RNA–Protein interactions for RNA: YDR234W

LYS4, Transcript of Homoaconitase, yeastyeast

Gene LYS4, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS4YDR234W SGS1P35187 1447 aa19.47■□□□□ 0.71
LYS4YDR234W INO80P53115 1489 aa18.9■□□□□ 0.62
LYS4YDR234W SSN2P38931 1420 aa18.65■□□□□ 0.58
LYS4YDR234W SPA2P23201 1466 aaKnown RBP18.64■□□□□ 0.58
LYS4YDR234W TCB3Q03640 1545 aaKnown RBP18.64■□□□□ 0.57
LYS4YDR234W TY1B-DR4Q07793 1604 aa18.42■□□□□ 0.54
LYS4YDR234W MON2P48563 1636 aaPredicted RBP18.21■□□□□ 0.51
LYS4YDR234W HSL1P34244 1518 aa18.16■□□□□ 0.5
LYS4YDR234W DRS1P32892 752 aaKnown RBP18.12■□□□□ 0.49
LYS4YDR234W SPT6P23615 1451 aaKnown RBP18.11■□□□□ 0.49
LYS4YDR234W SWR1Q05471 1514 aa17.99■□□□□ 0.47
LYS4YDR234W HIR3P47171 1648 aa17.85■□□□□ 0.45
LYS4YDR234W XRN1P22147 1528 aaKnown RBP17.79■□□□□ 0.44
LYS4YDR234W REV3P14284 1504 aa17.51■□□□□ 0.39
LYS4YDR234W DNA2P38859 1522 aa17.43■□□□□ 0.38
LYS4YDR234W TAF2P23255 1407 aa17.42■□□□□ 0.38
LYS4YDR234W SIN3P22579 1536 aa17.31■□□□□ 0.36
LYS4YDR234W THO2P53552 1597 aaKnown RBP17.31■□□□□ 0.36
LYS4YDR234W KOG1P38873 1557 aa17.3■□□□□ 0.36
LYS4YDR234W SSK2P53599 1579 aa17.27■□□□□ 0.36
LYS4YDR234W ECM5Q03214 1411 aa17.15■□□□□ 0.34
LYS4YDR234W BUD4P47136 1447 aa17.15■□□□□ 0.34
LYS4YDR234W ESP1Q03018 1630 aa17.12■□□□□ 0.33
LYS4YDR234W SKI3P17883 1432 aaKnown RBP17.04■□□□□ 0.32
LYS4YDR234W ATG2P53855 1592 aa17.03■□□□□ 0.32
LYS4YDR234W MYO2P19524 1574 aaKnown RBP17.01■□□□□ 0.31
LYS4YDR234W PEP1P32319 1579 aa16.86■□□□□ 0.29
LYS4YDR234W YPK9Q12697 1472 aa16.85■□□□□ 0.29
LYS4YDR234W POL1P13382 1468 aa16.84■□□□□ 0.29
LYS4YDR234W STU1P38198 1513 aa16.84■□□□□ 0.29
LYS4YDR234W MDS3P53094 1487 aa16.84■□□□□ 0.29
LYS4YDR234W MMS22Q06164 1454 aa16.78■□□□□ 0.28
LYS4YDR234W CHD1P32657 1468 aa16.74■□□□□ 0.27
LYS4YDR234W SCC2Q04002 1493 aa16.72■□□□□ 0.27
LYS4YDR234W BPT1P14772 1559 aa16.67■□□□□ 0.26
LYS4YDR234W YTA7P40340 1379 aa16.65■□□□□ 0.26
LYS4YDR234W RKR1Q04781 1562 aa16.65■□□□□ 0.26
LYS4YDR234W SAS10Q12136 610 aaPredicted RBP16.63■□□□□ 0.25
LYS4YDR234W RPO31P04051 1460 aa16.61■□□□□ 0.25
LYS4YDR234W UFD4P33202 1483 aa16.59■□□□□ 0.25
LYS4YDR234W YOR1P53049 1477 aa16.58■□□□□ 0.24
LYS4YDR234W TOP2P06786 1428 aaKnown RBP16.52■□□□□ 0.24
LYS4YDR234W YCF1P39109 1515 aaKnown RBP16.49■□□□□ 0.23
LYS4YDR234W TY2B-LR1P0C2J3 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-FP0CX63 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-GR2P0CX64 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-CP25384 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-DR2Q03494 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY1B-DR1Q03855 1755 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-DR3Q07791 1770 aaKnown RBP16.44■□□□□ 0.22
LYS4YDR234W TY2B-OR1Q12113 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-DR1Q12472 1770 aa16.44■□□□□ 0.22
LYS4YDR234W TY2B-OR2Q12501 1770 aa16.44■□□□□ 0.22
LYS4YDR234W SMC4Q12267 1418 aa16.44■□□□□ 0.22
LYS4YDR234W MYO4P32492 1471 aa16.42■□□□□ 0.22
LYS4YDR234W RSE1Q04693 1361 aaKnown RBP16.39■□□□□ 0.21
LYS4YDR234W TY1B-DR3Q99231 1755 aa16.37■□□□□ 0.21
LYS4YDR234W TY2B-BQ12491 1770 aa16.3■□□□□ 0.2
LYS4YDR234W RQC2Q12532 1038 aaKnown RBP16.3■□□□□ 0.2
LYS4YDR234W STH1P32597 1359 aa16.28■□□□□ 0.2
LYS4YDR234W SNQ2P32568 1501 aaKnown RBP16.27■□□□□ 0.2
LYS4YDR234W TRM732Q03496 1420 aa16.23■□□□□ 0.19
LYS4YDR234W TAF7Q05021 590 aa16.18■□□□□ 0.18
LYS4YDR234W SPP41P38904 1435 aa16.17■□□□□ 0.18
LYS4YDR234W TY1B-HO13535 1793 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-DR5P0C2I2 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-DR6P0C2I3 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-LR2P0C2I5 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-LR3P0C2I6 1755 aaKnown RBP16.16■□□□□ 0.18
LYS4YDR234W TY1B-PR1P0C2I9 1755 aaKnown RBP16.16■□□□□ 0.18
LYS4YDR234W TY1B-PR2P0C2J0 1756 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-PR3P0C2J1 1755 aaKnown RBP16.16■□□□□ 0.18
LYS4YDR234W TY1B-JR1P47098 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-ML2Q03434 1755 aaKnown RBP16.16■□□□□ 0.18
LYS4YDR234W TY1B-ER1Q03612 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-ML1Q04711 1755 aaKnown RBP16.16■□□□□ 0.18
LYS4YDR234W TY1B-BRQ12193 1756 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-GR2Q12269 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-OLQ12273 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-GR3Q12316 1755 aa16.16■□□□□ 0.18
LYS4YDR234W TY1B-PLQ12414 1755 aaKnown RBP16.16■□□□□ 0.18
LYS4YDR234W TY1B-ORQ92393 1755 aa16.16■□□□□ 0.18
LYS4YDR234W IFH1P39520 1085 aa16.14■□□□□ 0.17
LYS4YDR234W MLP2P40457 1679 aa16.12■□□□□ 0.17
LYS4YDR234W PDR15Q04182 1529 aaKnown RBP16.11■□□□□ 0.17
LYS4YDR234W IKI3Q06706 1349 aaKnown RBP16.09■□□□□ 0.17
LYS4YDR234W CDC25P04821 1589 aa16.07■□□□□ 0.16
LYS4YDR234W TSC11P40061 1430 aa16.05■□□□□ 0.16
LYS4YDR234W VTH1P40438 1549 aa16.03■□□□□ 0.16
LYS4YDR234W VTH2P40890 1549 aa16.03■□□□□ 0.16
LYS4YDR234W ULS1Q08562 1619 aa16.02■□□□□ 0.16
LYS4YDR234W GEA1P47102 1408 aaPredicted RBP16.02■□□□□ 0.16
LYS4YDR234W PAN1P32521 1480 aa16.01■□□□□ 0.15
LYS4YDR234W SSM4P40318 1319 aa15.94■□□□□ 0.14
LYS4YDR234W ESC1Q03661 1658 aaKnown RBP15.94■□□□□ 0.14
LYS4YDR234W MTC1P47018 478 aaKnown RBP15.93■□□□□ 0.14
LYS4YDR234W TY1B-JR2P47100 1755 aaKnown RBP15.91■□□□□ 0.14
LYS4YDR234W TY1B-ER2Q03619 1755 aa15.91■□□□□ 0.14
LYS4YDR234W TY1B-MR1Q04214 1755 aa15.91■□□□□ 0.14
LYS4YDR234W TY1B-MR2Q04670 1755 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms