RNA–Protein interactions for RNA: YDR198C

RKM2, Transcript of Ribosomal protein lysine methyltransferase, yeastyeast

Gene RKM2, Length 1,440 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM2YDR198C FAP1P53971 965 aa15.09■□□□□ 0.01
RKM2YDR198C MTC1P47018 478 aaKnown RBP14.79□□□□□ -0.04
RKM2YDR198C PRY3P47033 881 aa14.25□□□□□ -0.13
RKM2YDR198C DRS1P32892 752 aaKnown RBP13.43□□□□□ -0.26
RKM2YDR198C YCK3P39962 524 aa13.41□□□□□ -0.26
RKM2YDR198C AAD16Q02895 342 aa13.4□□□□□ -0.26
RKM2YDR198C PRI1P10363 409 aa13.27□□□□□ -0.29
RKM2YDR198C HAA1Q12753 694 aaKnown RBP13.23□□□□□ -0.29
RKM2YDR198C TSR3Q12094 313 aaKnown RBP12.48□□□□□ -0.41
RKM2YDR198C ISW2Q08773 1120 aa12.47□□□□□ -0.41
RKM2YDR198C RPG1P38249 964 aaKnown RBP12.43□□□□□ -0.42
RKM2YDR198C MRPL32P25348 183 aa11.97□□□□□ -0.49
RKM2YDR198C YGL015CP33199 130 aa11.94□□□□□ -0.5
RKM2YDR198C DIP2Q12220 943 aaPredicted RBP11.9□□□□□ -0.5
RKM2YDR198C BUD31P25337 157 aaPredicted RBP11.69□□□□□ -0.54
RKM2YDR198C RSE1Q04693 1361 aaKnown RBP11.62□□□□□ -0.55
RKM2YDR198C RPL17AP05740 184 aaKnown RBP11.32□□□□□ -0.6
RKM2YDR198C AVT3P36062 692 aa11.32□□□□□ -0.6
RKM2YDR198C RPL17BP46990 184 aaKnown RBP11.32□□□□□ -0.6
RKM2YDR198C REB1P21538 810 aa11.31□□□□□ -0.6
RKM2YDR198C CDC27P38042 758 aa11.09□□□□□ -0.63
RKM2YDR198C SIS1P25294 352 aaKnown RBP10.99□□□□□ -0.65
RKM2YDR198C BFR2Q06631 534 aaKnown RBP10.96□□□□□ -0.65
RKM2YDR198C UBP10P53874 792 aaPredicted RBP10.95□□□□□ -0.66
RKM2YDR198C MAP2P38174 421 aaKnown RBP10.94□□□□□ -0.66
RKM2YDR198C SPT21P35209 758 aa10.75□□□□□ -0.69
RKM2YDR198C YKR023WP36119 530 aaKnown RBP10.74□□□□□ -0.69
RKM2YDR198C UBP9P39967 754 aa10.69□□□□□ -0.7
RKM2YDR198C HOP09932 586 aa10.57□□□□□ -0.72
RKM2YDR198C DCD1P06773 312 aa10.56□□□□□ -0.72
RKM2YDR198C TIF4632P39936 914 aaKnown RBP10.52□□□□□ -0.73
RKM2YDR198C TFC8Q12308 588 aa10.51□□□□□ -0.73
RKM2YDR198C TGL3P40308 642 aa10.5□□□□□ -0.73
RKM2YDR198C SCY1P53009 804 aa10.42□□□□□ -0.74
RKM2YDR198C SLX5P32828 619 aaKnown RBP10.37□□□□□ -0.75
RKM2YDR198C RIM101P33400 625 aa10.25□□□□□ -0.77
RKM2YDR198C BCH2P36122 765 aa10.16□□□□□ -0.78
RKM2YDR198C YBL029C-AQ3E756 94 aa10.01□□□□□ -0.81
RKM2YDR198C OXP1P28273 1286 aa9.93□□□□□ -0.82
RKM2YDR198C EPS1P40557 701 aa9.9□□□□□ -0.83
RKM2YDR198C MST1P07236 462 aa9.86□□□□□ -0.83
RKM2YDR198C BDF1P35817 686 aa9.85□□□□□ -0.83
RKM2YDR198C PTP3P40048 928 aa9.84□□□□□ -0.83
RKM2YDR198C VNX1P42839 908 aa9.81□□□□□ -0.84
RKM2YDR198C YIL055CP40523 627 aaKnown RBP9.8□□□□□ -0.84
RKM2YDR198C YOR238WQ08634 303 aa9.75□□□□□ -0.85
RKM2YDR198C SPP1Q03012 353 aa9.71□□□□□ -0.86
RKM2YDR198C YJL171CP46992 396 aa9.7□□□□□ -0.86
RKM2YDR198C AIR2Q12476 344 aaKnown RBP9.7□□□□□ -0.86
RKM2YDR198C YAH1Q12184 172 aaKnown RBP9.65□□□□□ -0.87
RKM2YDR198C RSM7P47150 247 aa9.64□□□□□ -0.87
RKM2YDR198C BBC1P47068 1157 aa9.63□□□□□ -0.87
RKM2YDR198C FKH1P40466 484 aa9.61□□□□□ -0.87
RKM2YDR198C WSC3Q12215 556 aa9.61□□□□□ -0.87
RKM2YDR198C AI2P03876 854 aa9.6□□□□□ -0.87
RKM2YDR198C NSR1P27476 414 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
RKM2YDR198C TIF11P38912 153 aaKnown RBP9.48□□□□□ -0.89
RKM2YDR198C YAP5P40574 245 aa9.48□□□□□ -0.89
RKM2YDR198C BMT6Q12291 365 aa9.41□□□□□ -0.9
RKM2YDR198C YLR271WQ06152 274 aa9.4□□□□□ -0.9
RKM2YDR198C LDB19Q12502 818 aa9.38□□□□□ -0.91
RKM2YDR198C TFA1P36100 482 aa9.36□□□□□ -0.91
RKM2YDR198C GTT3P39996 337 aa9.33□□□□□ -0.92
RKM2YDR198C PSD2P53037 1138 aaKnown RBP9.3□□□□□ -0.92
RKM2YDR198C PIB1Q06651 286 aa9.3□□□□□ -0.92
RKM2YDR198C ULI1P43604 169 aa9.29□□□□□ -0.92
RKM2YDR198C IOC2Q12072 812 aa9.27□□□□□ -0.93
RKM2YDR198C MRM1P25270 412 aa9.25□□□□□ -0.93
RKM2YDR198C SSP1P38871 571 aa9.16□□□□□ -0.94
RKM2YDR198C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
RKM2YDR198C CST9Q06032 482 aa9.07□□□□□ -0.96
RKM2YDR198C RTG1P32607 177 aa9.05□□□□□ -0.96
RKM2YDR198C SET4P42948 560 aa9.03□□□□□ -0.96
RKM2YDR198C YFR006WP43590 535 aa9.02□□□□□ -0.97
RKM2YDR198C YMR1P47147 688 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
RKM2YDR198C NCR1Q12200 1170 aa9.02□□□□□ -0.97
RKM2YDR198C MSB4Q12317 492 aa9.02□□□□□ -0.97
RKM2YDR198C DBP1P24784 617 aaKnown RBP9.01□□□□□ -0.97
RKM2YDR198C YOL036WQ08206 761 aa9.01□□□□□ -0.97
RKM2YDR198C VPS29P38759 282 aa9□□□□□ -0.97
RKM2YDR198C EAP1P36041 632 aaKnown RBP8.98□□□□□ -0.97
RKM2YDR198C RTG3P38165 486 aa8.98□□□□□ -0.97
RKM2YDR198C MGA2P40578 1113 aa8.98□□□□□ -0.97
RKM2YDR198C STS1P38637 319 aa8.96□□□□□ -0.98
RKM2YDR198C TRP5P00931 707 aaKnown RBP8.95□□□□□ -0.98
RKM2YDR198C VMA1P17255 1071 aaKnown RBP8.93□□□□□ -0.98
RKM2YDR198C BCK2P33306 851 aa8.91□□□□□ -0.98
RKM2YDR198C RCR1P38212 213 aa8.91□□□□□ -0.98
RKM2YDR198C SEC61P32915 480 aa8.88□□□□□ -0.99
RKM2YDR198C YNL035CP53962 389 aaKnown RBP8.88□□□□□ -0.99
RKM2YDR198C SAM3Q08986 587 aa8.84□□□□□ -0.99
RKM2YDR198C RGA2Q06407 1009 aa8.82□□□□□ -1
RKM2YDR198C SAP30P38429 201 aa8.78□□□□□ -1
RKM2YDR198C TFG1P41895 735 aaPredicted RBP8.76□□□□□ -1.01
RKM2YDR198C CHL1P22516 861 aaPredicted RBP8.74□□□□□ -1.01
RKM2YDR198C GYP5Q12344 894 aa8.74□□□□□ -1.01
RKM2YDR198C DCW1P36091 449 aa8.71□□□□□ -1.01
RKM2YDR198C DAN4P47179 1161 aa8.7□□□□□ -1.02
RKM2YDR198C HTA1P04911 132 aaKnown RBP8.69□□□□□ -1.02
RKM2YDR198C HTA2P04912 132 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms