RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C MTC1P47018 478 aaKnown RBP15.39■□□□□ 0.05
SPR28YDR218C DRS1P32892 752 aaKnown RBP14.3□□□□□ -0.12
SPR28YDR218C FAP1P53971 965 aa13.84□□□□□ -0.19
SPR28YDR218C PRY3P47033 881 aa13.04□□□□□ -0.32
SPR28YDR218C PRI1P10363 409 aa13□□□□□ -0.33
SPR28YDR218C AAD16Q02895 342 aa12.89□□□□□ -0.35
SPR28YDR218C ISW2Q08773 1120 aa12.69□□□□□ -0.38
SPR28YDR218C RPG1P38249 964 aaKnown RBP12.61□□□□□ -0.39
SPR28YDR218C DIP2Q12220 943 aaPredicted RBP12.55□□□□□ -0.4
SPR28YDR218C YCK3P39962 524 aa12.47□□□□□ -0.41
SPR28YDR218C TSR3Q12094 313 aaKnown RBP12.3□□□□□ -0.44
SPR28YDR218C HAA1Q12753 694 aaKnown RBP12.19□□□□□ -0.46
SPR28YDR218C AVT3P36062 692 aa12.13□□□□□ -0.47
SPR28YDR218C RSE1Q04693 1361 aaKnown RBP12.13□□□□□ -0.47
SPR28YDR218C BFR2Q06631 534 aaKnown RBP11.85□□□□□ -0.51
SPR28YDR218C RPL17AP05740 184 aaKnown RBP11.77□□□□□ -0.53
SPR28YDR218C RPL17BP46990 184 aaKnown RBP11.77□□□□□ -0.53
SPR28YDR218C MRPL32P25348 183 aa11.73□□□□□ -0.53
SPR28YDR218C REB1P21538 810 aa11.68□□□□□ -0.54
SPR28YDR218C SPT21P35209 758 aa11.33□□□□□ -0.6
SPR28YDR218C CDC27P38042 758 aa11.26□□□□□ -0.61
SPR28YDR218C YGL015CP33199 130 aa11.25□□□□□ -0.61
SPR28YDR218C YKR023WP36119 530 aaKnown RBP11.21□□□□□ -0.61
SPR28YDR218C HOP09932 586 aa10.96□□□□□ -0.65
SPR28YDR218C TFC8Q12308 588 aa10.95□□□□□ -0.66
SPR28YDR218C DCD1P06773 312 aa10.94□□□□□ -0.66
SPR28YDR218C RIM101P33400 625 aa10.88□□□□□ -0.67
SPR28YDR218C MAP2P38174 421 aaKnown RBP10.88□□□□□ -0.67
SPR28YDR218C UBP10P53874 792 aaPredicted RBP10.86□□□□□ -0.67
SPR28YDR218C SCY1P53009 804 aa10.64□□□□□ -0.71
SPR28YDR218C BCH2P36122 765 aa10.59□□□□□ -0.71
SPR28YDR218C OXP1P28273 1286 aa10.55□□□□□ -0.72
SPR28YDR218C SLX5P32828 619 aaKnown RBP10.46□□□□□ -0.73
SPR28YDR218C TFA1P36100 482 aa10.39□□□□□ -0.75
SPR28YDR218C BUD31P25337 157 aaPredicted RBP10.38□□□□□ -0.75
SPR28YDR218C TIF4632P39936 914 aaKnown RBP10.36□□□□□ -0.75
SPR28YDR218C TGL3P40308 642 aa10.34□□□□□ -0.75
SPR28YDR218C EPS1P40557 701 aa10.32□□□□□ -0.76
SPR28YDR218C PTP3P40048 928 aa10.31□□□□□ -0.76
SPR28YDR218C BDF1P35817 686 aa10.28□□□□□ -0.76
SPR28YDR218C YIL055CP40523 627 aaKnown RBP10.26□□□□□ -0.77
SPR28YDR218C YAH1Q12184 172 aaKnown RBP10.18□□□□□ -0.78
SPR28YDR218C RSM7P47150 247 aa10.17□□□□□ -0.78
SPR28YDR218C AI2P03876 854 aa10.1□□□□□ -0.79
SPR28YDR218C BBC1P47068 1157 aa10.04□□□□□ -0.8
SPR28YDR218C YLR271WQ06152 274 aa10.04□□□□□ -0.8
SPR28YDR218C UBP9P39967 754 aa9.98□□□□□ -0.81
SPR28YDR218C MST1P07236 462 aa9.95□□□□□ -0.82
SPR28YDR218C NSR1P27476 414 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SPR28YDR218C PSD2P53037 1138 aaKnown RBP9.91□□□□□ -0.82
SPR28YDR218C YOR238WQ08634 303 aa9.87□□□□□ -0.83
SPR28YDR218C SSP1P38871 571 aa9.85□□□□□ -0.83
SPR28YDR218C SIS1P25294 352 aaKnown RBP9.83□□□□□ -0.84
SPR28YDR218C YAP5P40574 245 aa9.81□□□□□ -0.84
SPR28YDR218C YBL029C-AQ3E756 94 aa9.81□□□□□ -0.84
SPR28YDR218C MRM1P25270 412 aa9.74□□□□□ -0.85
SPR28YDR218C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
SPR28YDR218C CST9Q06032 482 aa9.71□□□□□ -0.86
SPR28YDR218C VNX1P42839 908 aa9.69□□□□□ -0.86
SPR28YDR218C PIB1Q06651 286 aa9.64□□□□□ -0.87
SPR28YDR218C WSC3Q12215 556 aa9.64□□□□□ -0.87
SPR28YDR218C MGA2P40578 1113 aa9.61□□□□□ -0.87
SPR28YDR218C GTT3P39996 337 aa9.56□□□□□ -0.88
SPR28YDR218C SPP1Q03012 353 aa9.56□□□□□ -0.88
SPR28YDR218C VPS29P38759 282 aa9.55□□□□□ -0.88
SPR28YDR218C RCR1P38212 213 aa9.51□□□□□ -0.89
SPR28YDR218C RTG3P38165 486 aa9.49□□□□□ -0.89
SPR28YDR218C TIF11P38912 153 aaKnown RBP9.49□□□□□ -0.89
SPR28YDR218C YMR1P47147 688 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
SPR28YDR218C STS1P38637 319 aa9.47□□□□□ -0.89
SPR28YDR218C DBP1P24784 617 aaKnown RBP9.46□□□□□ -0.9
SPR28YDR218C YFR006WP43590 535 aa9.46□□□□□ -0.9
SPR28YDR218C FKH1P40466 484 aa9.41□□□□□ -0.9
SPR28YDR218C IOC2Q12072 812 aa9.39□□□□□ -0.91
SPR28YDR218C AIR2Q12476 344 aaKnown RBP9.39□□□□□ -0.91
SPR28YDR218C ULI1P43604 169 aa9.38□□□□□ -0.91
SPR28YDR218C VMA1P17255 1071 aaKnown RBP9.37□□□□□ -0.91
SPR28YDR218C YOL036WQ08206 761 aa9.37□□□□□ -0.91
SPR28YDR218C LDB19Q12502 818 aa9.36□□□□□ -0.91
SPR28YDR218C MSB4Q12317 492 aa9.35□□□□□ -0.91
SPR28YDR218C SET4P42948 560 aa9.34□□□□□ -0.91
SPR28YDR218C SAM3Q08986 587 aa9.3□□□□□ -0.92
SPR28YDR218C TRP5P00931 707 aaKnown RBP9.27□□□□□ -0.93
SPR28YDR218C EAP1P36041 632 aaKnown RBP9.25□□□□□ -0.93
SPR28YDR218C RTG1P32607 177 aa9.19□□□□□ -0.94
SPR28YDR218C YJL171CP46992 396 aa9.19□□□□□ -0.94
SPR28YDR218C RAM2P29703 316 aa9.18□□□□□ -0.94
SPR28YDR218C GYP5Q12344 894 aa9.14□□□□□ -0.95
SPR28YDR218C YNL035CP53962 389 aaKnown RBP9.13□□□□□ -0.95
SPR28YDR218C BMT6Q12291 365 aa9.13□□□□□ -0.95
SPR28YDR218C MAK11P20484 414 aaKnown RBP9.1□□□□□ -0.95
SPR28YDR218C SEC61P32915 480 aa9.09□□□□□ -0.95
SPR28YDR218C DAN4P47179 1161 aa9.09□□□□□ -0.95
SPR28YDR218C NCR1Q12200 1170 aa9.09□□□□□ -0.95
SPR28YDR218C DCW1P36091 449 aa9.08□□□□□ -0.96
SPR28YDR218C EDS1P38073 919 aa9.08□□□□□ -0.96
SPR28YDR218C ABP1P15891 592 aaKnown RBP9.07□□□□□ -0.96
SPR28YDR218C HTA1P04911 132 aaKnown RBP9.05□□□□□ -0.96
SPR28YDR218C HTA2P04912 132 aa9.05□□□□□ -0.96
SPR28YDR218C MIF2P35201 549 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms