RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeastyeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDS1YDR113C MTC1P47018 478 aaKnown RBP15.71■□□□□ 0.11
PDS1YDR113C FAP1P53971 965 aa14.41□□□□□ -0.1
PDS1YDR113C DRS1P32892 752 aaKnown RBP14.36□□□□□ -0.11
PDS1YDR113C PRY3P47033 881 aa13.55□□□□□ -0.24
PDS1YDR113C PRI1P10363 409 aa13.41□□□□□ -0.26
PDS1YDR113C AAD16Q02895 342 aa13.37□□□□□ -0.27
PDS1YDR113C ISW2Q08773 1120 aa13.09□□□□□ -0.31
PDS1YDR113C RPG1P38249 964 aaKnown RBP12.94□□□□□ -0.34
PDS1YDR113C YCK3P39962 524 aa12.79□□□□□ -0.36
PDS1YDR113C HAA1Q12753 694 aaKnown RBP12.77□□□□□ -0.37
PDS1YDR113C DIP2Q12220 943 aaPredicted RBP12.71□□□□□ -0.37
PDS1YDR113C TSR3Q12094 313 aaKnown RBP12.62□□□□□ -0.39
PDS1YDR113C RSE1Q04693 1361 aaKnown RBP12.38□□□□□ -0.43
PDS1YDR113C AVT3P36062 692 aa12.18□□□□□ -0.46
PDS1YDR113C MRPL32P25348 183 aa12.17□□□□□ -0.46
PDS1YDR113C RPL17AP05740 184 aaKnown RBP11.98□□□□□ -0.49
PDS1YDR113C RPL17BP46990 184 aaKnown RBP11.98□□□□□ -0.49
PDS1YDR113C REB1P21538 810 aa11.96□□□□□ -0.49
PDS1YDR113C BFR2Q06631 534 aaKnown RBP11.8□□□□□ -0.52
PDS1YDR113C YGL015CP33199 130 aa11.78□□□□□ -0.52
PDS1YDR113C CDC27P38042 758 aa11.48□□□□□ -0.57
PDS1YDR113C SPT21P35209 758 aa11.45□□□□□ -0.58
PDS1YDR113C YKR023WP36119 530 aaKnown RBP11.4□□□□□ -0.58
PDS1YDR113C UBP10P53874 792 aaPredicted RBP11.24□□□□□ -0.61
PDS1YDR113C TFC8Q12308 588 aa11.17□□□□□ -0.62
PDS1YDR113C MAP2P38174 421 aaKnown RBP11.15□□□□□ -0.62
PDS1YDR113C HOP09932 586 aa11.13□□□□□ -0.63
PDS1YDR113C DCD1P06773 312 aa11.06□□□□□ -0.64
PDS1YDR113C RIM101P33400 625 aa11.02□□□□□ -0.65
PDS1YDR113C BUD31P25337 157 aaPredicted RBP10.9□□□□□ -0.66
PDS1YDR113C SCY1P53009 804 aa10.87□□□□□ -0.67
PDS1YDR113C SLX5P32828 619 aaKnown RBP10.79□□□□□ -0.68
PDS1YDR113C BCH2P36122 765 aa10.79□□□□□ -0.68
PDS1YDR113C TIF4632P39936 914 aaKnown RBP10.79□□□□□ -0.68
PDS1YDR113C TGL3P40308 642 aa10.76□□□□□ -0.69
PDS1YDR113C OXP1P28273 1286 aa10.62□□□□□ -0.71
PDS1YDR113C UBP9P39967 754 aa10.51□□□□□ -0.73
PDS1YDR113C EPS1P40557 701 aa10.49□□□□□ -0.73
PDS1YDR113C YIL055CP40523 627 aaKnown RBP10.48□□□□□ -0.73
PDS1YDR113C BDF1P35817 686 aa10.47□□□□□ -0.73
PDS1YDR113C TFA1P36100 482 aa10.46□□□□□ -0.73
PDS1YDR113C PTP3P40048 928 aa10.45□□□□□ -0.74
PDS1YDR113C SIS1P25294 352 aaKnown RBP10.34□□□□□ -0.75
PDS1YDR113C RSM7P47150 247 aa10.33□□□□□ -0.76
PDS1YDR113C MST1P07236 462 aa10.29□□□□□ -0.76
PDS1YDR113C BBC1P47068 1157 aa10.29□□□□□ -0.76
PDS1YDR113C AI2P03876 854 aa10.24□□□□□ -0.77
PDS1YDR113C YAH1Q12184 172 aaKnown RBP10.23□□□□□ -0.77
PDS1YDR113C NSR1P27476 414 aaKnown RBP RIP-Chip data10.22□□□□□ -0.77not detected
PDS1YDR113C YOR238WQ08634 303 aa10.22□□□□□ -0.77
PDS1YDR113C YAP5P40574 245 aa10.1□□□□□ -0.79
PDS1YDR113C YLR271WQ06152 274 aa10.09□□□□□ -0.79
PDS1YDR113C YBL029C-AQ3E756 94 aa10.08□□□□□ -0.8
PDS1YDR113C VNX1P42839 908 aa10.02□□□□□ -0.81
PDS1YDR113C PSD2P53037 1138 aaKnown RBP9.98□□□□□ -0.81
PDS1YDR113C SSP1P38871 571 aa9.9□□□□□ -0.82
PDS1YDR113C SPP1Q03012 353 aa9.9□□□□□ -0.82
PDS1YDR113C WSC3Q12215 556 aa9.89□□□□□ -0.83
PDS1YDR113C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
PDS1YDR113C GTT3P39996 337 aa9.86□□□□□ -0.83
PDS1YDR113C MRM1P25270 412 aa9.84□□□□□ -0.83
PDS1YDR113C TIF11P38912 153 aaKnown RBP9.82□□□□□ -0.84
PDS1YDR113C PIB1Q06651 286 aa9.75□□□□□ -0.85
PDS1YDR113C AIR2Q12476 344 aaKnown RBP9.72□□□□□ -0.85
PDS1YDR113C MGA2P40578 1113 aa9.71□□□□□ -0.86
PDS1YDR113C FKH1P40466 484 aa9.7□□□□□ -0.86
PDS1YDR113C ULI1P43604 169 aa9.69□□□□□ -0.86
PDS1YDR113C CST9Q06032 482 aa9.69□□□□□ -0.86
PDS1YDR113C YMR1P47147 688 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
PDS1YDR113C IOC2Q12072 812 aa9.67□□□□□ -0.86
PDS1YDR113C MSB4Q12317 492 aa9.67□□□□□ -0.86
PDS1YDR113C RTG3P38165 486 aa9.66□□□□□ -0.86
PDS1YDR113C VPS29P38759 282 aa9.66□□□□□ -0.86
PDS1YDR113C YJL171CP46992 396 aa9.65□□□□□ -0.86
PDS1YDR113C LDB19Q12502 818 aa9.65□□□□□ -0.86
PDS1YDR113C DBP1P24784 617 aaKnown RBP9.62□□□□□ -0.87
PDS1YDR113C EAP1P36041 632 aaKnown RBP9.62□□□□□ -0.87
PDS1YDR113C YOL036WQ08206 761 aa9.57□□□□□ -0.88
PDS1YDR113C YFR006WP43590 535 aa9.55□□□□□ -0.88
PDS1YDR113C STS1P38637 319 aa9.54□□□□□ -0.88
PDS1YDR113C SET4P42948 560 aa9.54□□□□□ -0.88
PDS1YDR113C VMA1P17255 1071 aaKnown RBP9.53□□□□□ -0.88
PDS1YDR113C SAM3Q08986 587 aa9.52□□□□□ -0.89
PDS1YDR113C BMT6Q12291 365 aa9.51□□□□□ -0.89
PDS1YDR113C TRP5P00931 707 aaKnown RBP9.5□□□□□ -0.89
PDS1YDR113C RCR1P38212 213 aa9.48□□□□□ -0.89
PDS1YDR113C RTG1P32607 177 aa9.47□□□□□ -0.89
PDS1YDR113C YNL035CP53962 389 aaKnown RBP9.44□□□□□ -0.9
PDS1YDR113C NCR1Q12200 1170 aa9.44□□□□□ -0.9
PDS1YDR113C SEC61P32915 480 aa9.43□□□□□ -0.9
PDS1YDR113C ABP1P15891 592 aaKnown RBP9.38□□□□□ -0.91
PDS1YDR113C GYP5Q12344 894 aa9.35□□□□□ -0.91
PDS1YDR113C JIP4Q03361 876 aa9.34□□□□□ -0.91
PDS1YDR113C TFG1P41895 735 aaPredicted RBP9.31□□□□□ -0.92
PDS1YDR113C DAN4P47179 1161 aa9.31□□□□□ -0.92
PDS1YDR113C HTA1P04911 132 aaKnown RBP9.29□□□□□ -0.92
PDS1YDR113C HTA2P04912 132 aa9.29□□□□□ -0.92
PDS1YDR113C DCW1P36091 449 aa9.25□□□□□ -0.93
PDS1YDR113C PTC4P38089 393 aa9.25□□□□□ -0.93
PDS1YDR113C YEL023CP39992 682 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms