RNA–Protein interactions for RNA: YDL235C

YPD1, Transcript of Osmotic stress-responsive phosphorelay intermediate sensor protein, yeastyeast

Gene YPD1, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPD1YDL235C MTC1P47018 478 aaKnown RBP11.62□□□□□ -0.55
YPD1YDL235C FAP1P53971 965 aa11.18□□□□□ -0.62
YPD1YDL235C DRS1P32892 752 aaKnown RBP10.89□□□□□ -0.67
YPD1YDL235C PRY3P47033 881 aa10.6□□□□□ -0.71
YPD1YDL235C YCK3P39962 524 aa10.06□□□□□ -0.8
YPD1YDL235C HAA1Q12753 694 aaKnown RBP9.91□□□□□ -0.82
YPD1YDL235C AAD16Q02895 342 aa9.82□□□□□ -0.84
YPD1YDL235C PRI1P10363 409 aa9.81□□□□□ -0.84
YPD1YDL235C ISW2Q08773 1120 aa9.76□□□□□ -0.85
YPD1YDL235C RPG1P38249 964 aaKnown RBP9.59□□□□□ -0.87
YPD1YDL235C DIP2Q12220 943 aaPredicted RBP9.55□□□□□ -0.88
YPD1YDL235C BFR2Q06631 534 aaKnown RBP9.33□□□□□ -0.92
YPD1YDL235C TSR3Q12094 313 aaKnown RBP9.29□□□□□ -0.92
YPD1YDL235C RSE1Q04693 1361 aaKnown RBP9.27□□□□□ -0.93
YPD1YDL235C AVT3P36062 692 aa9.13□□□□□ -0.95
YPD1YDL235C MRPL32P25348 183 aa9.03□□□□□ -0.96
YPD1YDL235C REB1P21538 810 aa9□□□□□ -0.97
YPD1YDL235C BUD31P25337 157 aaPredicted RBP8.99□□□□□ -0.97
YPD1YDL235C RPL17AP05740 184 aaKnown RBP8.95□□□□□ -0.98
YPD1YDL235C RPL17BP46990 184 aaKnown RBP8.95□□□□□ -0.98
YPD1YDL235C TFA1P36100 482 aa8.83□□□□□ -1
YPD1YDL235C YGL015CP33199 130 aa8.81□□□□□ -1
YPD1YDL235C SPT21P35209 758 aa8.42□□□□□ -1.06
YPD1YDL235C CDC27P38042 758 aa8.39□□□□□ -1.07
YPD1YDL235C YKR023WP36119 530 aaKnown RBP8.37□□□□□ -1.07
YPD1YDL235C SIS1P25294 352 aaKnown RBP8.3□□□□□ -1.08
YPD1YDL235C HOP09932 586 aa8.26□□□□□ -1.09
YPD1YDL235C UBP10P53874 792 aaPredicted RBP8.26□□□□□ -1.09
YPD1YDL235C TFC8Q12308 588 aa8.24□□□□□ -1.09
YPD1YDL235C DCD1P06773 312 aa8.19□□□□□ -1.1
YPD1YDL235C MAP2P38174 421 aaKnown RBP8.19□□□□□ -1.1
YPD1YDL235C RIM101P33400 625 aa8.18□□□□□ -1.1
YPD1YDL235C SCY1P53009 804 aa8.06□□□□□ -1.12
YPD1YDL235C TIF4632P39936 914 aaKnown RBP8.05□□□□□ -1.12
YPD1YDL235C SLX5P32828 619 aaKnown RBP8□□□□□ -1.13
YPD1YDL235C BCH2P36122 765 aa7.98□□□□□ -1.13
YPD1YDL235C YIL055CP40523 627 aaKnown RBP7.98□□□□□ -1.13
YPD1YDL235C UBP9P39967 754 aa7.93□□□□□ -1.14
YPD1YDL235C PTP3P40048 928 aa7.93□□□□□ -1.14
YPD1YDL235C TGL3P40308 642 aa7.93□□□□□ -1.14
YPD1YDL235C OXP1P28273 1286 aa7.87□□□□□ -1.15
YPD1YDL235C EPS1P40557 701 aa7.79□□□□□ -1.16
YPD1YDL235C BBC1P47068 1157 aa7.79□□□□□ -1.16
YPD1YDL235C YAH1Q12184 172 aaKnown RBP7.76□□□□□ -1.17
YPD1YDL235C BDF1P35817 686 aa7.75□□□□□ -1.17
YPD1YDL235C RSM7P47150 247 aa7.75□□□□□ -1.17
YPD1YDL235C AI2P03876 854 aa7.67□□□□□ -1.18
YPD1YDL235C YOR238WQ08634 303 aa7.59□□□□□ -1.19
YPD1YDL235C RQC2Q12532 1038 aaKnown RBP7.59□□□□□ -1.19
YPD1YDL235C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
YPD1YDL235C YLR271WQ06152 274 aa7.55□□□□□ -1.2
YPD1YDL235C SSP1P38871 571 aa7.53□□□□□ -1.2
YPD1YDL235C YAP5P40574 245 aa7.53□□□□□ -1.2
YPD1YDL235C MST1P07236 462 aa7.5□□□□□ -1.21
YPD1YDL235C NSR1P27476 414 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
YPD1YDL235C GTT3P39996 337 aa7.42□□□□□ -1.22
YPD1YDL235C PSD2P53037 1138 aaKnown RBP7.42□□□□□ -1.22
YPD1YDL235C YBL029C-AQ3E756 94 aa7.42□□□□□ -1.22
YPD1YDL235C MRM1P25270 412 aa7.4□□□□□ -1.22
YPD1YDL235C WSC3Q12215 556 aa7.37□□□□□ -1.23
YPD1YDL235C SPP1Q03012 353 aa7.36□□□□□ -1.23
YPD1YDL235C DMA1P38823 416 aa7.35□□□□□ -1.23
YPD1YDL235C MGA2P40578 1113 aa7.35□□□□□ -1.23
YPD1YDL235C VNX1P42839 908 aa7.35□□□□□ -1.23
YPD1YDL235C PIB1Q06651 286 aa7.29□□□□□ -1.24
YPD1YDL235C RTG3P38165 486 aa7.28□□□□□ -1.24
YPD1YDL235C CST9Q06032 482 aa7.26□□□□□ -1.25
YPD1YDL235C TIF11P38912 153 aaKnown RBP7.25□□□□□ -1.25
YPD1YDL235C YMR1P47147 688 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
YPD1YDL235C YJL171CP46992 396 aa7.22□□□□□ -1.25
YPD1YDL235C DBP1P24784 617 aaKnown RBP7.2□□□□□ -1.26
YPD1YDL235C EAP1P36041 632 aaKnown RBP7.19□□□□□ -1.26
YPD1YDL235C ULI1P43604 169 aa7.19□□□□□ -1.26
YPD1YDL235C MSB4Q12317 492 aa7.18□□□□□ -1.26
YPD1YDL235C VPS29P38759 282 aa7.16□□□□□ -1.26
YPD1YDL235C YFR006WP43590 535 aa7.15□□□□□ -1.26
YPD1YDL235C LDB19Q12502 818 aa7.14□□□□□ -1.27
YPD1YDL235C SET4P42948 560 aa7.12□□□□□ -1.27
YPD1YDL235C AIR2Q12476 344 aaKnown RBP7.1□□□□□ -1.27
YPD1YDL235C VMA1P17255 1071 aaKnown RBP7.09□□□□□ -1.27
YPD1YDL235C YOL036WQ08206 761 aa7.09□□□□□ -1.27
YPD1YDL235C STS1P38637 319 aa7.08□□□□□ -1.28
YPD1YDL235C RCR1P38212 213 aa7.07□□□□□ -1.28
YPD1YDL235C FKH1P40466 484 aa7.07□□□□□ -1.28
YPD1YDL235C IOC2Q12072 812 aa7.07□□□□□ -1.28
YPD1YDL235C TFG1P41895 735 aaPredicted RBP7.06□□□□□ -1.28
YPD1YDL235C BMT6Q12291 365 aa7.05□□□□□ -1.28
YPD1YDL235C TRP5P00931 707 aaKnown RBP7.04□□□□□ -1.28
YPD1YDL235C RGA2Q06407 1009 aa7.04□□□□□ -1.28
YPD1YDL235C RTG1P32607 177 aa7.03□□□□□ -1.28
YPD1YDL235C NCR1Q12200 1170 aa7.03□□□□□ -1.28
YPD1YDL235C ABP1P15891 592 aaKnown RBP7.02□□□□□ -1.29
YPD1YDL235C SAM3Q08986 587 aa7.02□□□□□ -1.29
YPD1YDL235C YNL035CP53962 389 aaKnown RBP7.01□□□□□ -1.29
YPD1YDL235C GYP5Q12344 894 aa7.01□□□□□ -1.29
YPD1YDL235C SEC61P32915 480 aa6.99□□□□□ -1.29
YPD1YDL235C HTA1P04911 132 aaKnown RBP6.97□□□□□ -1.29
YPD1YDL235C HTA2P04912 132 aa6.97□□□□□ -1.29
YPD1YDL235C RAM2P29703 316 aa6.96□□□□□ -1.3
YPD1YDL235C JIP4Q03361 876 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms