RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B FAP1P53971 965 aa10.25□□□□□ -0.77
HTL1YCR020W-B MTC1P47018 478 aaKnown RBP10.15□□□□□ -0.78
HTL1YCR020W-B PRY3P47033 881 aa9.69□□□□□ -0.86
HTL1YCR020W-B DRS1P32892 752 aaKnown RBP9.2□□□□□ -0.94
HTL1YCR020W-B YCK3P39962 524 aa9.07□□□□□ -0.96
HTL1YCR020W-B HAA1Q12753 694 aaKnown RBP9□□□□□ -0.97
HTL1YCR020W-B AAD16Q02895 342 aa8.99□□□□□ -0.97
HTL1YCR020W-B PRI1P10363 409 aa8.85□□□□□ -0.99
HTL1YCR020W-B ISW2Q08773 1120 aa8.41□□□□□ -1.06
HTL1YCR020W-B RPG1P38249 964 aaKnown RBP8.37□□□□□ -1.07
HTL1YCR020W-B TSR3Q12094 313 aaKnown RBP8.29□□□□□ -1.08
HTL1YCR020W-B DIP2Q12220 943 aaPredicted RBP8.1□□□□□ -1.11
HTL1YCR020W-B YGL015CP33199 130 aa8.07□□□□□ -1.12
HTL1YCR020W-B BUD31P25337 157 aaPredicted RBP8.03□□□□□ -1.12
HTL1YCR020W-B MRPL32P25348 183 aa7.99□□□□□ -1.13
HTL1YCR020W-B RSE1Q04693 1361 aaKnown RBP7.9□□□□□ -1.14
HTL1YCR020W-B AVT3P36062 692 aa7.77□□□□□ -1.17
HTL1YCR020W-B RPL17AP05740 184 aaKnown RBP7.7□□□□□ -1.18
HTL1YCR020W-B RPL17BP46990 184 aaKnown RBP7.7□□□□□ -1.18
HTL1YCR020W-B REB1P21538 810 aa7.64□□□□□ -1.19
HTL1YCR020W-B BFR2Q06631 534 aaKnown RBP7.6□□□□□ -1.19
HTL1YCR020W-B CDC27P38042 758 aa7.53□□□□□ -1.2
HTL1YCR020W-B SIS1P25294 352 aaKnown RBP7.52□□□□□ -1.21
HTL1YCR020W-B SPT21P35209 758 aa7.44□□□□□ -1.22
HTL1YCR020W-B YKR023WP36119 530 aaKnown RBP7.41□□□□□ -1.22
HTL1YCR020W-B UBP10P53874 792 aaPredicted RBP7.3□□□□□ -1.24
HTL1YCR020W-B MAP2P38174 421 aaKnown RBP7.29□□□□□ -1.24
HTL1YCR020W-B UBP9P39967 754 aa7.26□□□□□ -1.25
HTL1YCR020W-B DCD1P06773 312 aa7.23□□□□□ -1.25
HTL1YCR020W-B TFC8Q12308 588 aa7.23□□□□□ -1.25
HTL1YCR020W-B HOP09932 586 aa7.22□□□□□ -1.25
HTL1YCR020W-B SCY1P53009 804 aa7.06□□□□□ -1.28
HTL1YCR020W-B RIM101P33400 625 aa7.05□□□□□ -1.28
HTL1YCR020W-B TIF4632P39936 914 aaKnown RBP7.03□□□□□ -1.28
HTL1YCR020W-B TGL3P40308 642 aa7□□□□□ -1.29
HTL1YCR020W-B BCH2P36122 765 aa6.98□□□□□ -1.29
HTL1YCR020W-B SLX5P32828 619 aaKnown RBP6.96□□□□□ -1.3
HTL1YCR020W-B OXP1P28273 1286 aa6.83□□□□□ -1.32
HTL1YCR020W-B EPS1P40557 701 aa6.77□□□□□ -1.33
HTL1YCR020W-B BDF1P35817 686 aa6.75□□□□□ -1.33
HTL1YCR020W-B YIL055CP40523 627 aaKnown RBP6.7□□□□□ -1.34
HTL1YCR020W-B PTP3P40048 928 aa6.69□□□□□ -1.34
HTL1YCR020W-B YBL029C-AQ3E756 94 aa6.67□□□□□ -1.34
HTL1YCR020W-B MST1P07236 462 aa6.66□□□□□ -1.34
HTL1YCR020W-B YAH1Q12184 172 aaKnown RBP6.6□□□□□ -1.35
HTL1YCR020W-B NSR1P27476 414 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
HTL1YCR020W-B RSM7P47150 247 aa6.56□□□□□ -1.36
HTL1YCR020W-B YOR238WQ08634 303 aa6.55□□□□□ -1.36
HTL1YCR020W-B AI2P03876 854 aa6.54□□□□□ -1.36
HTL1YCR020W-B YJL171CP46992 396 aa6.54□□□□□ -1.36
HTL1YCR020W-B TFA1P36100 482 aa6.53□□□□□ -1.36
HTL1YCR020W-B VNX1P42839 908 aa6.53□□□□□ -1.36
HTL1YCR020W-B BBC1P47068 1157 aa6.52□□□□□ -1.37
HTL1YCR020W-B AIR2Q12476 344 aaKnown RBP6.5□□□□□ -1.37
HTL1YCR020W-B YAP5P40574 245 aa6.47□□□□□ -1.37
HTL1YCR020W-B SPP1Q03012 353 aa6.47□□□□□ -1.37
HTL1YCR020W-B YLR271WQ06152 274 aa6.43□□□□□ -1.38
HTL1YCR020W-B FKH1P40466 484 aa6.42□□□□□ -1.38
HTL1YCR020W-B WSC3Q12215 556 aa6.4□□□□□ -1.38
HTL1YCR020W-B PSD2P53037 1138 aaKnown RBP6.39□□□□□ -1.39
HTL1YCR020W-B TIF11P38912 153 aaKnown RBP6.34□□□□□ -1.39
HTL1YCR020W-B SSP1P38871 571 aa6.31□□□□□ -1.4
HTL1YCR020W-B BMT6Q12291 365 aa6.31□□□□□ -1.4
HTL1YCR020W-B PIB1Q06651 286 aa6.3□□□□□ -1.4
HTL1YCR020W-B GTT3P39996 337 aa6.29□□□□□ -1.4
HTL1YCR020W-B ARP8Q12386 881 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
HTL1YCR020W-B MRM1P25270 412 aa6.28□□□□□ -1.4
HTL1YCR020W-B IOC2Q12072 812 aa6.27□□□□□ -1.41
HTL1YCR020W-B LDB19Q12502 818 aa6.25□□□□□ -1.41
HTL1YCR020W-B ULI1P43604 169 aa6.23□□□□□ -1.41
HTL1YCR020W-B VPS29P38759 282 aa6.2□□□□□ -1.42
HTL1YCR020W-B CST9Q06032 482 aa6.2□□□□□ -1.42
HTL1YCR020W-B YOL036WQ08206 761 aa6.18□□□□□ -1.42
HTL1YCR020W-B MSB4Q12317 492 aa6.18□□□□□ -1.42
HTL1YCR020W-B MGA2P40578 1113 aa6.16□□□□□ -1.42
HTL1YCR020W-B STS1P38637 319 aa6.15□□□□□ -1.42
HTL1YCR020W-B SET4P42948 560 aa6.14□□□□□ -1.43
HTL1YCR020W-B YFR006WP43590 535 aa6.14□□□□□ -1.43
HTL1YCR020W-B YMR1P47147 688 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
HTL1YCR020W-B RGA2Q06407 1009 aa6.14□□□□□ -1.43
HTL1YCR020W-B TRP5P00931 707 aaKnown RBP6.13□□□□□ -1.43
HTL1YCR020W-B DBP1P24784 617 aaKnown RBP6.13□□□□□ -1.43
HTL1YCR020W-B RTG3P38165 486 aa6.13□□□□□ -1.43
HTL1YCR020W-B VMA1P17255 1071 aaKnown RBP6.12□□□□□ -1.43
HTL1YCR020W-B RCR1P38212 213 aa6.11□□□□□ -1.43
HTL1YCR020W-B RTG1P32607 177 aa6.1□□□□□ -1.43
HTL1YCR020W-B EAP1P36041 632 aaKnown RBP6.1□□□□□ -1.43
HTL1YCR020W-B SAM3Q08986 587 aa6.1□□□□□ -1.43
HTL1YCR020W-B YNL035CP53962 389 aaKnown RBP6.04□□□□□ -1.44
HTL1YCR020W-B NCR1Q12200 1170 aa6.03□□□□□ -1.44
HTL1YCR020W-B SEC61P32915 480 aa6.02□□□□□ -1.45
HTL1YCR020W-B DAN4P47179 1161 aa6.01□□□□□ -1.45
HTL1YCR020W-B BCK2P33306 851 aa5.97□□□□□ -1.45
HTL1YCR020W-B GYP5Q12344 894 aa5.94□□□□□ -1.46
HTL1YCR020W-B ABP1P15891 592 aaKnown RBP5.92□□□□□ -1.46
HTL1YCR020W-B SAP30P38429 201 aa5.92□□□□□ -1.46
HTL1YCR020W-B JIP4Q03361 876 aa5.92□□□□□ -1.46
HTL1YCR020W-B DCW1P36091 449 aa5.91□□□□□ -1.46
HTL1YCR020W-B HTA1P04911 132 aaKnown RBP5.9□□□□□ -1.46
HTL1YCR020W-B HTA2P04912 132 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms