RNA–Protein interactions for RNA: YDL002C

NHP10, Transcript of Non-essential INO80 chromatin remodeling complex subunit, yeastyeast

Gene NHP10, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP10YDL002C MTC1P47018 478 aaKnown RBP16.26■□□□□ 0.19
NHP10YDL002C DRS1P32892 752 aaKnown RBP15.03■□□□□ -0
NHP10YDL002C FAP1P53971 965 aa14.95□□□□□ -0.02
NHP10YDL002C PRY3P47033 881 aa14.04□□□□□ -0.16
NHP10YDL002C PRI1P10363 409 aa13.82□□□□□ -0.2
NHP10YDL002C AAD16Q02895 342 aa13.78□□□□□ -0.2
NHP10YDL002C ISW2Q08773 1120 aa13.56□□□□□ -0.24
NHP10YDL002C RPG1P38249 964 aaKnown RBP13.42□□□□□ -0.26
NHP10YDL002C DIP2Q12220 943 aaPredicted RBP13.24□□□□□ -0.29
NHP10YDL002C YCK3P39962 524 aa13.15□□□□□ -0.3
NHP10YDL002C HAA1Q12753 694 aaKnown RBP13.12□□□□□ -0.31
NHP10YDL002C TSR3Q12094 313 aaKnown RBP13.09□□□□□ -0.31
NHP10YDL002C RSE1Q04693 1361 aaKnown RBP12.86□□□□□ -0.35
NHP10YDL002C AVT3P36062 692 aa12.66□□□□□ -0.38
NHP10YDL002C MRPL32P25348 183 aa12.59□□□□□ -0.39
NHP10YDL002C RPL17AP05740 184 aaKnown RBP12.48□□□□□ -0.41
NHP10YDL002C RPL17BP46990 184 aaKnown RBP12.48□□□□□ -0.41
NHP10YDL002C REB1P21538 810 aa12.46□□□□□ -0.41
NHP10YDL002C BFR2Q06631 534 aaKnown RBP12.41□□□□□ -0.42
NHP10YDL002C YGL015CP33199 130 aa12.12□□□□□ -0.47
NHP10YDL002C CDC27P38042 758 aa11.88□□□□□ -0.51
NHP10YDL002C SPT21P35209 758 aa11.86□□□□□ -0.51
NHP10YDL002C YKR023WP36119 530 aaKnown RBP11.79□□□□□ -0.52
NHP10YDL002C HOP09932 586 aa11.6□□□□□ -0.55
NHP10YDL002C UBP10P53874 792 aaPredicted RBP11.56□□□□□ -0.56
NHP10YDL002C DCD1P06773 312 aa11.55□□□□□ -0.56
NHP10YDL002C MAP2P38174 421 aaKnown RBP11.55□□□□□ -0.56
NHP10YDL002C TFC8Q12308 588 aa11.55□□□□□ -0.56
NHP10YDL002C RIM101P33400 625 aa11.41□□□□□ -0.58
NHP10YDL002C SCY1P53009 804 aa11.3□□□□□ -0.6
NHP10YDL002C BCH2P36122 765 aa11.18□□□□□ -0.62
NHP10YDL002C BUD31P25337 157 aaPredicted RBP11.16□□□□□ -0.62
NHP10YDL002C SLX5P32828 619 aaKnown RBP11.16□□□□□ -0.62
NHP10YDL002C TIF4632P39936 914 aaKnown RBP11.13□□□□□ -0.63
NHP10YDL002C TGL3P40308 642 aa11.05□□□□□ -0.64
NHP10YDL002C OXP1P28273 1286 aa11.02□□□□□ -0.65
NHP10YDL002C PTP3P40048 928 aa10.94□□□□□ -0.66
NHP10YDL002C YIL055CP40523 627 aaKnown RBP10.94□□□□□ -0.66
NHP10YDL002C EPS1P40557 701 aa10.9□□□□□ -0.66
NHP10YDL002C BDF1P35817 686 aa10.85□□□□□ -0.67
NHP10YDL002C UBP9P39967 754 aa10.82□□□□□ -0.68
NHP10YDL002C YAH1Q12184 172 aaKnown RBP10.75□□□□□ -0.69
NHP10YDL002C RSM7P47150 247 aa10.73□□□□□ -0.69
NHP10YDL002C TFA1P36100 482 aa10.72□□□□□ -0.69
NHP10YDL002C BBC1P47068 1157 aa10.7□□□□□ -0.7
NHP10YDL002C SIS1P25294 352 aaKnown RBP10.67□□□□□ -0.7
NHP10YDL002C AI2P03876 854 aa10.65□□□□□ -0.7
NHP10YDL002C YOR238WQ08634 303 aa10.55□□□□□ -0.72
NHP10YDL002C MST1P07236 462 aa10.52□□□□□ -0.73
NHP10YDL002C YLR271WQ06152 274 aa10.49□□□□□ -0.73
NHP10YDL002C NSR1P27476 414 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
NHP10YDL002C YAP5P40574 245 aa10.45□□□□□ -0.74
NHP10YDL002C YBL029C-AQ3E756 94 aa10.45□□□□□ -0.74
NHP10YDL002C PSD2P53037 1138 aaKnown RBP10.35□□□□□ -0.75
NHP10YDL002C SSP1P38871 571 aa10.32□□□□□ -0.76
NHP10YDL002C VNX1P42839 908 aa10.32□□□□□ -0.76
NHP10YDL002C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76 RIP-Chip
NHP10YDL002C WSC3Q12215 556 aa10.3□□□□□ -0.76
NHP10YDL002C MRM1P25270 412 aa10.28□□□□□ -0.76
NHP10YDL002C GTT3P39996 337 aa10.26□□□□□ -0.77
NHP10YDL002C SPP1Q03012 353 aa10.26□□□□□ -0.77
NHP10YDL002C PIB1Q06651 286 aa10.21□□□□□ -0.77
NHP10YDL002C TIF11P38912 153 aaKnown RBP10.13□□□□□ -0.79
NHP10YDL002C CST9Q06032 482 aa10.12□□□□□ -0.79
NHP10YDL002C MGA2P40578 1113 aa10.1□□□□□ -0.79
NHP10YDL002C RTG3P38165 486 aa10.03□□□□□ -0.8
NHP10YDL002C YMR1P47147 688 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
NHP10YDL002C ULI1P43604 169 aa10.01□□□□□ -0.81
NHP10YDL002C VPS29P38759 282 aa10□□□□□ -0.81
NHP10YDL002C DBP1P24784 617 aaKnown RBP9.99□□□□□ -0.81
NHP10YDL002C AIR2Q12476 344 aaKnown RBP9.99□□□□□ -0.81
NHP10YDL002C LDB19Q12502 818 aa9.99□□□□□ -0.81
NHP10YDL002C FKH1P40466 484 aa9.98□□□□□ -0.81
NHP10YDL002C YFR006WP43590 535 aa9.98□□□□□ -0.81
NHP10YDL002C YJL171CP46992 396 aa9.97□□□□□ -0.81
NHP10YDL002C MSB4Q12317 492 aa9.95□□□□□ -0.82
NHP10YDL002C IOC2Q12072 812 aa9.94□□□□□ -0.82
NHP10YDL002C SET4P42948 560 aa9.92□□□□□ -0.82
NHP10YDL002C YOL036WQ08206 761 aa9.92□□□□□ -0.82
NHP10YDL002C EAP1P36041 632 aaKnown RBP9.91□□□□□ -0.82
NHP10YDL002C STS1P38637 319 aa9.91□□□□□ -0.82
NHP10YDL002C RCR1P38212 213 aa9.9□□□□□ -0.82
NHP10YDL002C VMA1P17255 1071 aaKnown RBP9.88□□□□□ -0.83
NHP10YDL002C TRP5P00931 707 aaKnown RBP9.84□□□□□ -0.83
NHP10YDL002C BMT6Q12291 365 aa9.81□□□□□ -0.84
NHP10YDL002C RTG1P32607 177 aa9.8□□□□□ -0.84
NHP10YDL002C SAM3Q08986 587 aa9.8□□□□□ -0.84
NHP10YDL002C NCR1Q12200 1170 aa9.74□□□□□ -0.85
NHP10YDL002C YNL035CP53962 389 aaKnown RBP9.73□□□□□ -0.85
NHP10YDL002C GYP5Q12344 894 aa9.7□□□□□ -0.86
NHP10YDL002C SEC61P32915 480 aa9.69□□□□□ -0.86
NHP10YDL002C ABP1P15891 592 aaKnown RBP9.66□□□□□ -0.86
NHP10YDL002C TFG1P41895 735 aaPredicted RBP9.65□□□□□ -0.86
NHP10YDL002C DCW1P36091 449 aa9.64□□□□□ -0.87
NHP10YDL002C HTA1P04911 132 aaKnown RBP9.62□□□□□ -0.87
NHP10YDL002C HTA2P04912 132 aa9.62□□□□□ -0.87
NHP10YDL002C JIP4Q03361 876 aa9.6□□□□□ -0.87
NHP10YDL002C DAN4P47179 1161 aa9.58□□□□□ -0.88
NHP10YDL002C MIF2P35201 549 aa9.56□□□□□ -0.88
NHP10YDL002C MAK11P20484 414 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms