RNA–Protein interactions for RNA: YDR075W

PPH3, Transcript of Catalytic subunit of protein phosphatase PP4 complex, yeastyeast

Gene PPH3, Length 927 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPH3YDR075W MTC1P47018 478 aaKnown RBP14.89□□□□□ -0.03
PPH3YDR075W FAP1P53971 965 aa13.67□□□□□ -0.22
PPH3YDR075W DRS1P32892 752 aaKnown RBP13.65□□□□□ -0.22
PPH3YDR075W PRY3P47033 881 aa12.85□□□□□ -0.35
PPH3YDR075W PRI1P10363 409 aa12.69□□□□□ -0.38
PPH3YDR075W AAD16Q02895 342 aa12.66□□□□□ -0.38
PPH3YDR075W ISW2Q08773 1120 aa12.41□□□□□ -0.42
PPH3YDR075W RPG1P38249 964 aaKnown RBP12.28□□□□□ -0.44
PPH3YDR075W YCK3P39962 524 aa12.13□□□□□ -0.47
PPH3YDR075W DIP2Q12220 943 aaPredicted RBP12.08□□□□□ -0.48
PPH3YDR075W HAA1Q12753 694 aaKnown RBP12.07□□□□□ -0.48
PPH3YDR075W TSR3Q12094 313 aaKnown RBP11.98□□□□□ -0.49
PPH3YDR075W RSE1Q04693 1361 aaKnown RBP11.75□□□□□ -0.53
PPH3YDR075W AVT3P36062 692 aa11.57□□□□□ -0.56
PPH3YDR075W MRPL32P25348 183 aa11.53□□□□□ -0.56
PPH3YDR075W RPL17AP05740 184 aaKnown RBP11.38□□□□□ -0.59
PPH3YDR075W RPL17BP46990 184 aaKnown RBP11.38□□□□□ -0.59
PPH3YDR075W REB1P21538 810 aa11.35□□□□□ -0.59
PPH3YDR075W BFR2Q06631 534 aaKnown RBP11.23□□□□□ -0.61
PPH3YDR075W YGL015CP33199 130 aa11.14□□□□□ -0.63
PPH3YDR075W CDC27P38042 758 aa10.89□□□□□ -0.67
PPH3YDR075W SPT21P35209 758 aa10.86□□□□□ -0.67
PPH3YDR075W YKR023WP36119 530 aaKnown RBP10.81□□□□□ -0.68
PPH3YDR075W UBP10P53874 792 aaPredicted RBP10.62□□□□□ -0.71
PPH3YDR075W TFC8Q12308 588 aa10.6□□□□□ -0.71
PPH3YDR075W HOP09932 586 aa10.58□□□□□ -0.72
PPH3YDR075W MAP2P38174 421 aaKnown RBP10.58□□□□□ -0.72
PPH3YDR075W DCD1P06773 312 aa10.53□□□□□ -0.72
PPH3YDR075W RIM101P33400 625 aa10.46□□□□□ -0.73
PPH3YDR075W SCY1P53009 804 aa10.33□□□□□ -0.76
PPH3YDR075W BUD31P25337 157 aaPredicted RBP10.29□□□□□ -0.76
PPH3YDR075W BCH2P36122 765 aa10.24□□□□□ -0.77
PPH3YDR075W SLX5P32828 619 aaKnown RBP10.22□□□□□ -0.77
PPH3YDR075W TIF4632P39936 914 aaKnown RBP10.21□□□□□ -0.77
PPH3YDR075W TGL3P40308 642 aa10.17□□□□□ -0.78
PPH3YDR075W OXP1P28273 1286 aa10.09□□□□□ -0.79
PPH3YDR075W EPS1P40557 701 aa9.96□□□□□ -0.82
PPH3YDR075W YIL055CP40523 627 aaKnown RBP9.95□□□□□ -0.82
PPH3YDR075W UBP9P39967 754 aa9.94□□□□□ -0.82
PPH3YDR075W BDF1P35817 686 aa9.93□□□□□ -0.82
PPH3YDR075W PTP3P40048 928 aa9.93□□□□□ -0.82
PPH3YDR075W RSM7P47150 247 aa9.81□□□□□ -0.84
PPH3YDR075W SIS1P25294 352 aaKnown RBP9.78□□□□□ -0.84
PPH3YDR075W TFA1P36100 482 aa9.77□□□□□ -0.85
PPH3YDR075W BBC1P47068 1157 aa9.76□□□□□ -0.85
PPH3YDR075W YAH1Q12184 172 aaKnown RBP9.74□□□□□ -0.85
PPH3YDR075W AI2P03876 854 aa9.72□□□□□ -0.85
PPH3YDR075W MST1P07236 462 aa9.72□□□□□ -0.85
PPH3YDR075W YOR238WQ08634 303 aa9.68□□□□□ -0.86
PPH3YDR075W NSR1P27476 414 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
PPH3YDR075W YLR271WQ06152 274 aa9.59□□□□□ -0.87
PPH3YDR075W YAP5P40574 245 aa9.57□□□□□ -0.88
PPH3YDR075W YBL029C-AQ3E756 94 aa9.56□□□□□ -0.88
PPH3YDR075W VNX1P42839 908 aa9.48□□□□□ -0.89
PPH3YDR075W PSD2P53037 1138 aaKnown RBP9.47□□□□□ -0.89
PPH3YDR075W SSP1P38871 571 aa9.41□□□□□ -0.9
PPH3YDR075W SPP1Q03012 353 aa9.39□□□□□ -0.91
PPH3YDR075W WSC3Q12215 556 aa9.39□□□□□ -0.91
PPH3YDR075W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
PPH3YDR075W MRM1P25270 412 aa9.36□□□□□ -0.91
PPH3YDR075W GTT3P39996 337 aa9.35□□□□□ -0.91
PPH3YDR075W TIF11P38912 153 aaKnown RBP9.29□□□□□ -0.92
PPH3YDR075W PIB1Q06651 286 aa9.28□□□□□ -0.92
PPH3YDR075W MGA2P40578 1113 aa9.22□□□□□ -0.93
PPH3YDR075W CST9Q06032 482 aa9.22□□□□□ -0.93
PPH3YDR075W AIR2Q12476 344 aaKnown RBP9.19□□□□□ -0.94
PPH3YDR075W ULI1P43604 169 aa9.18□□□□□ -0.94
PPH3YDR075W VPS29P38759 282 aa9.17□□□□□ -0.94
PPH3YDR075W FKH1P40466 484 aa9.17□□□□□ -0.94
PPH3YDR075W YMR1P47147 688 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
PPH3YDR075W RTG3P38165 486 aa9.16□□□□□ -0.94
PPH3YDR075W IOC2Q12072 812 aa9.16□□□□□ -0.94
PPH3YDR075W LDB19Q12502 818 aa9.14□□□□□ -0.95
PPH3YDR075W DBP1P24784 617 aaKnown RBP9.13□□□□□ -0.95
PPH3YDR075W YJL171CP46992 396 aa9.13□□□□□ -0.95
PPH3YDR075W MSB4Q12317 492 aa9.13□□□□□ -0.95
PPH3YDR075W EAP1P36041 632 aaKnown RBP9.09□□□□□ -0.95
PPH3YDR075W YFR006WP43590 535 aa9.09□□□□□ -0.95
PPH3YDR075W YOL036WQ08206 761 aa9.07□□□□□ -0.96
PPH3YDR075W STS1P38637 319 aa9.06□□□□□ -0.96
PPH3YDR075W SET4P42948 560 aa9.06□□□□□ -0.96
PPH3YDR075W VMA1P17255 1071 aaKnown RBP9.03□□□□□ -0.96
PPH3YDR075W RCR1P38212 213 aa9.02□□□□□ -0.97
PPH3YDR075W TRP5P00931 707 aaKnown RBP9.01□□□□□ -0.97
PPH3YDR075W SAM3Q08986 587 aa9.01□□□□□ -0.97
PPH3YDR075W BMT6Q12291 365 aa9□□□□□ -0.97
PPH3YDR075W RTG1P32607 177 aa8.97□□□□□ -0.97
PPH3YDR075W NCR1Q12200 1170 aa8.94□□□□□ -0.98
PPH3YDR075W YNL035CP53962 389 aaKnown RBP8.93□□□□□ -0.98
PPH3YDR075W SEC61P32915 480 aa8.9□□□□□ -0.98
PPH3YDR075W GYP5Q12344 894 aa8.87□□□□□ -0.99
PPH3YDR075W ABP1P15891 592 aaKnown RBP8.85□□□□□ -0.99
PPH3YDR075W JIP4Q03361 876 aa8.82□□□□□ -1
PPH3YDR075W TFG1P41895 735 aaPredicted RBP8.81□□□□□ -1
PPH3YDR075W DAN4P47179 1161 aa8.81□□□□□ -1
PPH3YDR075W HTA1P04911 132 aaKnown RBP8.8□□□□□ -1
PPH3YDR075W HTA2P04912 132 aa8.8□□□□□ -1
PPH3YDR075W DCW1P36091 449 aa8.79□□□□□ -1
PPH3YDR075W PTC4P38089 393 aa8.75□□□□□ -1.01
PPH3YDR075W SAP30P38429 201 aa8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms