RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C MTC1P47018 478 aaKnown RBP19.78■□□□□ 0.76
YDR008CYDR008C FAP1P53971 965 aa19.58■□□□□ 0.72
YDR008CYDR008C PRY3P47033 881 aa18.49■□□□□ 0.55
YDR008CYDR008C AAD16Q02895 342 aa17.64■□□□□ 0.41
YDR008CYDR008C PRI1P10363 409 aa17.57■□□□□ 0.4
YDR008CYDR008C YCK3P39962 524 aa17.54■□□□□ 0.4
YDR008CYDR008C HAA1Q12753 694 aaKnown RBP17.18■□□□□ 0.34
YDR008CYDR008C DRS1P32892 752 aaKnown RBP16.92■□□□□ 0.3
YDR008CYDR008C ISW2Q08773 1120 aa16.68■□□□□ 0.26
YDR008CYDR008C RPG1P38249 964 aaKnown RBP16.64■□□□□ 0.25
YDR008CYDR008C TSR3Q12094 313 aaKnown RBP16.58■□□□□ 0.24
YDR008CYDR008C MRPL32P25348 183 aa15.84■□□□□ 0.13
YDR008CYDR008C YGL015CP33199 130 aa15.6■□□□□ 0.09
YDR008CYDR008C DIP2Q12220 943 aaPredicted RBP15.41■□□□□ 0.06
YDR008CYDR008C RSE1Q04693 1361 aaKnown RBP15.29■□□□□ 0.04
YDR008CYDR008C BUD31P25337 157 aaPredicted RBP15.03■□□□□ -0
YDR008CYDR008C REB1P21538 810 aa14.98□□□□□ -0.01
YDR008CYDR008C RPL17AP05740 184 aaKnown RBP14.96□□□□□ -0.01
YDR008CYDR008C RPL17BP46990 184 aaKnown RBP14.96□□□□□ -0.01
YDR008CYDR008C CDC27P38042 758 aa14.88□□□□□ -0.03
YDR008CYDR008C MAP2P38174 421 aaKnown RBP14.57□□□□□ -0.08
YDR008CYDR008C UBP10P53874 792 aaPredicted RBP14.51□□□□□ -0.09
YDR008CYDR008C YKR023WP36119 530 aaKnown RBP14.45□□□□□ -0.1
YDR008CYDR008C AVT3P36062 692 aa14.43□□□□□ -0.1
YDR008CYDR008C SPT21P35209 758 aa14.22□□□□□ -0.13
YDR008CYDR008C DCD1P06773 312 aa14.19□□□□□ -0.14
YDR008CYDR008C HOP09932 586 aa14.17□□□□□ -0.14
YDR008CYDR008C SIS1P25294 352 aaKnown RBP14.14□□□□□ -0.15
YDR008CYDR008C TFC8Q12308 588 aa14.11□□□□□ -0.15
YDR008CYDR008C SCY1P53009 804 aa13.98□□□□□ -0.17
YDR008CYDR008C UBP9P39967 754 aa13.91□□□□□ -0.18
YDR008CYDR008C TIF4632P39936 914 aaKnown RBP13.9□□□□□ -0.18
YDR008CYDR008C TGL3P40308 642 aa13.9□□□□□ -0.18
YDR008CYDR008C SLX5P32828 619 aaKnown RBP13.83□□□□□ -0.2
YDR008CYDR008C BCH2P36122 765 aa13.62□□□□□ -0.23
YDR008CYDR008C RIM101P33400 625 aa13.35□□□□□ -0.27
YDR008CYDR008C BFR2Q06631 534 aaKnown RBP13.3□□□□□ -0.28
YDR008CYDR008C YBL029C-AQ3E756 94 aa13.26□□□□□ -0.29
YDR008CYDR008C MST1P07236 462 aa13.17□□□□□ -0.3
YDR008CYDR008C EPS1P40557 701 aa13.14□□□□□ -0.31
YDR008CYDR008C BDF1P35817 686 aa13.13□□□□□ -0.31
YDR008CYDR008C YOR238WQ08634 303 aa13.02□□□□□ -0.33
YDR008CYDR008C VNX1P42839 908 aa13.01□□□□□ -0.33
YDR008CYDR008C OXP1P28273 1286 aa12.91□□□□□ -0.34
YDR008CYDR008C SPP1Q03012 353 aa12.87□□□□□ -0.35
YDR008CYDR008C WSC3Q12215 556 aa12.81□□□□□ -0.36
YDR008CYDR008C AIR2Q12476 344 aaKnown RBP12.8□□□□□ -0.36
YDR008CYDR008C NSR1P27476 414 aaKnown RBP RIP-Chip data12.79□□□□□ -0.36not detected
YDR008CYDR008C PTP3P40048 928 aa12.7□□□□□ -0.38
YDR008CYDR008C YAP5P40574 245 aa12.7□□□□□ -0.38
YDR008CYDR008C FKH1P40466 484 aa12.69□□□□□ -0.38
YDR008CYDR008C YJL171CP46992 396 aa12.67□□□□□ -0.38
YDR008CYDR008C TIF11P38912 153 aaKnown RBP12.62□□□□□ -0.39
YDR008CYDR008C YIL055CP40523 627 aaKnown RBP12.61□□□□□ -0.39
YDR008CYDR008C BBC1P47068 1157 aa12.53□□□□□ -0.4
YDR008CYDR008C AI2P03876 854 aa12.5□□□□□ -0.41
YDR008CYDR008C RSM7P47150 247 aa12.47□□□□□ -0.41
YDR008CYDR008C LDB19Q12502 818 aa12.47□□□□□ -0.41
YDR008CYDR008C GTT3P39996 337 aa12.46□□□□□ -0.41
YDR008CYDR008C IOC2Q12072 812 aa12.4□□□□□ -0.42
YDR008CYDR008C ULI1P43604 169 aa12.39□□□□□ -0.43
YDR008CYDR008C BMT6Q12291 365 aa12.39□□□□□ -0.43
YDR008CYDR008C PIB1Q06651 286 aa12.33□□□□□ -0.44
YDR008CYDR008C YAH1Q12184 172 aaKnown RBP12.3□□□□□ -0.44
YDR008CYDR008C RTG1P32607 177 aa12.1□□□□□ -0.47
YDR008CYDR008C MSB4Q12317 492 aa12.07□□□□□ -0.48
YDR008CYDR008C NCR1Q12200 1170 aa12.04□□□□□ -0.48
YDR008CYDR008C TRP5P00931 707 aaKnown RBP12.03□□□□□ -0.48
YDR008CYDR008C EAP1P36041 632 aaKnown RBP12.03□□□□□ -0.48
YDR008CYDR008C SET4P42948 560 aa12.03□□□□□ -0.48
YDR008CYDR008C YLR271WQ06152 274 aa12.03□□□□□ -0.48
YDR008CYDR008C YOL036WQ08206 761 aa12.01□□□□□ -0.49
YDR008CYDR008C PSD2P53037 1138 aaKnown RBP12□□□□□ -0.49
YDR008CYDR008C MRM1P25270 412 aa11.98□□□□□ -0.49
YDR008CYDR008C YNL035CP53962 389 aaKnown RBP11.91□□□□□ -0.5
YDR008CYDR008C SEC61P32915 480 aa11.88□□□□□ -0.51
YDR008CYDR008C DBP1P24784 617 aaKnown RBP11.79□□□□□ -0.52
YDR008CYDR008C YFR006WP43590 535 aa11.79□□□□□ -0.52
YDR008CYDR008C VPS29P38759 282 aa11.76□□□□□ -0.53
YDR008CYDR008C YMR1P47147 688 aaKnown RBP RIP-Chip data11.76□□□□□ -0.53not detected
YDR008CYDR008C VMA1P17255 1071 aaKnown RBP11.75□□□□□ -0.53
YDR008CYDR008C BCK2P33306 851 aa11.75□□□□□ -0.53
YDR008CYDR008C SAP30P38429 201 aa11.75□□□□□ -0.53
YDR008CYDR008C TFG1P41895 735 aaPredicted RBP11.7□□□□□ -0.54
YDR008CYDR008C SAM3Q08986 587 aa11.7□□□□□ -0.54
YDR008CYDR008C STS1P38637 319 aa11.69□□□□□ -0.54
YDR008CYDR008C DAN4P47179 1161 aa11.69□□□□□ -0.54
YDR008CYDR008C CHL1P22516 861 aaPredicted RBP11.63□□□□□ -0.55
YDR008CYDR008C YDL129WQ07555 291 aa11.6□□□□□ -0.55
YDR008CYDR008C PRE3P38624 215 aa11.56□□□□□ -0.56
YDR008CYDR008C JIP4Q03361 876 aa11.56□□□□□ -0.56
YDR008CYDR008C RTG3P38165 486 aa11.55□□□□□ -0.56
YDR008CYDR008C CST9Q06032 482 aa11.55□□□□□ -0.56
YDR008CYDR008C GYP5Q12344 894 aa11.48□□□□□ -0.57
YDR008CYDR008C YDR344CQ05510 147 aa11.46□□□□□ -0.57
YDR008CYDR008C RCR1P38212 213 aa11.45□□□□□ -0.58
YDR008CYDR008C DCW1P36091 449 aa11.44□□□□□ -0.58
YDR008CYDR008C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
YDR008CYDR008C HTA1P04911 132 aaKnown RBP11.41□□□□□ -0.58
YDR008CYDR008C HTA2P04912 132 aa11.41□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms