RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MTC1P47018 478 aaKnown RBP11.61□□□□□ -0.55
CDC36YDL165W FAP1P53971 965 aa11.13□□□□□ -0.63
CDC36YDL165W PRY3P47033 881 aa10.5□□□□□ -0.73
CDC36YDL165W DRS1P32892 752 aaKnown RBP10.21□□□□□ -0.77
CDC36YDL165W AAD16Q02895 342 aa10.16□□□□□ -0.78
CDC36YDL165W PRI1P10363 409 aa10.14□□□□□ -0.79
CDC36YDL165W YCK3P39962 524 aa9.93□□□□□ -0.82
CDC36YDL165W HAA1Q12753 694 aaKnown RBP9.82□□□□□ -0.84
CDC36YDL165W ISW2Q08773 1120 aa9.75□□□□□ -0.85
CDC36YDL165W RPG1P38249 964 aaKnown RBP9.67□□□□□ -0.86
CDC36YDL165W TSR3Q12094 313 aaKnown RBP9.55□□□□□ -0.88
CDC36YDL165W DIP2Q12220 943 aaPredicted RBP9.19□□□□□ -0.94
CDC36YDL165W MRPL32P25348 183 aa9.17□□□□□ -0.94
CDC36YDL165W RSE1Q04693 1361 aaKnown RBP9.05□□□□□ -0.96
CDC36YDL165W YGL015CP33199 130 aa8.97□□□□□ -0.97
CDC36YDL165W REB1P21538 810 aa8.81□□□□□ -1
CDC36YDL165W RPL17AP05740 184 aaKnown RBP8.8□□□□□ -1
CDC36YDL165W RPL17BP46990 184 aaKnown RBP8.8□□□□□ -1
CDC36YDL165W AVT3P36062 692 aa8.68□□□□□ -1.02
CDC36YDL165W CDC27P38042 758 aa8.62□□□□□ -1.03
CDC36YDL165W BUD31P25337 157 aaPredicted RBP8.5□□□□□ -1.05
CDC36YDL165W YKR023WP36119 530 aaKnown RBP8.44□□□□□ -1.06
CDC36YDL165W UBP10P53874 792 aaPredicted RBP8.44□□□□□ -1.06
CDC36YDL165W MAP2P38174 421 aaKnown RBP8.42□□□□□ -1.06
CDC36YDL165W SPT21P35209 758 aa8.4□□□□□ -1.06
CDC36YDL165W HOP09932 586 aa8.27□□□□□ -1.09
CDC36YDL165W TFC8Q12308 588 aa8.27□□□□□ -1.09
CDC36YDL165W DCD1P06773 312 aa8.25□□□□□ -1.09
CDC36YDL165W BFR2Q06631 534 aaKnown RBP8.19□□□□□ -1.1
CDC36YDL165W SCY1P53009 804 aa8.13□□□□□ -1.11
CDC36YDL165W TIF4632P39936 914 aaKnown RBP8.09□□□□□ -1.11
CDC36YDL165W TGL3P40308 642 aa8.08□□□□□ -1.12
CDC36YDL165W SLX5P32828 619 aaKnown RBP8.06□□□□□ -1.12
CDC36YDL165W SIS1P25294 352 aaKnown RBP8.02□□□□□ -1.13
CDC36YDL165W UBP9P39967 754 aa8.01□□□□□ -1.13
CDC36YDL165W RIM101P33400 625 aa7.97□□□□□ -1.13
CDC36YDL165W BCH2P36122 765 aa7.97□□□□□ -1.13
CDC36YDL165W EPS1P40557 701 aa7.73□□□□□ -1.17
CDC36YDL165W BDF1P35817 686 aa7.72□□□□□ -1.17
CDC36YDL165W MST1P07236 462 aa7.68□□□□□ -1.18
CDC36YDL165W OXP1P28273 1286 aa7.68□□□□□ -1.18
CDC36YDL165W YBL029C-AQ3E756 94 aa7.64□□□□□ -1.19
CDC36YDL165W YOR238WQ08634 303 aa7.61□□□□□ -1.19
CDC36YDL165W PTP3P40048 928 aa7.57□□□□□ -1.2
CDC36YDL165W NSR1P27476 414 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
CDC36YDL165W YIL055CP40523 627 aaKnown RBP7.54□□□□□ -1.2
CDC36YDL165W VNX1P42839 908 aa7.54□□□□□ -1.2
CDC36YDL165W YAP5P40574 245 aa7.47□□□□□ -1.21
CDC36YDL165W BBC1P47068 1157 aa7.47□□□□□ -1.21
CDC36YDL165W SPP1Q03012 353 aa7.46□□□□□ -1.22
CDC36YDL165W RSM7P47150 247 aa7.45□□□□□ -1.22
CDC36YDL165W AI2P03876 854 aa7.43□□□□□ -1.22
CDC36YDL165W WSC3Q12215 556 aa7.43□□□□□ -1.22
CDC36YDL165W AIR2Q12476 344 aaKnown RBP7.38□□□□□ -1.23
CDC36YDL165W YAH1Q12184 172 aaKnown RBP7.36□□□□□ -1.23
CDC36YDL165W TIF11P38912 153 aaKnown RBP7.35□□□□□ -1.23
CDC36YDL165W FKH1P40466 484 aa7.34□□□□□ -1.23
CDC36YDL165W YJL171CP46992 396 aa7.32□□□□□ -1.24
CDC36YDL165W GTT3P39996 337 aa7.31□□□□□ -1.24
CDC36YDL165W LDB19Q12502 818 aa7.24□□□□□ -1.25
CDC36YDL165W ULI1P43604 169 aa7.23□□□□□ -1.25
CDC36YDL165W YLR271WQ06152 274 aa7.22□□□□□ -1.25
CDC36YDL165W IOC2Q12072 812 aa7.22□□□□□ -1.25
CDC36YDL165W PIB1Q06651 286 aa7.21□□□□□ -1.26
CDC36YDL165W PSD2P53037 1138 aaKnown RBP7.18□□□□□ -1.26
CDC36YDL165W BMT6Q12291 365 aa7.18□□□□□ -1.26
CDC36YDL165W MRM1P25270 412 aa7.13□□□□□ -1.27
CDC36YDL165W MSB4Q12317 492 aa7.12□□□□□ -1.27
CDC36YDL165W EAP1P36041 632 aaKnown RBP7.09□□□□□ -1.27
CDC36YDL165W RTG1P32607 177 aa7.06□□□□□ -1.28
CDC36YDL165W YOL036WQ08206 761 aa7.06□□□□□ -1.28
CDC36YDL165W SET4P42948 560 aa7.05□□□□□ -1.28
CDC36YDL165W TRP5P00931 707 aaKnown RBP7.04□□□□□ -1.28
CDC36YDL165W NCR1Q12200 1170 aa7.03□□□□□ -1.28
CDC36YDL165W TFA1P36100 482 aa7.02□□□□□ -1.29
CDC36YDL165W YMR1P47147 688 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
CDC36YDL165W DBP1P24784 617 aaKnown RBP6.99□□□□□ -1.29
CDC36YDL165W VPS29P38759 282 aa6.99□□□□□ -1.29
CDC36YDL165W YNL035CP53962 389 aaKnown RBP6.99□□□□□ -1.29
CDC36YDL165W SEC61P32915 480 aa6.98□□□□□ -1.29
CDC36YDL165W YFR006WP43590 535 aa6.97□□□□□ -1.29
CDC36YDL165W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
CDC36YDL165W VMA1P17255 1071 aaKnown RBP6.96□□□□□ -1.3
CDC36YDL165W SSP1P38871 571 aa6.95□□□□□ -1.3
CDC36YDL165W STS1P38637 319 aa6.94□□□□□ -1.3
CDC36YDL165W SAM3Q08986 587 aa6.94□□□□□ -1.3
CDC36YDL165W RTG3P38165 486 aa6.93□□□□□ -1.3
CDC36YDL165W CST9Q06032 482 aa6.93□□□□□ -1.3
CDC36YDL165W TFG1P41895 735 aaPredicted RBP6.88□□□□□ -1.31
CDC36YDL165W DAN4P47179 1161 aa6.87□□□□□ -1.31
CDC36YDL165W SAP30P38429 201 aa6.86□□□□□ -1.31
CDC36YDL165W MGA2P40578 1113 aa6.86□□□□□ -1.31
CDC36YDL165W JIP4Q03361 876 aa6.84□□□□□ -1.31
CDC36YDL165W BCK2P33306 851 aa6.82□□□□□ -1.32
CDC36YDL165W RCR1P38212 213 aa6.82□□□□□ -1.32
CDC36YDL165W ABP1P15891 592 aaKnown RBP6.81□□□□□ -1.32
CDC36YDL165W YDL129WQ07555 291 aa6.81□□□□□ -1.32
CDC36YDL165W GYP5Q12344 894 aa6.81□□□□□ -1.32
CDC36YDL165W CHL1P22516 861 aaPredicted RBP6.8□□□□□ -1.32
CDC36YDL165W HTA1P04911 132 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms