RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeastyeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VCX1YDL128W MTC1P47018 478 aaKnown RBP14.52□□□□□ -0.09
VCX1YDL128W DRS1P32892 752 aaKnown RBP13.67□□□□□ -0.22
VCX1YDL128W FAP1P53971 965 aa13.14□□□□□ -0.31
VCX1YDL128W PRY3P47033 881 aa12.33□□□□□ -0.44
VCX1YDL128W PRI1P10363 409 aa12.21□□□□□ -0.45
VCX1YDL128W AAD16Q02895 342 aa12.14□□□□□ -0.47
VCX1YDL128W ISW2Q08773 1120 aa12.05□□□□□ -0.48
VCX1YDL128W DIP2Q12220 943 aaPredicted RBP11.95□□□□□ -0.5
VCX1YDL128W RPG1P38249 964 aaKnown RBP11.94□□□□□ -0.5
VCX1YDL128W TSR3Q12094 313 aaKnown RBP11.62□□□□□ -0.55
VCX1YDL128W YCK3P39962 524 aa11.54□□□□□ -0.56
VCX1YDL128W RSE1Q04693 1361 aaKnown RBP11.53□□□□□ -0.56
VCX1YDL128W HAA1Q12753 694 aaKnown RBP11.48□□□□□ -0.57
VCX1YDL128W AVT3P36062 692 aa11.47□□□□□ -0.57
VCX1YDL128W BFR2Q06631 534 aaKnown RBP11.38□□□□□ -0.59
VCX1YDL128W RPL17AP05740 184 aaKnown RBP11.18□□□□□ -0.62
VCX1YDL128W RPL17BP46990 184 aaKnown RBP11.18□□□□□ -0.62
VCX1YDL128W REB1P21538 810 aa11.15□□□□□ -0.62
VCX1YDL128W MRPL32P25348 183 aa11.13□□□□□ -0.63
VCX1YDL128W SPT21P35209 758 aa10.64□□□□□ -0.71
VCX1YDL128W YGL015CP33199 130 aa10.62□□□□□ -0.71
VCX1YDL128W CDC27P38042 758 aa10.57□□□□□ -0.72
VCX1YDL128W YKR023WP36119 530 aaKnown RBP10.53□□□□□ -0.72
VCX1YDL128W HOP09932 586 aa10.39□□□□□ -0.75
VCX1YDL128W DCD1P06773 312 aa10.37□□□□□ -0.75
VCX1YDL128W TFC8Q12308 588 aa10.32□□□□□ -0.76
VCX1YDL128W RIM101P33400 625 aa10.27□□□□□ -0.77
VCX1YDL128W MAP2P38174 421 aaKnown RBP10.25□□□□□ -0.77
VCX1YDL128W UBP10P53874 792 aaPredicted RBP10.21□□□□□ -0.77
VCX1YDL128W SCY1P53009 804 aa10.08□□□□□ -0.8
VCX1YDL128W BCH2P36122 765 aa10□□□□□ -0.81
VCX1YDL128W OXP1P28273 1286 aa9.95□□□□□ -0.82
VCX1YDL128W TFA1P36100 482 aa9.95□□□□□ -0.82
VCX1YDL128W SLX5P32828 619 aaKnown RBP9.91□□□□□ -0.82
VCX1YDL128W PTP3P40048 928 aa9.88□□□□□ -0.83
VCX1YDL128W YIL055CP40523 627 aaKnown RBP9.86□□□□□ -0.83
VCX1YDL128W TIF4632P39936 914 aaKnown RBP9.83□□□□□ -0.84
VCX1YDL128W YAH1Q12184 172 aaKnown RBP9.77□□□□□ -0.85
VCX1YDL128W EPS1P40557 701 aa9.76□□□□□ -0.85
VCX1YDL128W TGL3P40308 642 aa9.74□□□□□ -0.85
VCX1YDL128W BDF1P35817 686 aa9.71□□□□□ -0.86
VCX1YDL128W BUD31P25337 157 aaPredicted RBP9.69□□□□□ -0.86
VCX1YDL128W RSM7P47150 247 aa9.67□□□□□ -0.86
VCX1YDL128W AI2P03876 854 aa9.6□□□□□ -0.87
VCX1YDL128W BBC1P47068 1157 aa9.6□□□□□ -0.87
VCX1YDL128W YLR271WQ06152 274 aa9.52□□□□□ -0.89
VCX1YDL128W UBP9P39967 754 aa9.47□□□□□ -0.89
VCX1YDL128W SSP1P38871 571 aa9.4□□□□□ -0.9
VCX1YDL128W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
VCX1YDL128W YOR238WQ08634 303 aa9.35□□□□□ -0.91
VCX1YDL128W PSD2P53037 1138 aaKnown RBP9.34□□□□□ -0.91
VCX1YDL128W SIS1P25294 352 aaKnown RBP9.3□□□□□ -0.92
VCX1YDL128W YAP5P40574 245 aa9.3□□□□□ -0.92
VCX1YDL128W MST1P07236 462 aa9.29□□□□□ -0.92
VCX1YDL128W MRM1P25270 412 aa9.27□□□□□ -0.93
VCX1YDL128W NSR1P27476 414 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
VCX1YDL128W YBL029C-AQ3E756 94 aa9.26□□□□□ -0.93
VCX1YDL128W CST9Q06032 482 aa9.21□□□□□ -0.94
VCX1YDL128W PIB1Q06651 286 aa9.18□□□□□ -0.94
VCX1YDL128W MGA2P40578 1113 aa9.17□□□□□ -0.94
VCX1YDL128W WSC3Q12215 556 aa9.17□□□□□ -0.94
VCX1YDL128W GTT3P39996 337 aa9.14□□□□□ -0.95
VCX1YDL128W VNX1P42839 908 aa9.11□□□□□ -0.95
VCX1YDL128W SPP1Q03012 353 aa9.08□□□□□ -0.96
VCX1YDL128W RTG3P38165 486 aa9.04□□□□□ -0.96
VCX1YDL128W YFR006WP43590 535 aa9.01□□□□□ -0.97
VCX1YDL128W VPS29P38759 282 aa9□□□□□ -0.97
VCX1YDL128W YMR1P47147 688 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
VCX1YDL128W DBP1P24784 617 aaKnown RBP8.99□□□□□ -0.97
VCX1YDL128W RCR1P38212 213 aa8.99□□□□□ -0.97
VCX1YDL128W TIF11P38912 153 aaKnown RBP8.95□□□□□ -0.98
VCX1YDL128W STS1P38637 319 aa8.94□□□□□ -0.98
VCX1YDL128W SET4P42948 560 aa8.88□□□□□ -0.99
VCX1YDL128W ULI1P43604 169 aa8.88□□□□□ -0.99
VCX1YDL128W VMA1P17255 1071 aaKnown RBP8.86□□□□□ -0.99
VCX1YDL128W YOL036WQ08206 761 aa8.85□□□□□ -0.99
VCX1YDL128W LDB19Q12502 818 aa8.85□□□□□ -0.99
VCX1YDL128W MSB4Q12317 492 aa8.82□□□□□ -1
VCX1YDL128W FKH1P40466 484 aa8.8□□□□□ -1
VCX1YDL128W IOC2Q12072 812 aa8.8□□□□□ -1
VCX1YDL128W AIR2Q12476 344 aaKnown RBP8.79□□□□□ -1
VCX1YDL128W EAP1P36041 632 aaKnown RBP8.78□□□□□ -1
VCX1YDL128W YJL171CP46992 396 aa8.77□□□□□ -1.01
VCX1YDL128W TRP5P00931 707 aaKnown RBP8.76□□□□□ -1.01
VCX1YDL128W SAM3Q08986 587 aa8.74□□□□□ -1.01
VCX1YDL128W RAM2P29703 316 aa8.7□□□□□ -1.02
VCX1YDL128W RTG1P32607 177 aa8.7□□□□□ -1.02
VCX1YDL128W GYP5Q12344 894 aa8.69□□□□□ -1.02
VCX1YDL128W MIF2P35201 549 aa8.67□□□□□ -1.02
VCX1YDL128W DCW1P36091 449 aa8.66□□□□□ -1.02
VCX1YDL128W SPA2P23201 1466 aaKnown RBP8.64□□□□□ -1.03
VCX1YDL128W MAK11P20484 414 aaKnown RBP8.64□□□□□ -1.03
VCX1YDL128W BMT6Q12291 365 aa8.64□□□□□ -1.03
VCX1YDL128W YNL035CP53962 389 aaKnown RBP8.63□□□□□ -1.03
VCX1YDL128W NCR1Q12200 1170 aa8.63□□□□□ -1.03
VCX1YDL128W HTA1P04911 132 aaKnown RBP8.61□□□□□ -1.03
VCX1YDL128W HTA2P04912 132 aa8.61□□□□□ -1.03
VCX1YDL128W ABP1P15891 592 aaKnown RBP8.59□□□□□ -1.03
VCX1YDL128W SEC61P32915 480 aa8.58□□□□□ -1.04
VCX1YDL128W GRE2Q12068 342 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms