RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC5, Length 447 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC5YDR059C MTC1P47018 478 aaKnown RBP17.75■□□□□ 0.43
UBC5YDR059C DRS1P32892 752 aaKnown RBP16.64■□□□□ 0.25
UBC5YDR059C FAP1P53971 965 aa15.81■□□□□ 0.12
UBC5YDR059C PRI1P10363 409 aa14.9□□□□□ -0.02
UBC5YDR059C PRY3P47033 881 aa14.85□□□□□ -0.03
UBC5YDR059C AAD16Q02895 342 aa14.79□□□□□ -0.04
UBC5YDR059C ISW2Q08773 1120 aa14.69□□□□□ -0.06
UBC5YDR059C DIP2Q12220 943 aaPredicted RBP14.56□□□□□ -0.08
UBC5YDR059C RPG1P38249 964 aaKnown RBP14.5□□□□□ -0.09
UBC5YDR059C AVT3P36062 692 aa14.07□□□□□ -0.16
UBC5YDR059C RSE1Q04693 1361 aaKnown RBP14.06□□□□□ -0.16
UBC5YDR059C TSR3Q12094 313 aaKnown RBP14.05□□□□□ -0.16
UBC5YDR059C YCK3P39962 524 aa14.03□□□□□ -0.16
UBC5YDR059C HAA1Q12753 694 aaKnown RBP13.99□□□□□ -0.17
UBC5YDR059C BFR2Q06631 534 aaKnown RBP13.88□□□□□ -0.19
UBC5YDR059C RPL17AP05740 184 aaKnown RBP13.59□□□□□ -0.23
UBC5YDR059C RPL17BP46990 184 aaKnown RBP13.59□□□□□ -0.23
UBC5YDR059C REB1P21538 810 aa13.53□□□□□ -0.24
UBC5YDR059C MRPL32P25348 183 aa13.53□□□□□ -0.24
UBC5YDR059C SPT21P35209 758 aa13.04□□□□□ -0.32
UBC5YDR059C YGL015CP33199 130 aa12.97□□□□□ -0.33
UBC5YDR059C YKR023WP36119 530 aaKnown RBP12.85□□□□□ -0.35
UBC5YDR059C CDC27P38042 758 aa12.85□□□□□ -0.35
UBC5YDR059C RIM101P33400 625 aa12.61□□□□□ -0.39
UBC5YDR059C TFC8Q12308 588 aa12.6□□□□□ -0.39
UBC5YDR059C HOP09932 586 aa12.56□□□□□ -0.4
UBC5YDR059C UBP10P53874 792 aaPredicted RBP12.54□□□□□ -0.4
UBC5YDR059C DCD1P06773 312 aa12.49□□□□□ -0.41
UBC5YDR059C MAP2P38174 421 aaKnown RBP12.44□□□□□ -0.42
UBC5YDR059C TFA1P36100 482 aa12.3□□□□□ -0.44
UBC5YDR059C SCY1P53009 804 aa12.21□□□□□ -0.45
UBC5YDR059C BCH2P36122 765 aa12.18□□□□□ -0.46
UBC5YDR059C OXP1P28273 1286 aa12.16□□□□□ -0.46
UBC5YDR059C SLX5P32828 619 aaKnown RBP12.08□□□□□ -0.48
UBC5YDR059C TIF4632P39936 914 aaKnown RBP12.02□□□□□ -0.49
UBC5YDR059C YIL055CP40523 627 aaKnown RBP11.99□□□□□ -0.49
UBC5YDR059C PTP3P40048 928 aa11.97□□□□□ -0.49
UBC5YDR059C TGL3P40308 642 aa11.95□□□□□ -0.5
UBC5YDR059C EPS1P40557 701 aa11.89□□□□□ -0.51
UBC5YDR059C BDF1P35817 686 aa11.84□□□□□ -0.51
UBC5YDR059C BUD31P25337 157 aaPredicted RBP11.83□□□□□ -0.52
UBC5YDR059C RSM7P47150 247 aa11.82□□□□□ -0.52
UBC5YDR059C YAH1Q12184 172 aaKnown RBP11.8□□□□□ -0.52
UBC5YDR059C BBC1P47068 1157 aa11.73□□□□□ -0.53
UBC5YDR059C AI2P03876 854 aa11.7□□□□□ -0.54
UBC5YDR059C YLR271WQ06152 274 aa11.63□□□□□ -0.55
UBC5YDR059C UBP9P39967 754 aa11.56□□□□□ -0.56
UBC5YDR059C SSP1P38871 571 aa11.53□□□□□ -0.56
UBC5YDR059C NSR1P27476 414 aaKnown RBP RIP-Chip data11.5□□□□□ -0.57not detected
UBC5YDR059C MST1P07236 462 aa11.47□□□□□ -0.57
UBC5YDR059C PSD2P53037 1138 aaKnown RBP11.47□□□□□ -0.57
UBC5YDR059C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.47□□□□□ -0.57not detected
UBC5YDR059C YOR238WQ08634 303 aa11.43□□□□□ -0.58
UBC5YDR059C YAP5P40574 245 aa11.38□□□□□ -0.59
UBC5YDR059C MRM1P25270 412 aa11.28□□□□□ -0.6
UBC5YDR059C SIS1P25294 352 aaKnown RBP11.25□□□□□ -0.61
UBC5YDR059C MGA2P40578 1113 aa11.25□□□□□ -0.61
UBC5YDR059C YBL029C-AQ3E756 94 aa11.23□□□□□ -0.61
UBC5YDR059C CST9Q06032 482 aa11.22□□□□□ -0.61
UBC5YDR059C VNX1P42839 908 aa11.14□□□□□ -0.63
UBC5YDR059C GTT3P39996 337 aa11.1□□□□□ -0.63
UBC5YDR059C RTG3P38165 486 aa11.07□□□□□ -0.64
UBC5YDR059C WSC3Q12215 556 aa11.06□□□□□ -0.64
UBC5YDR059C PIB1Q06651 286 aa11.05□□□□□ -0.64
UBC5YDR059C VPS29P38759 282 aa11.04□□□□□ -0.64
UBC5YDR059C YMR1P47147 688 aaKnown RBP RIP-Chip data11.03□□□□□ -0.64not detected
UBC5YDR059C SPP1Q03012 353 aa11.03□□□□□ -0.64
UBC5YDR059C TIF11P38912 153 aaKnown RBP10.97□□□□□ -0.65
UBC5YDR059C DBP1P24784 617 aaKnown RBP10.96□□□□□ -0.65
UBC5YDR059C RCR1P38212 213 aa10.93□□□□□ -0.66
UBC5YDR059C STS1P38637 319 aa10.91□□□□□ -0.66
UBC5YDR059C YFR006WP43590 535 aa10.9□□□□□ -0.66
UBC5YDR059C MSB4Q12317 492 aa10.89□□□□□ -0.67
UBC5YDR059C VMA1P17255 1071 aaKnown RBP10.85□□□□□ -0.67
UBC5YDR059C ULI1P43604 169 aa10.83□□□□□ -0.68
UBC5YDR059C YOL036WQ08206 761 aa10.83□□□□□ -0.68
UBC5YDR059C EAP1P36041 632 aaKnown RBP10.81□□□□□ -0.68
UBC5YDR059C IOC2Q12072 812 aa10.81□□□□□ -0.68
UBC5YDR059C FKH1P40466 484 aa10.8□□□□□ -0.68
UBC5YDR059C SAM3Q08986 587 aa10.8□□□□□ -0.68
UBC5YDR059C SET4P42948 560 aa10.78□□□□□ -0.68
UBC5YDR059C LDB19Q12502 818 aa10.78□□□□□ -0.68
UBC5YDR059C AIR2Q12476 344 aaKnown RBP10.77□□□□□ -0.69
UBC5YDR059C TRP5P00931 707 aaKnown RBP10.7□□□□□ -0.7
UBC5YDR059C RAM2P29703 316 aa10.67□□□□□ -0.7
UBC5YDR059C ABP1P15891 592 aaKnown RBP10.66□□□□□ -0.7
UBC5YDR059C YJL171CP46992 396 aa10.66□□□□□ -0.7
UBC5YDR059C MAK11P20484 414 aaKnown RBP10.65□□□□□ -0.7
UBC5YDR059C GYP5Q12344 894 aa10.63□□□□□ -0.71
UBC5YDR059C RTG1P32607 177 aa10.61□□□□□ -0.71
UBC5YDR059C YNL035CP53962 389 aaKnown RBP10.6□□□□□ -0.71
UBC5YDR059C SEC61P32915 480 aa10.57□□□□□ -0.72
UBC5YDR059C HTA1P04911 132 aaKnown RBP10.55□□□□□ -0.72
UBC5YDR059C HTA2P04912 132 aa10.55□□□□□ -0.72
UBC5YDR059C NCR1Q12200 1170 aa10.55□□□□□ -0.72
UBC5YDR059C BMT6Q12291 365 aa10.55□□□□□ -0.72
UBC5YDR059C MIF2P35201 549 aa10.53□□□□□ -0.72
UBC5YDR059C JIP4Q03361 876 aa10.53□□□□□ -0.72
UBC5YDR059C DCW1P36091 449 aa10.52□□□□□ -0.73
UBC5YDR059C GRE2Q12068 342 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms