RNA–Protein interactions for RNA: YDR162C

NBP2, Transcript of Protein involved in the HOG (high osmolarity glycerol) pathway, yeastyeast

Gene NBP2, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NBP2YDR162C MTC1P47018 478 aaKnown RBP17.38■□□□□ 0.37
NBP2YDR162C FAP1P53971 965 aa15.95■□□□□ 0.14
NBP2YDR162C DRS1P32892 752 aaKnown RBP15.77■□□□□ 0.12
NBP2YDR162C PRY3P47033 881 aa15.02■□□□□ -0
NBP2YDR162C PRI1P10363 409 aa14.88□□□□□ -0.03
NBP2YDR162C AAD16Q02895 342 aa14.84□□□□□ -0.03
NBP2YDR162C ISW2Q08773 1120 aa14.49□□□□□ -0.09
NBP2YDR162C RPG1P38249 964 aaKnown RBP14.31□□□□□ -0.12
NBP2YDR162C YCK3P39962 524 aa14.24□□□□□ -0.13
NBP2YDR162C HAA1Q12753 694 aaKnown RBP14.2□□□□□ -0.14
NBP2YDR162C DIP2Q12220 943 aaPredicted RBP14.01□□□□□ -0.17
NBP2YDR162C TSR3Q12094 313 aaKnown RBP13.97□□□□□ -0.17
NBP2YDR162C RSE1Q04693 1361 aaKnown RBP13.67□□□□□ -0.22
NBP2YDR162C MRPL32P25348 183 aa13.48□□□□□ -0.25
NBP2YDR162C AVT3P36062 692 aa13.44□□□□□ -0.26
NBP2YDR162C RPL17AP05740 184 aaKnown RBP13.21□□□□□ -0.29
NBP2YDR162C RPL17BP46990 184 aaKnown RBP13.21□□□□□ -0.29
NBP2YDR162C REB1P21538 810 aa13.18□□□□□ -0.3
NBP2YDR162C YGL015CP33199 130 aa13.09□□□□□ -0.31
NBP2YDR162C BFR2Q06631 534 aaKnown RBP12.93□□□□□ -0.34
NBP2YDR162C CDC27P38042 758 aa12.72□□□□□ -0.37
NBP2YDR162C SPT21P35209 758 aa12.69□□□□□ -0.38
NBP2YDR162C YKR023WP36119 530 aaKnown RBP12.62□□□□□ -0.39
NBP2YDR162C UBP10P53874 792 aaPredicted RBP12.49□□□□□ -0.41
NBP2YDR162C TFC8Q12308 588 aa12.37□□□□□ -0.43
NBP2YDR162C MAP2P38174 421 aaKnown RBP12.35□□□□□ -0.43
NBP2YDR162C HOP09932 586 aa12.28□□□□□ -0.44
NBP2YDR162C DCD1P06773 312 aa12.19□□□□□ -0.46
NBP2YDR162C RIM101P33400 625 aa12.19□□□□□ -0.46
NBP2YDR162C BUD31P25337 157 aaPredicted RBP12.16□□□□□ -0.46
NBP2YDR162C SCY1P53009 804 aa12.02□□□□□ -0.49
NBP2YDR162C TIF4632P39936 914 aaKnown RBP11.96□□□□□ -0.49
NBP2YDR162C TGL3P40308 642 aa11.96□□□□□ -0.49
NBP2YDR162C SLX5P32828 619 aaKnown RBP11.94□□□□□ -0.5
NBP2YDR162C BCH2P36122 765 aa11.93□□□□□ -0.5
NBP2YDR162C OXP1P28273 1286 aa11.72□□□□□ -0.53
NBP2YDR162C UBP9P39967 754 aa11.68□□□□□ -0.54
NBP2YDR162C EPS1P40557 701 aa11.59□□□□□ -0.55
NBP2YDR162C BDF1P35817 686 aa11.57□□□□□ -0.56
NBP2YDR162C YIL055CP40523 627 aaKnown RBP11.53□□□□□ -0.56
NBP2YDR162C PTP3P40048 928 aa11.49□□□□□ -0.57
NBP2YDR162C SIS1P25294 352 aaKnown RBP11.48□□□□□ -0.57
NBP2YDR162C MST1P07236 462 aa11.45□□□□□ -0.58
NBP2YDR162C RSM7P47150 247 aa11.4□□□□□ -0.58
NBP2YDR162C NSR1P27476 414 aaKnown RBP RIP-Chip data11.38□□□□□ -0.59 RIP-Chip
NBP2YDR162C BBC1P47068 1157 aa11.35□□□□□ -0.59
NBP2YDR162C TFA1P36100 482 aa11.34□□□□□ -0.59
NBP2YDR162C YOR238WQ08634 303 aa11.33□□□□□ -0.6
NBP2YDR162C AI2P03876 854 aa11.3□□□□□ -0.6
NBP2YDR162C YAH1Q12184 172 aaKnown RBP11.21□□□□□ -0.61
NBP2YDR162C YAP5P40574 245 aa11.19□□□□□ -0.62
NBP2YDR162C YBL029C-AQ3E756 94 aa11.17□□□□□ -0.62
NBP2YDR162C VNX1P42839 908 aa11.12□□□□□ -0.63
NBP2YDR162C YLR271WQ06152 274 aa11.12□□□□□ -0.63
NBP2YDR162C PSD2P53037 1138 aaKnown RBP11.04□□□□□ -0.64
NBP2YDR162C SPP1Q03012 353 aa10.98□□□□□ -0.65
NBP2YDR162C WSC3Q12215 556 aa10.92□□□□□ -0.66
NBP2YDR162C TIF11P38912 153 aaKnown RBP10.9□□□□□ -0.66
NBP2YDR162C GTT3P39996 337 aa10.89□□□□□ -0.67
NBP2YDR162C SSP1P38871 571 aa10.88□□□□□ -0.67
NBP2YDR162C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.87□□□□□ -0.67not detected
NBP2YDR162C MRM1P25270 412 aa10.84□□□□□ -0.67
NBP2YDR162C AIR2Q12476 344 aaKnown RBP10.82□□□□□ -0.68
NBP2YDR162C FKH1P40466 484 aa10.8□□□□□ -0.68
NBP2YDR162C IOC2Q12072 812 aa10.74□□□□□ -0.69
NBP2YDR162C ULI1P43604 169 aa10.73□□□□□ -0.69
NBP2YDR162C MSB4Q12317 492 aa10.73□□□□□ -0.69
NBP2YDR162C PIB1Q06651 286 aa10.72□□□□□ -0.69
NBP2YDR162C MGA2P40578 1113 aa10.71□□□□□ -0.69
NBP2YDR162C YJL171CP46992 396 aa10.7□□□□□ -0.7
NBP2YDR162C VPS29P38759 282 aa10.68□□□□□ -0.7
NBP2YDR162C YMR1P47147 688 aaKnown RBP RIP-Chip data10.68□□□□□ -0.7not detected
NBP2YDR162C LDB19Q12502 818 aa10.68□□□□□ -0.7
NBP2YDR162C EAP1P36041 632 aaKnown RBP10.67□□□□□ -0.7
NBP2YDR162C CST9Q06032 482 aa10.66□□□□□ -0.7
NBP2YDR162C RTG3P38165 486 aa10.65□□□□□ -0.7
NBP2YDR162C DBP1P24784 617 aaKnown RBP10.61□□□□□ -0.71
NBP2YDR162C YOL036WQ08206 761 aa10.59□□□□□ -0.71
NBP2YDR162C SAM3Q08986 587 aa10.57□□□□□ -0.72
NBP2YDR162C BMT6Q12291 365 aa10.56□□□□□ -0.72
NBP2YDR162C VMA1P17255 1071 aaKnown RBP10.54□□□□□ -0.72
NBP2YDR162C STS1P38637 319 aa10.54□□□□□ -0.72
NBP2YDR162C SET4P42948 560 aa10.54□□□□□ -0.72
NBP2YDR162C TRP5P00931 707 aaKnown RBP10.53□□□□□ -0.72
NBP2YDR162C YFR006WP43590 535 aa10.5□□□□□ -0.73
NBP2YDR162C RTG1P32607 177 aa10.49□□□□□ -0.73
NBP2YDR162C YNL035CP53962 389 aaKnown RBP10.47□□□□□ -0.73
NBP2YDR162C SEC61P32915 480 aa10.46□□□□□ -0.73
NBP2YDR162C NCR1Q12200 1170 aa10.46□□□□□ -0.73
NBP2YDR162C RCR1P38212 213 aa10.43□□□□□ -0.74
NBP2YDR162C ABP1P15891 592 aaKnown RBP10.41□□□□□ -0.74
NBP2YDR162C JIP4Q03361 876 aa10.36□□□□□ -0.75
NBP2YDR162C DAN4P47179 1161 aa10.34□□□□□ -0.75
NBP2YDR162C GYP5Q12344 894 aa10.33□□□□□ -0.76
NBP2YDR162C TFG1P41895 735 aaPredicted RBP10.3□□□□□ -0.76
NBP2YDR162C HTA1P04911 132 aaKnown RBP10.26□□□□□ -0.77
NBP2YDR162C HTA2P04912 132 aa10.26□□□□□ -0.77
NBP2YDR162C PTC4P38089 393 aa10.24□□□□□ -0.77
NBP2YDR162C YDL129WQ07555 291 aa10.22□□□□□ -0.77
NBP2YDR162C DCW1P36091 449 aa10.21□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms