RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeastyeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSA4YCR072C MTC1P47018 478 aaKnown RBP15.32■□□□□ 0.04
RSA4YCR072C DRS1P32892 752 aaKnown RBP14.31□□□□□ -0.12
RSA4YCR072C FAP1P53971 965 aa13.94□□□□□ -0.18
RSA4YCR072C PRY3P47033 881 aa13.06□□□□□ -0.32
RSA4YCR072C PRI1P10363 409 aa12.93□□□□□ -0.34
RSA4YCR072C AAD16Q02895 342 aa12.88□□□□□ -0.35
RSA4YCR072C ISW2Q08773 1120 aa12.77□□□□□ -0.37
RSA4YCR072C RPG1P38249 964 aaKnown RBP12.59□□□□□ -0.39
RSA4YCR072C DIP2Q12220 943 aaPredicted RBP12.54□□□□□ -0.4
RSA4YCR072C TSR3Q12094 313 aaKnown RBP12.25□□□□□ -0.45
RSA4YCR072C HAA1Q12753 694 aaKnown RBP12.23□□□□□ -0.45
RSA4YCR072C YCK3P39962 524 aa12.18□□□□□ -0.46
RSA4YCR072C RSE1Q04693 1361 aaKnown RBP12.16□□□□□ -0.46
RSA4YCR072C AVT3P36062 692 aa12.02□□□□□ -0.48
RSA4YCR072C BFR2Q06631 534 aaKnown RBP11.89□□□□□ -0.51
RSA4YCR072C MRPL32P25348 183 aa11.8□□□□□ -0.52
RSA4YCR072C RPL17AP05740 184 aaKnown RBP11.76□□□□□ -0.53
RSA4YCR072C REB1P21538 810 aa11.76□□□□□ -0.53
RSA4YCR072C RPL17BP46990 184 aaKnown RBP11.76□□□□□ -0.53
RSA4YCR072C YGL015CP33199 130 aa11.31□□□□□ -0.6
RSA4YCR072C SPT21P35209 758 aa11.19□□□□□ -0.62
RSA4YCR072C CDC27P38042 758 aa11.14□□□□□ -0.63
RSA4YCR072C YKR023WP36119 530 aaKnown RBP11.08□□□□□ -0.64
RSA4YCR072C HOP09932 586 aa10.89□□□□□ -0.67
RSA4YCR072C UBP10P53874 792 aaPredicted RBP10.86□□□□□ -0.67
RSA4YCR072C TFC8Q12308 588 aa10.86□□□□□ -0.67
RSA4YCR072C DCD1P06773 312 aa10.85□□□□□ -0.67
RSA4YCR072C MAP2P38174 421 aaKnown RBP10.81□□□□□ -0.68
RSA4YCR072C RIM101P33400 625 aa10.79□□□□□ -0.68
RSA4YCR072C TFA1P36100 482 aa10.65□□□□□ -0.7
RSA4YCR072C SCY1P53009 804 aa10.62□□□□□ -0.71
RSA4YCR072C BCH2P36122 765 aa10.52□□□□□ -0.73
RSA4YCR072C SLX5P32828 619 aaKnown RBP10.49□□□□□ -0.73
RSA4YCR072C TIF4632P39936 914 aaKnown RBP10.47□□□□□ -0.73
RSA4YCR072C OXP1P28273 1286 aa10.42□□□□□ -0.74
RSA4YCR072C PTP3P40048 928 aa10.38□□□□□ -0.75
RSA4YCR072C YIL055CP40523 627 aaKnown RBP10.38□□□□□ -0.75
RSA4YCR072C TGL3P40308 642 aa10.36□□□□□ -0.75
RSA4YCR072C BUD31P25337 157 aaPredicted RBP10.35□□□□□ -0.75
RSA4YCR072C EPS1P40557 701 aa10.27□□□□□ -0.77
RSA4YCR072C BDF1P35817 686 aa10.22□□□□□ -0.77
RSA4YCR072C YAH1Q12184 172 aaKnown RBP10.19□□□□□ -0.78
RSA4YCR072C RQC2Q12532 1038 aaKnown RBP10.19□□□□□ -0.78
RSA4YCR072C RSM7P47150 247 aa10.17□□□□□ -0.78
RSA4YCR072C BBC1P47068 1157 aa10.14□□□□□ -0.79
RSA4YCR072C UBP9P39967 754 aa10.12□□□□□ -0.79
RSA4YCR072C AI2P03876 854 aa10.08□□□□□ -0.8
RSA4YCR072C TAF7Q05021 590 aa10.02□□□□□ -0.81
RSA4YCR072C YLR271WQ06152 274 aa9.96□□□□□ -0.82
RSA4YCR072C SIS1P25294 352 aaKnown RBP9.92□□□□□ -0.82
RSA4YCR072C YOR238WQ08634 303 aa9.92□□□□□ -0.82
RSA4YCR072C NSR1P27476 414 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
RSA4YCR072C MST1P07236 462 aa9.87□□□□□ -0.83
RSA4YCR072C SSP1P38871 571 aa9.86□□□□□ -0.83
RSA4YCR072C YAP5P40574 245 aa9.86□□□□□ -0.83
RSA4YCR072C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.85□□□□□ -0.83not detected
RSA4YCR072C PSD2P53037 1138 aaKnown RBP9.81□□□□□ -0.84
RSA4YCR072C YBL029C-AQ3E756 94 aa9.79□□□□□ -0.84
RSA4YCR072C MRM1P25270 412 aa9.72□□□□□ -0.85
RSA4YCR072C GTT3P39996 337 aa9.69□□□□□ -0.86
RSA4YCR072C WSC3Q12215 556 aa9.66□□□□□ -0.86
RSA4YCR072C VNX1P42839 908 aa9.66□□□□□ -0.86
RSA4YCR072C SPP1Q03012 353 aa9.63□□□□□ -0.87
RSA4YCR072C MGA2P40578 1113 aa9.62□□□□□ -0.87
RSA4YCR072C PIB1Q06651 286 aa9.61□□□□□ -0.87
RSA4YCR072C CST9Q06032 482 aa9.61□□□□□ -0.87
RSA4YCR072C RTG3P38165 486 aa9.51□□□□□ -0.89
RSA4YCR072C TIF11P38912 153 aaKnown RBP9.51□□□□□ -0.89
RSA4YCR072C YMR1P47147 688 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
RSA4YCR072C DBP1P24784 617 aaKnown RBP9.45□□□□□ -0.9
RSA4YCR072C VPS29P38759 282 aa9.45□□□□□ -0.9
RSA4YCR072C YFR006WP43590 535 aa9.42□□□□□ -0.9
RSA4YCR072C ULI1P43604 169 aa9.41□□□□□ -0.9
RSA4YCR072C MSB4Q12317 492 aa9.39□□□□□ -0.91
RSA4YCR072C RCR1P38212 213 aa9.38□□□□□ -0.91
RSA4YCR072C STS1P38637 319 aa9.37□□□□□ -0.91
RSA4YCR072C FKH1P40466 484 aa9.36□□□□□ -0.91
RSA4YCR072C LDB19Q12502 818 aa9.36□□□□□ -0.91
RSA4YCR072C EAP1P36041 632 aaKnown RBP9.36□□□□□ -0.91
RSA4YCR072C SET4P42948 560 aa9.36□□□□□ -0.91
RSA4YCR072C YOL036WQ08206 761 aa9.36□□□□□ -0.91
RSA4YCR072C YJL171CP46992 396 aa9.35□□□□□ -0.91
RSA4YCR072C VMA1P17255 1071 aaKnown RBP9.34□□□□□ -0.91
RSA4YCR072C DMA1P38823 416 aa9.33□□□□□ -0.92
RSA4YCR072C AIR2Q12476 344 aaKnown RBP9.33□□□□□ -0.92
RSA4YCR072C IOC2Q12072 812 aa9.32□□□□□ -0.92
RSA4YCR072C SAM3Q08986 587 aa9.26□□□□□ -0.93
RSA4YCR072C TRP5P00931 707 aaKnown RBP9.25□□□□□ -0.93
RSA4YCR072C RTG1P32607 177 aa9.21□□□□□ -0.93
RSA4YCR072C BMT6Q12291 365 aa9.2□□□□□ -0.94
RSA4YCR072C GYP5Q12344 894 aa9.18□□□□□ -0.94
RSA4YCR072C ABP1P15891 592 aaKnown RBP9.17□□□□□ -0.94
RSA4YCR072C YNL035CP53962 389 aaKnown RBP9.17□□□□□ -0.94
RSA4YCR072C NCR1Q12200 1170 aa9.15□□□□□ -0.95
RSA4YCR072C SEC61P32915 480 aa9.12□□□□□ -0.95
RSA4YCR072C HTA1P04911 132 aaKnown RBP9.1□□□□□ -0.95
RSA4YCR072C HTA2P04912 132 aa9.1□□□□□ -0.95
RSA4YCR072C DCW1P36091 449 aa9.1□□□□□ -0.95
RSA4YCR072C TFG1P41895 735 aaPredicted RBP9.1□□□□□ -0.95
RSA4YCR072C LEO1P38439 464 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms