RNA–Protein interactions for RNA: YCR039C

MATALPHA2, Transcript of Homeobox-domain protein, yeastyeast

Gene MATALPHA2, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA2YCR039C MTC1P47018 478 aaKnown RBP15.69■□□□□ 0.1
MATALPHA2YCR039C DRS1P32892 752 aaKnown RBP14.46□□□□□ -0.09
MATALPHA2YCR039C FAP1P53971 965 aa14.36□□□□□ -0.11
MATALPHA2YCR039C PRY3P47033 881 aa13.48□□□□□ -0.25
MATALPHA2YCR039C PRI1P10363 409 aa13.33□□□□□ -0.28
MATALPHA2YCR039C AAD16Q02895 342 aa13.28□□□□□ -0.28
MATALPHA2YCR039C ISW2Q08773 1120 aa13.08□□□□□ -0.32
MATALPHA2YCR039C RPG1P38249 964 aaKnown RBP12.91□□□□□ -0.34
MATALPHA2YCR039C DIP2Q12220 943 aaPredicted RBP12.75□□□□□ -0.37
MATALPHA2YCR039C YCK3P39962 524 aa12.66□□□□□ -0.38
MATALPHA2YCR039C HAA1Q12753 694 aaKnown RBP12.66□□□□□ -0.38
MATALPHA2YCR039C TSR3Q12094 313 aaKnown RBP12.57□□□□□ -0.4
MATALPHA2YCR039C RSE1Q04693 1361 aaKnown RBP12.39□□□□□ -0.43
MATALPHA2YCR039C AVT3P36062 692 aa12.21□□□□□ -0.45
MATALPHA2YCR039C MRPL32P25348 183 aa12.12□□□□□ -0.47
MATALPHA2YCR039C RPL17AP05740 184 aaKnown RBP11.99□□□□□ -0.49
MATALPHA2YCR039C RPL17BP46990 184 aaKnown RBP11.99□□□□□ -0.49
MATALPHA2YCR039C REB1P21538 810 aa11.98□□□□□ -0.49
MATALPHA2YCR039C BFR2Q06631 534 aaKnown RBP11.93□□□□□ -0.5
MATALPHA2YCR039C YGL015CP33199 130 aa11.68□□□□□ -0.54
MATALPHA2YCR039C SPT21P35209 758 aa11.44□□□□□ -0.58
MATALPHA2YCR039C CDC27P38042 758 aa11.43□□□□□ -0.58
MATALPHA2YCR039C YKR023WP36119 530 aaKnown RBP11.36□□□□□ -0.59
MATALPHA2YCR039C UBP10P53874 792 aaPredicted RBP11.19□□□□□ -0.62
MATALPHA2YCR039C TFC8Q12308 588 aa11.14□□□□□ -0.63
MATALPHA2YCR039C HOP09932 586 aa11.13□□□□□ -0.63
MATALPHA2YCR039C MAP2P38174 421 aaKnown RBP11.11□□□□□ -0.63
MATALPHA2YCR039C DCD1P06773 312 aa11.07□□□□□ -0.64
MATALPHA2YCR039C RIM101P33400 625 aa11□□□□□ -0.65
MATALPHA2YCR039C SCY1P53009 804 aa10.87□□□□□ -0.67
MATALPHA2YCR039C BUD31P25337 157 aaPredicted RBP10.77□□□□□ -0.69
MATALPHA2YCR039C BCH2P36122 765 aa10.77□□□□□ -0.69
MATALPHA2YCR039C SLX5P32828 619 aaKnown RBP10.76□□□□□ -0.69
MATALPHA2YCR039C TIF4632P39936 914 aaKnown RBP10.76□□□□□ -0.69
MATALPHA2YCR039C TGL3P40308 642 aa10.68□□□□□ -0.7
MATALPHA2YCR039C OXP1P28273 1286 aa10.61□□□□□ -0.71
MATALPHA2YCR039C YIL055CP40523 627 aaKnown RBP10.52□□□□□ -0.73
MATALPHA2YCR039C PTP3P40048 928 aa10.51□□□□□ -0.73
MATALPHA2YCR039C EPS1P40557 701 aa10.49□□□□□ -0.73
MATALPHA2YCR039C BDF1P35817 686 aa10.45□□□□□ -0.74
MATALPHA2YCR039C UBP9P39967 754 aa10.44□□□□□ -0.74
MATALPHA2YCR039C TFA1P36100 482 aa10.39□□□□□ -0.75
MATALPHA2YCR039C RSM7P47150 247 aa10.34□□□□□ -0.75
MATALPHA2YCR039C BBC1P47068 1157 aa10.32□□□□□ -0.76
MATALPHA2YCR039C YAH1Q12184 172 aaKnown RBP10.3□□□□□ -0.76
MATALPHA2YCR039C AI2P03876 854 aa10.26□□□□□ -0.77
MATALPHA2YCR039C SIS1P25294 352 aaKnown RBP10.26□□□□□ -0.77
MATALPHA2YCR039C MST1P07236 462 aa10.19□□□□□ -0.78
MATALPHA2YCR039C YOR238WQ08634 303 aa10.18□□□□□ -0.78
MATALPHA2YCR039C NSR1P27476 414 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
MATALPHA2YCR039C YLR271WQ06152 274 aa10.11□□□□□ -0.79
MATALPHA2YCR039C YAP5P40574 245 aa10.09□□□□□ -0.79
MATALPHA2YCR039C YBL029C-AQ3E756 94 aa10.06□□□□□ -0.8
MATALPHA2YCR039C PSD2P53037 1138 aaKnown RBP10□□□□□ -0.81
MATALPHA2YCR039C SSP1P38871 571 aa9.96□□□□□ -0.82
MATALPHA2YCR039C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
MATALPHA2YCR039C VNX1P42839 908 aa9.95□□□□□ -0.82
MATALPHA2YCR039C WSC3Q12215 556 aa9.89□□□□□ -0.83
MATALPHA2YCR039C MRM1P25270 412 aa9.88□□□□□ -0.83
MATALPHA2YCR039C GTT3P39996 337 aa9.88□□□□□ -0.83
MATALPHA2YCR039C SPP1Q03012 353 aa9.88□□□□□ -0.83
MATALPHA2YCR039C PIB1Q06651 286 aa9.78□□□□□ -0.84
MATALPHA2YCR039C TIF11P38912 153 aaKnown RBP9.77□□□□□ -0.85
MATALPHA2YCR039C MGA2P40578 1113 aa9.75□□□□□ -0.85
MATALPHA2YCR039C CST9Q06032 482 aa9.73□□□□□ -0.85
MATALPHA2YCR039C RTG3P38165 486 aa9.67□□□□□ -0.86
MATALPHA2YCR039C YMR1P47147 688 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
MATALPHA2YCR039C FKH1P40466 484 aa9.66□□□□□ -0.86
MATALPHA2YCR039C ULI1P43604 169 aa9.65□□□□□ -0.86
MATALPHA2YCR039C VPS29P38759 282 aa9.64□□□□□ -0.87
MATALPHA2YCR039C MSB4Q12317 492 aa9.64□□□□□ -0.87
MATALPHA2YCR039C AIR2Q12476 344 aaKnown RBP9.64□□□□□ -0.87
MATALPHA2YCR039C LDB19Q12502 818 aa9.63□□□□□ -0.87
MATALPHA2YCR039C DBP1P24784 617 aaKnown RBP9.62□□□□□ -0.87
MATALPHA2YCR039C YJL171CP46992 396 aa9.61□□□□□ -0.87
MATALPHA2YCR039C IOC2Q12072 812 aa9.6□□□□□ -0.87
MATALPHA2YCR039C EAP1P36041 632 aaKnown RBP9.59□□□□□ -0.87
MATALPHA2YCR039C YFR006WP43590 535 aa9.57□□□□□ -0.88
MATALPHA2YCR039C YOL036WQ08206 761 aa9.56□□□□□ -0.88
MATALPHA2YCR039C STS1P38637 319 aa9.55□□□□□ -0.88
MATALPHA2YCR039C SET4P42948 560 aa9.55□□□□□ -0.88
MATALPHA2YCR039C VMA1P17255 1071 aaKnown RBP9.53□□□□□ -0.88
MATALPHA2YCR039C RCR1P38212 213 aa9.52□□□□□ -0.89
MATALPHA2YCR039C SAM3Q08986 587 aa9.48□□□□□ -0.89
MATALPHA2YCR039C TRP5P00931 707 aaKnown RBP9.47□□□□□ -0.89
MATALPHA2YCR039C BMT6Q12291 365 aa9.47□□□□□ -0.89
MATALPHA2YCR039C RTG1P32607 177 aa9.44□□□□□ -0.9
MATALPHA2YCR039C YNL035CP53962 389 aaKnown RBP9.41□□□□□ -0.9
MATALPHA2YCR039C NCR1Q12200 1170 aa9.39□□□□□ -0.91
MATALPHA2YCR039C ABP1P15891 592 aaKnown RBP9.38□□□□□ -0.91
MATALPHA2YCR039C SEC61P32915 480 aa9.38□□□□□ -0.91
MATALPHA2YCR039C GYP5Q12344 894 aa9.35□□□□□ -0.91
MATALPHA2YCR039C TFG1P41895 735 aaPredicted RBP9.31□□□□□ -0.92
MATALPHA2YCR039C JIP4Q03361 876 aa9.3□□□□□ -0.92
MATALPHA2YCR039C HTA1P04911 132 aaKnown RBP9.29□□□□□ -0.92
MATALPHA2YCR039C HTA2P04912 132 aa9.29□□□□□ -0.92
MATALPHA2YCR039C DCW1P36091 449 aa9.26□□□□□ -0.93
MATALPHA2YCR039C DAN4P47179 1161 aa9.26□□□□□ -0.93
MATALPHA2YCR039C MAK11P20484 414 aaKnown RBP9.23□□□□□ -0.93
MATALPHA2YCR039C YEL023CP39992 682 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms