RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	MTC1	P47018	478 aa	Known RBP	8.16	□□□□□ -1.1
GCD6	YDR211W	DRS1	P32892	752 aa	Known RBP	7.7	□□□□□ -1.18
GCD6	YDR211W	FAP1	P53971	965 aa		7.7	□□□□□ -1.18
GCD6	YDR211W	PRY3	P47033	881 aa		7.26	□□□□□ -1.25
GCD6	YDR211W	PRI1	P10363	409 aa		7.09	□□□□□ -1.28
GCD6	YDR211W	AAD16	Q02895	342 aa		7.09	□□□□□ -1.28
GCD6	YDR211W	YCK3	P39962	524 aa		6.88	□□□□□ -1.31
GCD6	YDR211W	ISW2	Q08773	1120 aa		6.84	□□□□□ -1.31
GCD6	YDR211W	HAA1	Q12753	694 aa	Known RBP	6.84	□□□□□ -1.31
GCD6	YDR211W	RPG1	P38249	964 aa	Known RBP	6.76	□□□□□ -1.33
GCD6	YDR211W	TSR3	Q12094	313 aa	Known RBP	6.65	□□□□□ -1.35
GCD6	YDR211W	DIP2	Q12220	943 aa	Predicted RBP	6.61	□□□□□ -1.35
GCD6	YDR211W	BFR2	Q06631	534 aa	Known RBP	6.59	□□□□□ -1.35
GCD6	YDR211W	AVT3	P36062	692 aa		6.47	□□□□□ -1.37
GCD6	YDR211W	MRPL32	P25348	183 aa		6.41	□□□□□ -1.38
GCD6	YDR211W	RSE1	Q04693	1361 aa	Known RBP	6.38	□□□□□ -1.39
GCD6	YDR211W	YGL015C	P33199	130 aa		6.26	□□□□□ -1.41
GCD6	YDR211W	REB1	P21538	810 aa		6.19	□□□□□ -1.42
GCD6	YDR211W	RPL17A	P05740	184 aa	Known RBP	6.18	□□□□□ -1.42
GCD6	YDR211W	RPL17B	P46990	184 aa	Known RBP	6.18	□□□□□ -1.42
GCD6	YDR211W	TFA1	P36100	482 aa		6.09	□□□□□ -1.43
GCD6	YDR211W	CDC27	P38042	758 aa		6.01	□□□□□ -1.45
GCD6	YDR211W	UBP10	P53874	792 aa	Predicted RBP	5.93	□□□□□ -1.46
GCD6	YDR211W	YKR023W	P36119	530 aa	Known RBP	5.92	□□□□□ -1.46
GCD6	YDR211W	SPT21	P35209	758 aa		5.92	□□□□□ -1.46
GCD6	YDR211W	BUD31	P25337	157 aa	Predicted RBP	5.91	□□□□□ -1.46
GCD6	YDR211W	MAP2	P38174	421 aa	Known RBP	5.87	□□□□□ -1.47
GCD6	YDR211W	TFC8	Q12308	588 aa		5.81	□□□□□ -1.48
GCD6	YDR211W	HO	P09932	586 aa		5.78	□□□□□ -1.48
GCD6	YDR211W	DCD1	P06773	312 aa		5.74	□□□□□ -1.49
GCD6	YDR211W	RIM101	P33400	625 aa		5.69	□□□□□ -1.5
GCD6	YDR211W	SCY1	P53009	804 aa		5.68	□□□□□ -1.5
GCD6	YDR211W	TIF4632	P39936	914 aa	Known RBP	5.68	□□□□□ -1.5
GCD6	YDR211W	TGL3	P40308	642 aa		5.67	□□□□□ -1.5
GCD6	YDR211W	SLX5	P32828	619 aa	Known RBP	5.65	□□□□□ -1.51
GCD6	YDR211W	UBP9	P39967	754 aa		5.6	□□□□□ -1.51
GCD6	YDR211W	BCH2	P36122	765 aa		5.59	□□□□□ -1.51
GCD6	YDR211W	SIS1	P25294	352 aa	Known RBP	5.57	□□□□□ -1.52
GCD6	YDR211W	OXP1	P28273	1286 aa		5.54	□□□□□ -1.52
GCD6	YDR211W	PTP3	P40048	928 aa		5.44	□□□□□ -1.54
GCD6	YDR211W	YIL055C	P40523	627 aa	Known RBP	5.44	□□□□□ -1.54
GCD6	YDR211W	YAH1	Q12184	172 aa	Known RBP	5.44	□□□□□ -1.54
GCD6	YDR211W	EPS1	P40557	701 aa		5.43	□□□□□ -1.54
GCD6	YDR211W	BDF1	P35817	686 aa		5.42	□□□□□ -1.54
GCD6	YDR211W	MST1	P07236	462 aa		5.41	□□□□□ -1.54
GCD6	YDR211W	SSP1	P38871	571 aa		5.37	□□□□□ -1.55
GCD6	YDR211W	YLR271W	Q06152	274 aa		5.36	□□□□□ -1.55
GCD6	YDR211W	RSM7	P47150	247 aa		5.35	□□□□□ -1.55
GCD6	YDR211W	YOR238W	Q08634	303 aa		5.35	□□□□□ -1.55
GCD6	YDR211W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.55	not detected
GCD6	YDR211W	YBL029C-A	Q3E756	94 aa		5.32	□□□□□ -1.56
GCD6	YDR211W	VNX1	P42839	908 aa		5.28	□□□□□ -1.56
GCD6	YDR211W	AI2	P03876	854 aa		5.27	□□□□□ -1.57
GCD6	YDR211W	BBC1	P47068	1157 aa		5.27	□□□□□ -1.57
GCD6	YDR211W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
GCD6	YDR211W	YAP5	P40574	245 aa		5.26	□□□□□ -1.57
GCD6	YDR211W	SPP1	Q03012	353 aa		5.22	□□□□□ -1.57
GCD6	YDR211W	PSD2	P53037	1138 aa	Known RBP	5.21	□□□□□ -1.57
GCD6	YDR211W	CST9	Q06032	482 aa		5.2	□□□□□ -1.58
GCD6	YDR211W	MGA2	P40578	1113 aa		5.19	□□□□□ -1.58
GCD6	YDR211W	WSC3	Q12215	556 aa		5.18	□□□□□ -1.58
GCD6	YDR211W	TIF11	P38912	153 aa	Known RBP	5.17	□□□□□ -1.58
GCD6	YDR211W	AIR2	Q12476	344 aa	Known RBP	5.16	□□□□□ -1.58
GCD6	YDR211W	FKH1	P40466	484 aa		5.15	□□□□□ -1.59
GCD6	YDR211W	GTT3	P39996	337 aa		5.14	□□□□□ -1.59
GCD6	YDR211W	MRM1	P25270	412 aa		5.12	□□□□□ -1.59
GCD6	YDR211W	YJL171C	P46992	396 aa		5.11	□□□□□ -1.59
GCD6	YDR211W	IOC2	Q12072	812 aa		5.07	□□□□□ -1.6
GCD6	YDR211W	LDB19	Q12502	818 aa		5.07	□□□□□ -1.6
GCD6	YDR211W	ULI1	P43604	169 aa		5.06	□□□□□ -1.6
GCD6	YDR211W	RCR1	P38212	213 aa		5.04	□□□□□ -1.6
GCD6	YDR211W	MSB4	Q12317	492 aa		5.04	□□□□□ -1.6
GCD6	YDR211W	PIB1	Q06651	286 aa		5.03	□□□□□ -1.6
GCD6	YDR211W	BMT6	Q12291	365 aa		5.03	□□□□□ -1.6
GCD6	YDR211W	EAP1	P36041	632 aa	Known RBP	5.02	□□□□□ -1.61
GCD6	YDR211W	RTG3	P38165	486 aa		5.02	□□□□□ -1.61
GCD6	YDR211W	VPS29	P38759	282 aa		4.99	□□□□□ -1.61
GCD6	YDR211W	DMA1	P38823	416 aa		4.99	□□□□□ -1.61
GCD6	YDR211W	RAM2	P29703	316 aa		4.97	□□□□□ -1.61
GCD6	YDR211W	YOL036W	Q08206	761 aa		4.97	□□□□□ -1.61
GCD6	YDR211W	RTG1	P32607	177 aa		4.96	□□□□□ -1.62
GCD6	YDR211W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
GCD6	YDR211W	SGS1	P35187	1447 aa		4.94	□□□□□ -1.62
GCD6	YDR211W	TRP5	P00931	707 aa	Known RBP	4.94	□□□□□ -1.62
GCD6	YDR211W	SET4	P42948	560 aa		4.94	□□□□□ -1.62
GCD6	YDR211W	NCR1	Q12200	1170 aa		4.94	□□□□□ -1.62
GCD6	YDR211W	STS1	P38637	319 aa		4.93	□□□□□ -1.62
GCD6	YDR211W	YFR006W	P43590	535 aa		4.93	□□□□□ -1.62
GCD6	YDR211W	RQC2	Q12532	1038 aa	Known RBP	4.93	□□□□□ -1.62
GCD6	YDR211W	DBP1	P24784	617 aa	Known RBP	4.93	□□□□□ -1.62
GCD6	YDR211W	SEC61	P32915	480 aa		4.93	□□□□□ -1.62
GCD6	YDR211W	YNL035C	P53962	389 aa	Known RBP	4.92	□□□□□ -1.62
GCD6	YDR211W	SAM3	Q08986	587 aa		4.92	□□□□□ -1.62
GCD6	YDR211W	VMA1	P17255	1071 aa	Known RBP	4.91	□□□□□ -1.62
GCD6	YDR211W	MAK11	P20484	414 aa	Known RBP	4.88	□□□□□ -1.63
GCD6	YDR211W	ABP1	P15891	592 aa	Known RBP	4.84	□□□□□ -1.63
GCD6	YDR211W	TFG1	P41895	735 aa	Predicted RBP	4.84	□□□□□ -1.63
GCD6	YDR211W	DAN4	P47179	1161 aa		4.84	□□□□□ -1.63
GCD6	YDR211W	JIP4	Q03361	876 aa		4.84	□□□□□ -1.63
GCD6	YDR211W	COQ8	P27697	501 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms