RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	MTC1	P47018	478 aa	Known RBP	7.32	□□□□□ -1.24
YDL196W	YDL196W	FAP1	P53971	965 aa		6.78	□□□□□ -1.32
YDL196W	YDL196W	DRS1	P32892	752 aa	Known RBP	6.67	□□□□□ -1.34
YDL196W	YDL196W	PRY3	P47033	881 aa		6.38	□□□□□ -1.39
YDL196W	YDL196W	PRI1	P10363	409 aa		6.27	□□□□□ -1.41
YDL196W	YDL196W	AAD16	Q02895	342 aa		6.27	□□□□□ -1.41
YDL196W	YDL196W	ISW2	Q08773	1120 aa		6.12	□□□□□ -1.43
YDL196W	YDL196W	RPG1	P38249	964 aa	Known RBP	6.05	□□□□□ -1.44
YDL196W	YDL196W	HAA1	Q12753	694 aa	Known RBP	6	□□□□□ -1.45
YDL196W	YDL196W	YCK3	P39962	524 aa		5.99	□□□□□ -1.45
YDL196W	YDL196W	TSR3	Q12094	313 aa	Known RBP	5.92	□□□□□ -1.46
YDL196W	YDL196W	DIP2	Q12220	943 aa	Predicted RBP	5.92	□□□□□ -1.46
YDL196W	YDL196W	RSE1	Q04693	1361 aa	Known RBP	5.77	□□□□□ -1.49
YDL196W	YDL196W	MRPL32	P25348	183 aa		5.71	□□□□□ -1.5
YDL196W	YDL196W	AVT3	P36062	692 aa		5.64	□□□□□ -1.51
YDL196W	YDL196W	RPL17A	P05740	184 aa	Known RBP	5.59	□□□□□ -1.51
YDL196W	YDL196W	REB1	P21538	810 aa		5.59	□□□□□ -1.51
YDL196W	YDL196W	RPL17B	P46990	184 aa	Known RBP	5.59	□□□□□ -1.51
YDL196W	YDL196W	YGL015C	P33199	130 aa		5.53	□□□□□ -1.52
YDL196W	YDL196W	BFR2	Q06631	534 aa	Known RBP	5.47	□□□□□ -1.53
YDL196W	YDL196W	CDC27	P38042	758 aa		5.36	□□□□□ -1.55
YDL196W	YDL196W	SPT21	P35209	758 aa		5.32	□□□□□ -1.56
YDL196W	YDL196W	YKR023W	P36119	530 aa	Known RBP	5.31	□□□□□ -1.56
YDL196W	YDL196W	UBP10	P53874	792 aa	Predicted RBP	5.25	□□□□□ -1.57
YDL196W	YDL196W	MAP2	P38174	421 aa	Known RBP	5.21	□□□□□ -1.58
YDL196W	YDL196W	TFC8	Q12308	588 aa		5.21	□□□□□ -1.58
YDL196W	YDL196W	HO	P09932	586 aa		5.2	□□□□□ -1.58
YDL196W	YDL196W	DCD1	P06773	312 aa		5.16	□□□□□ -1.58
YDL196W	YDL196W	BUD31	P25337	157 aa	Predicted RBP	5.12	□□□□□ -1.59
YDL196W	YDL196W	RIM101	P33400	625 aa		5.11	□□□□□ -1.59
YDL196W	YDL196W	SCY1	P53009	804 aa		5.09	□□□□□ -1.59
YDL196W	YDL196W	TIF4632	P39936	914 aa	Known RBP	5.06	□□□□□ -1.6
YDL196W	YDL196W	SLX5	P32828	619 aa	Known RBP	5.04	□□□□□ -1.6
YDL196W	YDL196W	BCH2	P36122	765 aa		5.03	□□□□□ -1.6
YDL196W	YDL196W	TGL3	P40308	642 aa		5.03	□□□□□ -1.6
YDL196W	YDL196W	UBP9	P39967	754 aa		4.94	□□□□□ -1.62
YDL196W	YDL196W	OXP1	P28273	1286 aa		4.93	□□□□□ -1.62
YDL196W	YDL196W	YIL055C	P40523	627 aa	Known RBP	4.89	□□□□□ -1.63
YDL196W	YDL196W	EPS1	P40557	701 aa		4.89	□□□□□ -1.63
YDL196W	YDL196W	SIS1	P25294	352 aa	Known RBP	4.87	□□□□□ -1.63
YDL196W	YDL196W	BDF1	P35817	686 aa		4.87	□□□□□ -1.63
YDL196W	YDL196W	PTP3	P40048	928 aa		4.87	□□□□□ -1.63
YDL196W	YDL196W	BBC1	P47068	1157 aa		4.8	□□□□□ -1.64
YDL196W	YDL196W	RSM7	P47150	247 aa		4.8	□□□□□ -1.64
YDL196W	YDL196W	MST1	P07236	462 aa		4.79	□□□□□ -1.64
YDL196W	YDL196W	YOR238W	Q08634	303 aa		4.78	□□□□□ -1.64
YDL196W	YDL196W	AI2	P03876	854 aa		4.77	□□□□□ -1.65
YDL196W	YDL196W	TFA1	P36100	482 aa		4.76	□□□□□ -1.65
YDL196W	YDL196W	YAH1	Q12184	172 aa	Known RBP	4.76	□□□□□ -1.65
YDL196W	YDL196W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
YDL196W	YDL196W	YAP5	P40574	245 aa		4.72	□□□□□ -1.65
YDL196W	YDL196W	YBL029C-A	Q3E756	94 aa		4.72	□□□□□ -1.65
YDL196W	YDL196W	VNX1	P42839	908 aa		4.68	□□□□□ -1.66
YDL196W	YDL196W	YLR271W	Q06152	274 aa		4.68	□□□□□ -1.66
YDL196W	YDL196W	SPP1	Q03012	353 aa		4.65	□□□□□ -1.67
YDL196W	YDL196W	WSC3	Q12215	556 aa		4.64	□□□□□ -1.67
YDL196W	YDL196W	PSD2	P53037	1138 aa	Known RBP	4.63	□□□□□ -1.67
YDL196W	YDL196W	GTT3	P39996	337 aa		4.62	□□□□□ -1.67
YDL196W	YDL196W	TIF11	P38912	153 aa	Known RBP	4.59	□□□□□ -1.67
YDL196W	YDL196W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YDL196W	YDL196W	MRM1	P25270	412 aa		4.58	□□□□□ -1.68
YDL196W	YDL196W	SSP1	P38871	571 aa		4.58	□□□□□ -1.68
YDL196W	YDL196W	PIB1	Q06651	286 aa		4.56	□□□□□ -1.68
YDL196W	YDL196W	AIR2	Q12476	344 aa	Known RBP	4.55	□□□□□ -1.68
YDL196W	YDL196W	FKH1	P40466	484 aa		4.54	□□□□□ -1.68
YDL196W	YDL196W	YJL171C	P46992	396 aa		4.54	□□□□□ -1.68
YDL196W	YDL196W	ULI1	P43604	169 aa		4.53	□□□□□ -1.68
YDL196W	YDL196W	IOC2	Q12072	812 aa		4.51	□□□□□ -1.69
YDL196W	YDL196W	LDB19	Q12502	818 aa		4.51	□□□□□ -1.69
YDL196W	YDL196W	MGA2	P40578	1113 aa		4.5	□□□□□ -1.69
YDL196W	YDL196W	MSB4	Q12317	492 aa		4.5	□□□□□ -1.69
YDL196W	YDL196W	EAP1	P36041	632 aa	Known RBP	4.49	□□□□□ -1.69
YDL196W	YDL196W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
YDL196W	YDL196W	CST9	Q06032	482 aa		4.49	□□□□□ -1.69
YDL196W	YDL196W	DBP1	P24784	617 aa	Known RBP	4.48	□□□□□ -1.69
YDL196W	YDL196W	RTG3	P38165	486 aa		4.48	□□□□□ -1.69
YDL196W	YDL196W	VPS29	P38759	282 aa		4.48	□□□□□ -1.69
YDL196W	YDL196W	SET4	P42948	560 aa		4.46	□□□□□ -1.7
YDL196W	YDL196W	YOL036W	Q08206	761 aa		4.46	□□□□□ -1.7
YDL196W	YDL196W	BMT6	Q12291	365 aa		4.46	□□□□□ -1.7
YDL196W	YDL196W	YFR006W	P43590	535 aa		4.45	□□□□□ -1.7
YDL196W	YDL196W	VMA1	P17255	1071 aa	Known RBP	4.44	□□□□□ -1.7
YDL196W	YDL196W	STS1	P38637	319 aa		4.44	□□□□□ -1.7
YDL196W	YDL196W	TRP5	P00931	707 aa	Known RBP	4.43	□□□□□ -1.7
YDL196W	YDL196W	RTG1	P32607	177 aa		4.43	□□□□□ -1.7
YDL196W	YDL196W	SAM3	Q08986	587 aa		4.42	□□□□□ -1.7
YDL196W	YDL196W	NCR1	Q12200	1170 aa		4.41	□□□□□ -1.7
YDL196W	YDL196W	SEC61	P32915	480 aa		4.4	□□□□□ -1.71
YDL196W	YDL196W	RCR1	P38212	213 aa		4.4	□□□□□ -1.71
YDL196W	YDL196W	YNL035C	P53962	389 aa	Known RBP	4.4	□□□□□ -1.71
YDL196W	YDL196W	ABP1	P15891	592 aa	Known RBP	4.36	□□□□□ -1.71
YDL196W	YDL196W	TFG1	P41895	735 aa	Predicted RBP	4.36	□□□□□ -1.71
YDL196W	YDL196W	GYP5	Q12344	894 aa		4.36	□□□□□ -1.71
YDL196W	YDL196W	JIP4	Q03361	876 aa		4.35	□□□□□ -1.71
YDL196W	YDL196W	DAN4	P47179	1161 aa		4.33	□□□□□ -1.72
YDL196W	YDL196W	HTA1	P04911	132 aa	Known RBP	4.32	□□□□□ -1.72
YDL196W	YDL196W	HTA2	P04912	132 aa		4.32	□□□□□ -1.72
YDL196W	YDL196W	DCW1	P36091	449 aa		4.32	□□□□□ -1.72
YDL196W	YDL196W	PTC4	P38089	393 aa		4.3	□□□□□ -1.72
YDL196W	YDL196W	SAP30	P38429	201 aa		4.3	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms