RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR220CYDR220C MTC1P47018 478 aaKnown RBP17.7■□□□□ 0.42
YDR220CYDR220C DRS1P32892 752 aaKnown RBP16.38■□□□□ 0.21
YDR220CYDR220C FAP1P53971 965 aa16.12■□□□□ 0.17
YDR220CYDR220C PRY3P47033 881 aa15.17■□□□□ 0.02
YDR220CYDR220C PRI1P10363 409 aa15.01□□□□□ -0.01
YDR220CYDR220C AAD16Q02895 342 aa14.91□□□□□ -0.02
YDR220CYDR220C ISW2Q08773 1120 aa14.65□□□□□ -0.06
YDR220CYDR220C RPG1P38249 964 aaKnown RBP14.57□□□□□ -0.08
YDR220CYDR220C YCK3P39962 524 aa14.41□□□□□ -0.1
YDR220CYDR220C DIP2Q12220 943 aaPredicted RBP14.41□□□□□ -0.1
YDR220CYDR220C TSR3Q12094 313 aaKnown RBP14.23□□□□□ -0.13
YDR220CYDR220C HAA1Q12753 694 aaKnown RBP14.15□□□□□ -0.14
YDR220CYDR220C RSE1Q04693 1361 aaKnown RBP13.94□□□□□ -0.18
YDR220CYDR220C AVT3P36062 692 aa13.85□□□□□ -0.19
YDR220CYDR220C MRPL32P25348 183 aa13.58□□□□□ -0.24
YDR220CYDR220C RPL17AP05740 184 aaKnown RBP13.56□□□□□ -0.24
YDR220CYDR220C RPL17BP46990 184 aaKnown RBP13.56□□□□□ -0.24
YDR220CYDR220C BFR2Q06631 534 aaKnown RBP13.53□□□□□ -0.24
YDR220CYDR220C REB1P21538 810 aa13.47□□□□□ -0.25
YDR220CYDR220C YGL015CP33199 130 aa13.04□□□□□ -0.32
YDR220CYDR220C SPT21P35209 758 aa12.98□□□□□ -0.33
YDR220CYDR220C CDC27P38042 758 aa12.97□□□□□ -0.33
YDR220CYDR220C YKR023WP36119 530 aaKnown RBP12.89□□□□□ -0.35
YDR220CYDR220C HOP09932 586 aa12.64□□□□□ -0.39
YDR220CYDR220C DCD1P06773 312 aa12.63□□□□□ -0.39
YDR220CYDR220C TFC8Q12308 588 aa12.59□□□□□ -0.39
YDR220CYDR220C MAP2P38174 421 aaKnown RBP12.56□□□□□ -0.4
YDR220CYDR220C UBP10P53874 792 aaPredicted RBP12.52□□□□□ -0.41
YDR220CYDR220C RIM101P33400 625 aa12.46□□□□□ -0.41
YDR220CYDR220C SCY1P53009 804 aa12.27□□□□□ -0.45
YDR220CYDR220C BCH2P36122 765 aa12.19□□□□□ -0.46
YDR220CYDR220C OXP1P28273 1286 aa12.09□□□□□ -0.47
YDR220CYDR220C SLX5P32828 619 aaKnown RBP12.08□□□□□ -0.48
YDR220CYDR220C BUD31P25337 157 aaPredicted RBP12.06□□□□□ -0.48
YDR220CYDR220C TIF4632P39936 914 aaKnown RBP11.98□□□□□ -0.49
YDR220CYDR220C TGL3P40308 642 aa11.94□□□□□ -0.5
YDR220CYDR220C EPS1P40557 701 aa11.86□□□□□ -0.51
YDR220CYDR220C PTP3P40048 928 aa11.85□□□□□ -0.51
YDR220CYDR220C BDF1P35817 686 aa11.82□□□□□ -0.52
YDR220CYDR220C YIL055CP40523 627 aaKnown RBP11.82□□□□□ -0.52
YDR220CYDR220C TFA1P36100 482 aa11.74□□□□□ -0.53
YDR220CYDR220C YAH1Q12184 172 aaKnown RBP11.7□□□□□ -0.54
YDR220CYDR220C RSM7P47150 247 aa11.67□□□□□ -0.54
YDR220CYDR220C AI2P03876 854 aa11.59□□□□□ -0.55
YDR220CYDR220C UBP9P39967 754 aa11.59□□□□□ -0.55
YDR220CYDR220C BBC1P47068 1157 aa11.56□□□□□ -0.56
YDR220CYDR220C YLR271WQ06152 274 aa11.49□□□□□ -0.57
YDR220CYDR220C SIS1P25294 352 aaKnown RBP11.45□□□□□ -0.58
YDR220CYDR220C MST1P07236 462 aa11.44□□□□□ -0.58
YDR220CYDR220C YOR238WQ08634 303 aa11.39□□□□□ -0.59
YDR220CYDR220C NSR1P27476 414 aaKnown RBP RIP-Chip data11.36□□□□□ -0.59not detected
YDR220CYDR220C YBL029C-AQ3E756 94 aa11.35□□□□□ -0.59
YDR220CYDR220C PSD2P53037 1138 aaKnown RBP11.33□□□□□ -0.6
YDR220CYDR220C YAP5P40574 245 aa11.3□□□□□ -0.6
YDR220CYDR220C SSP1P38871 571 aa11.26□□□□□ -0.61
YDR220CYDR220C MRM1P25270 412 aa11.19□□□□□ -0.62
YDR220CYDR220C VNX1P42839 908 aa11.18□□□□□ -0.62
YDR220CYDR220C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
YDR220CYDR220C WSC3Q12215 556 aa11.14□□□□□ -0.63
YDR220CYDR220C PIB1Q06651 286 aa11.12□□□□□ -0.63
YDR220CYDR220C CST9Q06032 482 aa11.11□□□□□ -0.63
YDR220CYDR220C SPP1Q03012 353 aa11.07□□□□□ -0.64
YDR220CYDR220C GTT3P39996 337 aa11.05□□□□□ -0.64
YDR220CYDR220C MGA2P40578 1113 aa11□□□□□ -0.65
YDR220CYDR220C TIF11P38912 153 aaKnown RBP10.95□□□□□ -0.66
YDR220CYDR220C VPS29P38759 282 aa10.94□□□□□ -0.66
YDR220CYDR220C RTG3P38165 486 aa10.89□□□□□ -0.67
YDR220CYDR220C DBP1P24784 617 aaKnown RBP10.88□□□□□ -0.67
YDR220CYDR220C RCR1P38212 213 aa10.88□□□□□ -0.67
YDR220CYDR220C YFR006WP43590 535 aa10.88□□□□□ -0.67
YDR220CYDR220C YMR1P47147 688 aaKnown RBP RIP-Chip data10.88□□□□□ -0.67not detected
YDR220CYDR220C STS1P38637 319 aa10.85□□□□□ -0.67
YDR220CYDR220C AIR2Q12476 344 aaKnown RBP10.84□□□□□ -0.67
YDR220CYDR220C FKH1P40466 484 aa10.83□□□□□ -0.68
YDR220CYDR220C ULI1P43604 169 aa10.83□□□□□ -0.68
YDR220CYDR220C LDB19Q12502 818 aa10.82□□□□□ -0.68
YDR220CYDR220C IOC2Q12072 812 aa10.81□□□□□ -0.68
YDR220CYDR220C SET4P42948 560 aa10.78□□□□□ -0.68
YDR220CYDR220C YOL036WQ08206 761 aa10.78□□□□□ -0.68
YDR220CYDR220C VMA1P17255 1071 aaKnown RBP10.75□□□□□ -0.69
YDR220CYDR220C MSB4Q12317 492 aa10.75□□□□□ -0.69
YDR220CYDR220C YJL171CP46992 396 aa10.68□□□□□ -0.7
YDR220CYDR220C TRP5P00931 707 aaKnown RBP10.67□□□□□ -0.7
YDR220CYDR220C EAP1P36041 632 aaKnown RBP10.67□□□□□ -0.7
YDR220CYDR220C SAM3Q08986 587 aa10.66□□□□□ -0.7
YDR220CYDR220C RTG1P32607 177 aa10.6□□□□□ -0.71
YDR220CYDR220C BMT6Q12291 365 aa10.56□□□□□ -0.72
YDR220CYDR220C YNL035CP53962 389 aaKnown RBP10.53□□□□□ -0.72
YDR220CYDR220C GYP5Q12344 894 aa10.52□□□□□ -0.73
YDR220CYDR220C NCR1Q12200 1170 aa10.51□□□□□ -0.73
YDR220CYDR220C RAM2P29703 316 aa10.48□□□□□ -0.73
YDR220CYDR220C SEC61P32915 480 aa10.47□□□□□ -0.73
YDR220CYDR220C DCW1P36091 449 aa10.46□□□□□ -0.73
YDR220CYDR220C DAN4P47179 1161 aa10.44□□□□□ -0.74
YDR220CYDR220C HTA1P04911 132 aaKnown RBP10.42□□□□□ -0.74
YDR220CYDR220C HTA2P04912 132 aa10.42□□□□□ -0.74
YDR220CYDR220C ABP1P15891 592 aaKnown RBP10.41□□□□□ -0.74
YDR220CYDR220C MAK11P20484 414 aaKnown RBP10.4□□□□□ -0.74
YDR220CYDR220C MIF2P35201 549 aa10.39□□□□□ -0.75
YDR220CYDR220C EDS1P38073 919 aa10.38□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms