.98
MSW1YDR268W MST1P07236 462 aa8.9□□□□□ -0.98
MSW1YDR268W NSR1P27476 414 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
MSW1YDR268W YOR238WQ08634 303 aa8.86□□□□□ -0.99
MSW1YDR268W YLR271WQ06152 274 aa8.84□□□□□ -0.99
MSW1YDR268W YAP5P40574 245 aa8.79□□□□□ -1
MSW1YDR268W PSD2P53037 1138 aaKnown RBP8.75□□□□□ -1.01
MSW1YDR268W YBL029C-AQ3E756 94 aa8.75□□□□□ -1.01
MSW1YDR268W SSP1P38871 571 aa8.7□□□□□ -1.02
MSW1YDR268W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
MSW1YDR268W VNX1P42839 908 aa8.66□□□□□ -1.02
MSW1YDR268W MRM1P25270 412 aa8.61□□□□□ -1.03
MSW1YDR268W WSC3Q12215 556 aa8.59□□□□□ -1.03
MSW1YDR268W GTT3P39996 337 aa8.58□□□□□ -1.04
MSW1YDR268W SPP1Q03012 353 aa8.58□□□□□ -1.04
MSW1YDR268W MGA2P40578 1113 aa8.52□□□□□ -1.05
MSW1YDR268W TIF11P38912 153 aaKnown RBP8.51□□□□□ -1.05
MSW1YDR268W CST9Q06032 482 aa8.51□□□□□ -1.05
MSW1YDR268W PIB1Q06651 286 aa8.5□□□□□ -1.05
MSW1YDR268W RTG3P38165 486 aa8.44□□□□□ -1.06
MSW1YDR268W VPS29P38759 282 aa8.44□□□□□ -1.06
MSW1YDR268W YMR1P47147 688 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
MSW1YDR268W FKH1P40466 484 aa8.43□□□□□ -1.06
MSW1YDR268W MSB4Q12317 492 aa8.41□□□□□ -1.06
MSW1YDR268W AIR2Q12476 344 aaKnown RBP8.41□□□□□ -1.06
MSW1YDR268W ULI1P43604 169 aa8.4□□□□□ -1.06
MSW1YDR268W DBP1P24784 617 aaKnown RBP8.39□□□□□ -1.07
MSW1YDR268W IOC2Q12072 812 aa8.37□□□□□ -1.07
MSW1YDR268W LDB19Q12502 818 aa8.37□□□□□ -1.07
MSW1YDR268W STS1P38637 319 aa8.35□□□□□ -1.07
MSW1YDR268W YOL036WQ08206 761 aa8.35□□□□□ -1.07
MSW1YDR268W EAP1P36041 632 aaKnown RBP8.34□□□□□ -1.07
MSW1YDR268W YFR006WP43590 535 aa8.34□□□□□ -1.07
MSW1YDR268W VMA1P17255 1071 aaKnown RBP8.32□□□□□ -1.08
MSW1YDR268W RCR1P38212 213 aa8.32□□□□□ -1.08
MSW1YDR268W YJL171CP46992 396 aa8.32□□□□□ -1.08
MSW1YDR268W SET4P42948 560 aa8.31□□□□□ -1.08
MSW1YDR268W SAM3Q08986 587 aa8.3□□□□□ -1.08
MSW1YDR268W TRP5P00931 707 aaKnown RBP8.26□□□□□ -1.09
MSW1YDR268W BMT6Q12291 365 aa8.23□□□□□ -1.09
MSW1YDR268W RTG1P32607 177 aa8.22□□□□□ -1.09
MSW1YDR268W YNL035CP53962 389 aaKnown RBP8.19□□□□□ -1.1
MSW1YDR268W ABP1P15891 592 aaKnown RBP8.18□□□□□ -1.1
MSW1YDR268W SEC61P32915 480 aa8.17□□□□□ -1.1
MSW1YDR268W NCR1Q12200 1170 aa8.16□□□□□ -1.1
MSW1YDR268W GYP5Q12344 894 aa8.15□□□□□ -1.1
MSW1YDR268W JIP4Q03361 876 aa8.1□□□□□ -1.11
MSW1YDR268W HTA1P04911 132 aaKnown RBP8.09□□□□□ -1.11
MSW1YDR268W HTA2P04912 132 aa8.09□□□□□ -1.11
MSW1YDR268W DAN4P47179 1161 aa8.09□□□□□ -1.11
MSW1YDR268W MAK11P20484 414 aaKnown RBP8.07□□□□□ -1.12
MSW1YDR268W RAM2P29703 316 aa8.07□□□□□ -1.12
MSW1YDR268W DCW1P36091 449 aa8.07□□□□□ -1.12
MSW1YDR268W TFG1P41895 735 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms