RNA–Protein interactions for RNA: YCR044C

PER1, Transcript of Protein of the endoplasmic reticulum, yeastyeast

Gene PER1, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PER1YCR044C MTC1P47018 478 aaKnown RBP13.06□□□□□ -0.32
PER1YCR044C FAP1P53971 965 aa12.59□□□□□ -0.39
PER1YCR044C PRY3P47033 881 aa11.87□□□□□ -0.51
PER1YCR044C AAD16Q02895 342 aa11.45□□□□□ -0.58
PER1YCR044C DRS1P32892 752 aaKnown RBP11.44□□□□□ -0.58
PER1YCR044C PRI1P10363 409 aa11.43□□□□□ -0.58
PER1YCR044C YCK3P39962 524 aa11.26□□□□□ -0.61
PER1YCR044C HAA1Q12753 694 aaKnown RBP11.07□□□□□ -0.64
PER1YCR044C ISW2Q08773 1120 aa10.95□□□□□ -0.66
PER1YCR044C RPG1P38249 964 aaKnown RBP10.9□□□□□ -0.66
PER1YCR044C TSR3Q12094 313 aaKnown RBP10.78□□□□□ -0.68
PER1YCR044C MRPL32P25348 183 aa10.32□□□□□ -0.76
PER1YCR044C DIP2Q12220 943 aaPredicted RBP10.29□□□□□ -0.76
PER1YCR044C RSE1Q04693 1361 aaKnown RBP10.14□□□□□ -0.79
PER1YCR044C YGL015CP33199 130 aa10.1□□□□□ -0.79
PER1YCR044C RPL17AP05740 184 aaKnown RBP9.9□□□□□ -0.82
PER1YCR044C REB1P21538 810 aa9.9□□□□□ -0.82
PER1YCR044C RPL17BP46990 184 aaKnown RBP9.9□□□□□ -0.82
PER1YCR044C AVT3P36062 692 aa9.73□□□□□ -0.85
PER1YCR044C CDC27P38042 758 aa9.73□□□□□ -0.85
PER1YCR044C BUD31P25337 157 aaPredicted RBP9.61□□□□□ -0.87
PER1YCR044C YKR023WP36119 530 aaKnown RBP9.51□□□□□ -0.89
PER1YCR044C MAP2P38174 421 aaKnown RBP9.5□□□□□ -0.89
PER1YCR044C UBP10P53874 792 aaPredicted RBP9.5□□□□□ -0.89
PER1YCR044C SPT21P35209 758 aa9.44□□□□□ -0.9
PER1YCR044C HOP09932 586 aa9.32□□□□□ -0.92
PER1YCR044C DCD1P06773 312 aa9.31□□□□□ -0.92
PER1YCR044C TFC8Q12308 588 aa9.3□□□□□ -0.92
PER1YCR044C SCY1P53009 804 aa9.16□□□□□ -0.94
PER1YCR044C BFR2Q06631 534 aaKnown RBP9.14□□□□□ -0.95
PER1YCR044C TIF4632P39936 914 aaKnown RBP9.09□□□□□ -0.95
PER1YCR044C SLX5P32828 619 aaKnown RBP9.07□□□□□ -0.96
PER1YCR044C TGL3P40308 642 aa9.07□□□□□ -0.96
PER1YCR044C SIS1P25294 352 aaKnown RBP9.06□□□□□ -0.96
PER1YCR044C UBP9P39967 754 aa9□□□□□ -0.97
PER1YCR044C BCH2P36122 765 aa8.97□□□□□ -0.97
PER1YCR044C RIM101P33400 625 aa8.93□□□□□ -0.98
PER1YCR044C EPS1P40557 701 aa8.69□□□□□ -1.02
PER1YCR044C BDF1P35817 686 aa8.67□□□□□ -1.02
PER1YCR044C MST1P07236 462 aa8.63□□□□□ -1.03
PER1YCR044C OXP1P28273 1286 aa8.63□□□□□ -1.03
PER1YCR044C YBL029C-AQ3E756 94 aa8.62□□□□□ -1.03
PER1YCR044C YOR238WQ08634 303 aa8.54□□□□□ -1.04
PER1YCR044C VNX1P42839 908 aa8.49□□□□□ -1.05
PER1YCR044C PTP3P40048 928 aa8.47□□□□□ -1.05
PER1YCR044C NSR1P27476 414 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
PER1YCR044C YIL055CP40523 627 aaKnown RBP8.44□□□□□ -1.06
PER1YCR044C SPP1Q03012 353 aa8.39□□□□□ -1.07
PER1YCR044C YAP5P40574 245 aa8.37□□□□□ -1.07
PER1YCR044C WSC3Q12215 556 aa8.36□□□□□ -1.07
PER1YCR044C BBC1P47068 1157 aa8.35□□□□□ -1.07
PER1YCR044C RSM7P47150 247 aa8.35□□□□□ -1.07
PER1YCR044C AI2P03876 854 aa8.33□□□□□ -1.08
PER1YCR044C AIR2Q12476 344 aaKnown RBP8.31□□□□□ -1.08
PER1YCR044C TIF11P38912 153 aaKnown RBP8.27□□□□□ -1.09
PER1YCR044C FKH1P40466 484 aa8.27□□□□□ -1.09
PER1YCR044C YAH1Q12184 172 aaKnown RBP8.25□□□□□ -1.09
PER1YCR044C YJL171CP46992 396 aa8.22□□□□□ -1.09
PER1YCR044C GTT3P39996 337 aa8.2□□□□□ -1.1
PER1YCR044C LDB19Q12502 818 aa8.16□□□□□ -1.1
PER1YCR044C PIB1Q06651 286 aa8.13□□□□□ -1.11
PER1YCR044C IOC2Q12072 812 aa8.13□□□□□ -1.11
PER1YCR044C ULI1P43604 169 aa8.12□□□□□ -1.11
PER1YCR044C YLR271WQ06152 274 aa8.09□□□□□ -1.11
PER1YCR044C BMT6Q12291 365 aa8.07□□□□□ -1.12
PER1YCR044C PSD2P53037 1138 aaKnown RBP8.05□□□□□ -1.12
PER1YCR044C MRM1P25270 412 aa8□□□□□ -1.13
PER1YCR044C MSB4Q12317 492 aa7.99□□□□□ -1.13
PER1YCR044C EAP1P36041 632 aaKnown RBP7.94□□□□□ -1.14
PER1YCR044C SET4P42948 560 aa7.94□□□□□ -1.14
PER1YCR044C YOL036WQ08206 761 aa7.94□□□□□ -1.14
PER1YCR044C RTG1P32607 177 aa7.93□□□□□ -1.14
PER1YCR044C TRP5P00931 707 aaKnown RBP7.92□□□□□ -1.14
PER1YCR044C NCR1Q12200 1170 aa7.89□□□□□ -1.15
PER1YCR044C DBP1P24784 617 aaKnown RBP7.85□□□□□ -1.15
PER1YCR044C VPS29P38759 282 aa7.85□□□□□ -1.15
PER1YCR044C YMR1P47147 688 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
PER1YCR044C YNL035CP53962 389 aaKnown RBP7.84□□□□□ -1.15
PER1YCR044C YFR006WP43590 535 aa7.83□□□□□ -1.16
PER1YCR044C SEC61P32915 480 aa7.82□□□□□ -1.16
PER1YCR044C VMA1P17255 1071 aaKnown RBP7.81□□□□□ -1.16
PER1YCR044C STS1P38637 319 aa7.8□□□□□ -1.16
PER1YCR044C CST9Q06032 482 aa7.78□□□□□ -1.16
PER1YCR044C SAM3Q08986 587 aa7.78□□□□□ -1.16
PER1YCR044C SSP1P38871 571 aa7.77□□□□□ -1.17
PER1YCR044C TFA1P36100 482 aa7.76□□□□□ -1.17
PER1YCR044C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
PER1YCR044C RTG3P38165 486 aa7.75□□□□□ -1.17
PER1YCR044C SAP30P38429 201 aa7.71□□□□□ -1.18
PER1YCR044C DAN4P47179 1161 aa7.71□□□□□ -1.18
PER1YCR044C TFG1P41895 735 aaPredicted RBP7.7□□□□□ -1.18
PER1YCR044C RCR1P38212 213 aa7.68□□□□□ -1.18
PER1YCR044C BCK2P33306 851 aa7.67□□□□□ -1.18
PER1YCR044C MGA2P40578 1113 aa7.66□□□□□ -1.18
PER1YCR044C JIP4Q03361 876 aa7.66□□□□□ -1.18
PER1YCR044C YDL129WQ07555 291 aa7.65□□□□□ -1.18
PER1YCR044C CHL1P22516 861 aaPredicted RBP7.63□□□□□ -1.19
PER1YCR044C GYP5Q12344 894 aa7.63□□□□□ -1.19
PER1YCR044C ABP1P15891 592 aaKnown RBP7.6□□□□□ -1.19
PER1YCR044C HTA1P04911 132 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms