RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	MTC1	P47018	478 aa	Known RBP	13.78	□□□□□ -0.2
HMRA2	YCR096C	FAP1	P53971	965 aa		13.25	□□□□□ -0.29
HMRA2	YCR096C	PRY3	P47033	881 aa		12.5	□□□□□ -0.41
HMRA2	YCR096C	DRS1	P32892	752 aa	Known RBP	12.11	□□□□□ -0.47
HMRA2	YCR096C	AAD16	Q02895	342 aa		12.07	□□□□□ -0.48
HMRA2	YCR096C	PRI1	P10363	409 aa		12.06	□□□□□ -0.48
HMRA2	YCR096C	YCK3	P39962	524 aa		11.84	□□□□□ -0.51
HMRA2	YCR096C	HAA1	Q12753	694 aa	Known RBP	11.66	□□□□□ -0.54
HMRA2	YCR096C	ISW2	Q08773	1120 aa		11.56	□□□□□ -0.56
HMRA2	YCR096C	RPG1	P38249	964 aa	Known RBP	11.5	□□□□□ -0.57
HMRA2	YCR096C	TSR3	Q12094	313 aa	Known RBP	11.37	□□□□□ -0.59
HMRA2	YCR096C	DIP2	Q12220	943 aa	Predicted RBP	10.9	□□□□□ -0.66
HMRA2	YCR096C	MRPL32	P25348	183 aa		10.89	□□□□□ -0.67
HMRA2	YCR096C	RSE1	Q04693	1361 aa	Known RBP	10.73	□□□□□ -0.69
HMRA2	YCR096C	YGL015C	P33199	130 aa		10.65	□□□□□ -0.7
HMRA2	YCR096C	RPL17A	P05740	184 aa	Known RBP	10.46	□□□□□ -0.73
HMRA2	YCR096C	REB1	P21538	810 aa		10.46	□□□□□ -0.73
HMRA2	YCR096C	RPL17B	P46990	184 aa	Known RBP	10.46	□□□□□ -0.73
HMRA2	YCR096C	AVT3	P36062	692 aa		10.31	□□□□□ -0.76
HMRA2	YCR096C	CDC27	P38042	758 aa		10.25	□□□□□ -0.77
HMRA2	YCR096C	BUD31	P25337	157 aa	Predicted RBP	10.11	□□□□□ -0.79
HMRA2	YCR096C	YKR023W	P36119	530 aa	Known RBP	10.05	□□□□□ -0.8
HMRA2	YCR096C	MAP2	P38174	421 aa	Known RBP	10.01	□□□□□ -0.81
HMRA2	YCR096C	UBP10	P53874	792 aa	Predicted RBP	10.01	□□□□□ -0.81
HMRA2	YCR096C	SPT21	P35209	758 aa		9.97	□□□□□ -0.81
HMRA2	YCR096C	HO	P09932	586 aa		9.84	□□□□□ -0.83
HMRA2	YCR096C	DCD1	P06773	312 aa		9.83	□□□□□ -0.84
HMRA2	YCR096C	TFC8	Q12308	588 aa		9.82	□□□□□ -0.84
HMRA2	YCR096C	BFR2	Q06631	534 aa	Known RBP	9.69	□□□□□ -0.86
HMRA2	YCR096C	SCY1	P53009	804 aa		9.66	□□□□□ -0.86
HMRA2	YCR096C	TIF4632	P39936	914 aa	Known RBP	9.59	□□□□□ -0.87
HMRA2	YCR096C	TGL3	P40308	642 aa		9.58	□□□□□ -0.88
HMRA2	YCR096C	SLX5	P32828	619 aa	Known RBP	9.56	□□□□□ -0.88
HMRA2	YCR096C	SIS1	P25294	352 aa	Known RBP	9.54	□□□□□ -0.88
HMRA2	YCR096C	UBP9	P39967	754 aa		9.49	□□□□□ -0.89
HMRA2	YCR096C	BCH2	P36122	765 aa		9.48	□□□□□ -0.89
HMRA2	YCR096C	RIM101	P33400	625 aa		9.45	□□□□□ -0.9
HMRA2	YCR096C	EPS1	P40557	701 aa		9.18	□□□□□ -0.94
HMRA2	YCR096C	BDF1	P35817	686 aa		9.16	□□□□□ -0.94
HMRA2	YCR096C	OXP1	P28273	1286 aa		9.13	□□□□□ -0.95
HMRA2	YCR096C	MST1	P07236	462 aa		9.11	□□□□□ -0.95
HMRA2	YCR096C	YBL029C-A	Q3E756	94 aa		9.09	□□□□□ -0.95
HMRA2	YCR096C	YOR238W	Q08634	303 aa		9.02	□□□□□ -0.97
HMRA2	YCR096C	PTP3	P40048	928 aa		8.98	□□□□□ -0.97
HMRA2	YCR096C	VNX1	P42839	908 aa		8.95	□□□□□ -0.98
HMRA2	YCR096C	YIL055C	P40523	627 aa	Known RBP	8.94	□□□□□ -0.98
HMRA2	YCR096C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	8.93	□□□□□ -0.98	not detected
HMRA2	YCR096C	SPP1	Q03012	353 aa		8.86	□□□□□ -0.99
HMRA2	YCR096C	YAP5	P40574	245 aa		8.85	□□□□□ -0.99
HMRA2	YCR096C	BBC1	P47068	1157 aa		8.84	□□□□□ -0.99
HMRA2	YCR096C	RSM7	P47150	247 aa		8.83	□□□□□ -1
HMRA2	YCR096C	WSC3	Q12215	556 aa		8.83	□□□□□ -1
HMRA2	YCR096C	AI2	P03876	854 aa		8.82	□□□□□ -1
HMRA2	YCR096C	AIR2	Q12476	344 aa	Known RBP	8.76	□□□□□ -1.01
HMRA2	YCR096C	YAH1	Q12184	172 aa	Known RBP	8.73	□□□□□ -1.01
HMRA2	YCR096C	TIF11	P38912	153 aa	Known RBP	8.72	□□□□□ -1.01
HMRA2	YCR096C	FKH1	P40466	484 aa		8.71	□□□□□ -1.02
HMRA2	YCR096C	YJL171C	P46992	396 aa		8.68	□□□□□ -1.02
HMRA2	YCR096C	GTT3	P39996	337 aa		8.66	□□□□□ -1.02
HMRA2	YCR096C	LDB19	Q12502	818 aa		8.6	□□□□□ -1.03
HMRA2	YCR096C	PIB1	Q06651	286 aa		8.59	□□□□□ -1.03
HMRA2	YCR096C	ULI1	P43604	169 aa		8.58	□□□□□ -1.04
HMRA2	YCR096C	YLR271W	Q06152	274 aa		8.57	□□□□□ -1.04
HMRA2	YCR096C	IOC2	Q12072	812 aa		8.57	□□□□□ -1.04
HMRA2	YCR096C	PSD2	P53037	1138 aa	Known RBP	8.53	□□□□□ -1.04
HMRA2	YCR096C	BMT6	Q12291	365 aa		8.52	□□□□□ -1.05
HMRA2	YCR096C	MRM1	P25270	412 aa		8.47	□□□□□ -1.05
HMRA2	YCR096C	MSB4	Q12317	492 aa		8.43	□□□□□ -1.06
HMRA2	YCR096C	EAP1	P36041	632 aa	Known RBP	8.4	□□□□□ -1.06
HMRA2	YCR096C	RTG1	P32607	177 aa		8.39	□□□□□ -1.07
HMRA2	YCR096C	SET4	P42948	560 aa		8.38	□□□□□ -1.07
HMRA2	YCR096C	YOL036W	Q08206	761 aa		8.38	□□□□□ -1.07
HMRA2	YCR096C	TRP5	P00931	707 aa	Known RBP	8.36	□□□□□ -1.07
HMRA2	YCR096C	NCR1	Q12200	1170 aa		8.34	□□□□□ -1.07
HMRA2	YCR096C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	8.31	□□□□□ -1.08	not detected
HMRA2	YCR096C	DBP1	P24784	617 aa	Known RBP	8.3	□□□□□ -1.08
HMRA2	YCR096C	VPS29	P38759	282 aa		8.3	□□□□□ -1.08
HMRA2	YCR096C	YFR006W	P43590	535 aa		8.28	□□□□□ -1.08
HMRA2	YCR096C	YNL035C	P53962	389 aa	Known RBP	8.28	□□□□□ -1.08
HMRA2	YCR096C	VMA1	P17255	1071 aa	Known RBP	8.26	□□□□□ -1.09
HMRA2	YCR096C	SEC61	P32915	480 aa		8.26	□□□□□ -1.09
HMRA2	YCR096C	TFA1	P36100	482 aa		8.26	□□□□□ -1.09
HMRA2	YCR096C	STS1	P38637	319 aa		8.24	□□□□□ -1.09
HMRA2	YCR096C	CST9	Q06032	482 aa		8.23	□□□□□ -1.09
HMRA2	YCR096C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	8.23	□□□□□ -1.09	not detected
HMRA2	YCR096C	SSP1	P38871	571 aa		8.22	□□□□□ -1.09
HMRA2	YCR096C	SAM3	Q08986	587 aa		8.22	□□□□□ -1.09
HMRA2	YCR096C	RTG3	P38165	486 aa		8.21	□□□□□ -1.1
HMRA2	YCR096C	DAN4	P47179	1161 aa		8.16	□□□□□ -1.1
HMRA2	YCR096C	SAP30	P38429	201 aa		8.14	□□□□□ -1.11
HMRA2	YCR096C	TFG1	P41895	735 aa	Predicted RBP	8.14	□□□□□ -1.11
HMRA2	YCR096C	RCR1	P38212	213 aa		8.13	□□□□□ -1.11
HMRA2	YCR096C	MGA2	P40578	1113 aa		8.12	□□□□□ -1.11
HMRA2	YCR096C	JIP4	Q03361	876 aa		8.09	□□□□□ -1.11
HMRA2	YCR096C	BCK2	P33306	851 aa		8.08	□□□□□ -1.12
HMRA2	YCR096C	YDL129W	Q07555	291 aa		8.07	□□□□□ -1.12
HMRA2	YCR096C	GYP5	Q12344	894 aa		8.07	□□□□□ -1.12
HMRA2	YCR096C	CHL1	P22516	861 aa	Predicted RBP	8.05	□□□□□ -1.12
HMRA2	YCR096C	ABP1	P15891	592 aa	Known RBP	8.03	□□□□□ -1.12
HMRA2	YCR096C	DCW1	P36091	449 aa		8.03	□□□□□ -1.12

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