RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A MTC1P47018 478 aaKnown RBP12.94□□□□□ -0.34
RIM1YCR028C-A FAP1P53971 965 aa12.93□□□□□ -0.34
RIM1YCR028C-A PRY3P47033 881 aa12.21□□□□□ -0.45
RIM1YCR028C-A DRS1P32892 752 aaKnown RBP12.09□□□□□ -0.47
RIM1YCR028C-A AAD16Q02895 342 aa11.56□□□□□ -0.56
RIM1YCR028C-A PRI1P10363 409 aa11.5□□□□□ -0.57
RIM1YCR028C-A YCK3P39962 524 aa11.47□□□□□ -0.57
RIM1YCR028C-A HAA1Q12753 694 aaKnown RBP11.25□□□□□ -0.61
RIM1YCR028C-A ISW2Q08773 1120 aa10.94□□□□□ -0.66
RIM1YCR028C-A RPG1P38249 964 aaKnown RBP10.93□□□□□ -0.66
RIM1YCR028C-A TSR3Q12094 313 aaKnown RBP10.91□□□□□ -0.66
RIM1YCR028C-A MRPL32P25348 183 aa10.4□□□□□ -0.74
RIM1YCR028C-A DIP2Q12220 943 aaPredicted RBP10.38□□□□□ -0.75
RIM1YCR028C-A BFR2Q06631 534 aaKnown RBP10.36□□□□□ -0.75
RIM1YCR028C-A YGL015CP33199 130 aa10.22□□□□□ -0.77
RIM1YCR028C-A AVT3P36062 692 aa10.15□□□□□ -0.78
RIM1YCR028C-A RSE1Q04693 1361 aaKnown RBP10.02□□□□□ -0.8
RIM1YCR028C-A REB1P21538 810 aa9.88□□□□□ -0.83
RIM1YCR028C-A RPL17AP05740 184 aaKnown RBP9.83□□□□□ -0.84
RIM1YCR028C-A BUD31P25337 157 aaPredicted RBP9.83□□□□□ -0.84
RIM1YCR028C-A RPL17BP46990 184 aaKnown RBP9.83□□□□□ -0.84
RIM1YCR028C-A CDC27P38042 758 aa9.75□□□□□ -0.85
RIM1YCR028C-A MAP2P38174 421 aaKnown RBP9.57□□□□□ -0.88
RIM1YCR028C-A TFA1P36100 482 aa9.56□□□□□ -0.88
RIM1YCR028C-A UBP10P53874 792 aaPredicted RBP9.47□□□□□ -0.89
RIM1YCR028C-A YKR023WP36119 530 aaKnown RBP9.44□□□□□ -0.9
RIM1YCR028C-A DCD1P06773 312 aa9.36□□□□□ -0.91
RIM1YCR028C-A HOP09932 586 aa9.32□□□□□ -0.92
RIM1YCR028C-A SIS1P25294 352 aaKnown RBP9.31□□□□□ -0.92
RIM1YCR028C-A SPT21P35209 758 aa9.27□□□□□ -0.93
RIM1YCR028C-A TFC8Q12308 588 aa9.23□□□□□ -0.93
RIM1YCR028C-A SCY1P53009 804 aa9.19□□□□□ -0.94
RIM1YCR028C-A TIF4632P39936 914 aaKnown RBP9.12□□□□□ -0.95
RIM1YCR028C-A UBP9P39967 754 aa9.12□□□□□ -0.95
RIM1YCR028C-A SLX5P32828 619 aaKnown RBP9.07□□□□□ -0.96
RIM1YCR028C-A TGL3P40308 642 aa9.07□□□□□ -0.96
RIM1YCR028C-A RIM101P33400 625 aa8.95□□□□□ -0.98
RIM1YCR028C-A BCH2P36122 765 aa8.91□□□□□ -0.98
RIM1YCR028C-A YBL029C-AQ3E756 94 aa8.72□□□□□ -1.01
RIM1YCR028C-A OXP1P28273 1286 aa8.67□□□□□ -1.02
RIM1YCR028C-A EPS1P40557 701 aa8.61□□□□□ -1.03
RIM1YCR028C-A BDF1P35817 686 aa8.6□□□□□ -1.03
RIM1YCR028C-A YIL055CP40523 627 aaKnown RBP8.59□□□□□ -1.03
RIM1YCR028C-A MST1P07236 462 aa8.54□□□□□ -1.04
RIM1YCR028C-A YAH1Q12184 172 aaKnown RBP8.54□□□□□ -1.04
RIM1YCR028C-A PTP3P40048 928 aa8.53□□□□□ -1.04
RIM1YCR028C-A YOR238WQ08634 303 aa8.52□□□□□ -1.05
RIM1YCR028C-A VNX1P42839 908 aa8.51□□□□□ -1.05
RIM1YCR028C-A SSP1P38871 571 aa8.46□□□□□ -1.06
RIM1YCR028C-A WSC3Q12215 556 aa8.46□□□□□ -1.06
RIM1YCR028C-A SPP1Q03012 353 aa8.45□□□□□ -1.06
RIM1YCR028C-A RSM7P47150 247 aa8.43□□□□□ -1.06
RIM1YCR028C-A YLR271WQ06152 274 aa8.39□□□□□ -1.07
RIM1YCR028C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
RIM1YCR028C-A AIR2Q12476 344 aaKnown RBP8.35□□□□□ -1.07
RIM1YCR028C-A YJL171CP46992 396 aa8.34□□□□□ -1.07
RIM1YCR028C-A YAP5P40574 245 aa8.32□□□□□ -1.08
RIM1YCR028C-A AI2P03876 854 aa8.3□□□□□ -1.08
RIM1YCR028C-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
RIM1YCR028C-A FKH1P40466 484 aa8.29□□□□□ -1.08
RIM1YCR028C-A TIF11P38912 153 aaKnown RBP8.26□□□□□ -1.09
RIM1YCR028C-A BBC1P47068 1157 aa8.26□□□□□ -1.09
RIM1YCR028C-A GTT3P39996 337 aa8.21□□□□□ -1.1
RIM1YCR028C-A LDB19Q12502 818 aa8.19□□□□□ -1.1
RIM1YCR028C-A MGA2P40578 1113 aa8.17□□□□□ -1.1
RIM1YCR028C-A PSD2P53037 1138 aaKnown RBP8.17□□□□□ -1.1
RIM1YCR028C-A PIB1Q06651 286 aa8.15□□□□□ -1.1
RIM1YCR028C-A ULI1P43604 169 aa8.13□□□□□ -1.11
RIM1YCR028C-A CST9Q06032 482 aa8.13□□□□□ -1.11
RIM1YCR028C-A BMT6Q12291 365 aa8.13□□□□□ -1.11
RIM1YCR028C-A IOC2Q12072 812 aa8.08□□□□□ -1.12
RIM1YCR028C-A MRM1P25270 412 aa8.04□□□□□ -1.12
RIM1YCR028C-A RTG1P32607 177 aa7.93□□□□□ -1.14
RIM1YCR028C-A RTG3P38165 486 aa7.91□□□□□ -1.14
RIM1YCR028C-A SET4P42948 560 aa7.9□□□□□ -1.14
RIM1YCR028C-A NCR1Q12200 1170 aa7.88□□□□□ -1.15
RIM1YCR028C-A TRP5P00931 707 aaKnown RBP7.87□□□□□ -1.15
RIM1YCR028C-A MSB4Q12317 492 aa7.87□□□□□ -1.15
RIM1YCR028C-A RQC2Q12532 1038 aaKnown RBP7.87□□□□□ -1.15
RIM1YCR028C-A EAP1P36041 632 aaKnown RBP7.86□□□□□ -1.15
RIM1YCR028C-A RCR1P38212 213 aa7.86□□□□□ -1.15
RIM1YCR028C-A YOL036WQ08206 761 aa7.86□□□□□ -1.15
RIM1YCR028C-A VPS29P38759 282 aa7.84□□□□□ -1.15
RIM1YCR028C-A DMA1P38823 416 aa7.84□□□□□ -1.15
RIM1YCR028C-A RAM2P29703 316 aa7.79□□□□□ -1.16
RIM1YCR028C-A YMR1P47147 688 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
RIM1YCR028C-A YNL035CP53962 389 aaKnown RBP7.78□□□□□ -1.16
RIM1YCR028C-A YFR006WP43590 535 aa7.76□□□□□ -1.17
RIM1YCR028C-A DBP1P24784 617 aaKnown RBP7.74□□□□□ -1.17
RIM1YCR028C-A SEC61P32915 480 aa7.74□□□□□ -1.17
RIM1YCR028C-A SAP30P38429 201 aa7.72□□□□□ -1.17
RIM1YCR028C-A STS1P38637 319 aa7.71□□□□□ -1.18
RIM1YCR028C-A TFG1P41895 735 aaPredicted RBP7.69□□□□□ -1.18
RIM1YCR028C-A MAK11P20484 414 aaKnown RBP7.68□□□□□ -1.18
RIM1YCR028C-A BCK2P33306 851 aa7.68□□□□□ -1.18
RIM1YCR028C-A VMA1P17255 1071 aaKnown RBP7.67□□□□□ -1.18
RIM1YCR028C-A MIF2P35201 549 aa7.62□□□□□ -1.19
RIM1YCR028C-A DAN4P47179 1161 aa7.61□□□□□ -1.19
RIM1YCR028C-A SET1P38827 1080 aaKnown RBP7.6□□□□□ -1.19
RIM1YCR028C-A SAM3Q08986 587 aa7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 6.1 ms