RNA–Protein interactions for RNA: YCL063W

VAC17, Transcript of Phosphoprotein involved in vacuole inheritance, yeastyeast

Gene VAC17, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC17YCL063W MTC1P47018 478 aaKnown RBP18.08■□□□□ 0.48
VAC17YCL063W FAP1P53971 965 aa16.85■□□□□ 0.29
VAC17YCL063W DRS1P32892 752 aaKnown RBP16.37■□□□□ 0.21
VAC17YCL063W PRY3P47033 881 aa15.9■□□□□ 0.14
VAC17YCL063W PRI1P10363 409 aa15.56■□□□□ 0.08
VAC17YCL063W AAD16Q02895 342 aa15.49■□□□□ 0.07
VAC17YCL063W YCK3P39962 524 aa15.19■□□□□ 0.02
VAC17YCL063W ISW2Q08773 1120 aa15.01□□□□□ -0.01
VAC17YCL063W RPG1P38249 964 aaKnown RBP14.99□□□□□ -0.01
VAC17YCL063W HAA1Q12753 694 aaKnown RBP14.78□□□□□ -0.04
VAC17YCL063W TSR3Q12094 313 aaKnown RBP14.74□□□□□ -0.05
VAC17YCL063W DIP2Q12220 943 aaPredicted RBP14.55□□□□□ -0.08
VAC17YCL063W RSE1Q04693 1361 aaKnown RBP14.16□□□□□ -0.14
VAC17YCL063W MRPL32P25348 183 aa14.02□□□□□ -0.17
VAC17YCL063W AVT3P36062 692 aa13.91□□□□□ -0.18
VAC17YCL063W RPL17AP05740 184 aaKnown RBP13.81□□□□□ -0.2
VAC17YCL063W RPL17BP46990 184 aaKnown RBP13.81□□□□□ -0.2
VAC17YCL063W REB1P21538 810 aa13.72□□□□□ -0.21
VAC17YCL063W YGL015CP33199 130 aa13.57□□□□□ -0.24
VAC17YCL063W CDC27P38042 758 aa13.4□□□□□ -0.26
VAC17YCL063W BFR2Q06631 534 aaKnown RBP13.33□□□□□ -0.28
VAC17YCL063W SPT21P35209 758 aa13.22□□□□□ -0.29
VAC17YCL063W YKR023WP36119 530 aaKnown RBP13.22□□□□□ -0.29
VAC17YCL063W MAP2P38174 421 aaKnown RBP12.99□□□□□ -0.33
VAC17YCL063W DCD1P06773 312 aa12.96□□□□□ -0.33
VAC17YCL063W HOP09932 586 aa12.95□□□□□ -0.34
VAC17YCL063W UBP10P53874 792 aaPredicted RBP12.9□□□□□ -0.34
VAC17YCL063W TFC8Q12308 588 aa12.89□□□□□ -0.35
VAC17YCL063W BUD31P25337 157 aaPredicted RBP12.72□□□□□ -0.37
VAC17YCL063W SCY1P53009 804 aa12.62□□□□□ -0.39
VAC17YCL063W RIM101P33400 625 aa12.6□□□□□ -0.39
VAC17YCL063W BCH2P36122 765 aa12.47□□□□□ -0.41
VAC17YCL063W SLX5P32828 619 aaKnown RBP12.41□□□□□ -0.42
VAC17YCL063W TGL3P40308 642 aa12.33□□□□□ -0.44
VAC17YCL063W TIF4632P39936 914 aaKnown RBP12.32□□□□□ -0.44
VAC17YCL063W OXP1P28273 1286 aa12.24□□□□□ -0.45
VAC17YCL063W EPS1P40557 701 aa12.11□□□□□ -0.47
VAC17YCL063W BDF1P35817 686 aa12.07□□□□□ -0.48
VAC17YCL063W SIS1P25294 352 aaKnown RBP12.03□□□□□ -0.48
VAC17YCL063W UBP9P39967 754 aa12.03□□□□□ -0.48
VAC17YCL063W PTP3P40048 928 aa11.95□□□□□ -0.5
VAC17YCL063W YIL055CP40523 627 aaKnown RBP11.89□□□□□ -0.51
VAC17YCL063W MST1P07236 462 aa11.79□□□□□ -0.52
VAC17YCL063W RSM7P47150 247 aa11.77□□□□□ -0.53
VAC17YCL063W YAH1Q12184 172 aaKnown RBP11.77□□□□□ -0.53
VAC17YCL063W YBL029C-AQ3E756 94 aa11.75□□□□□ -0.53
VAC17YCL063W AI2P03876 854 aa11.73□□□□□ -0.53
VAC17YCL063W YOR238WQ08634 303 aa11.69□□□□□ -0.54
VAC17YCL063W BBC1P47068 1157 aa11.66□□□□□ -0.54
VAC17YCL063W NSR1P27476 414 aaKnown RBP RIP-Chip data11.6□□□□□ -0.55not detected
VAC17YCL063W VNX1P42839 908 aa11.56□□□□□ -0.56
VAC17YCL063W YLR271WQ06152 274 aa11.56□□□□□ -0.56
VAC17YCL063W YAP5P40574 245 aa11.53□□□□□ -0.56
VAC17YCL063W WSC3Q12215 556 aa11.49□□□□□ -0.57
VAC17YCL063W PSD2P53037 1138 aaKnown RBP11.42□□□□□ -0.58
VAC17YCL063W SPP1Q03012 353 aa11.42□□□□□ -0.58
VAC17YCL063W PIB1Q06651 286 aa11.36□□□□□ -0.59
VAC17YCL063W TFA1P36100 482 aa11.31□□□□□ -0.6
VAC17YCL063W MRM1P25270 412 aa11.3□□□□□ -0.6
VAC17YCL063W TIF11P38912 153 aaKnown RBP11.27□□□□□ -0.61
VAC17YCL063W GTT3P39996 337 aa11.27□□□□□ -0.61
VAC17YCL063W AIR2Q12476 344 aaKnown RBP11.26□□□□□ -0.61
VAC17YCL063W FKH1P40466 484 aa11.22□□□□□ -0.61
VAC17YCL063W SSP1P38871 571 aa11.19□□□□□ -0.62
VAC17YCL063W CST9Q06032 482 aa11.15□□□□□ -0.62
VAC17YCL063W IOC2Q12072 812 aa11.14□□□□□ -0.63
VAC17YCL063W LDB19Q12502 818 aa11.14□□□□□ -0.63
VAC17YCL063W ULI1P43604 169 aa11.13□□□□□ -0.63
VAC17YCL063W VPS29P38759 282 aa11.08□□□□□ -0.64
VAC17YCL063W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
VAC17YCL063W YFR006WP43590 535 aa11.04□□□□□ -0.64
VAC17YCL063W YJL171CP46992 396 aa11.04□□□□□ -0.64
VAC17YCL063W DBP1P24784 617 aaKnown RBP11.01□□□□□ -0.65
VAC17YCL063W STS1P38637 319 aa11□□□□□ -0.65
VAC17YCL063W SET4P42948 560 aa11□□□□□ -0.65
VAC17YCL063W YMR1P47147 688 aaKnown RBP RIP-Chip data11□□□□□ -0.65not detected
VAC17YCL063W YOL036WQ08206 761 aa11□□□□□ -0.65
VAC17YCL063W RCR1P38212 213 aa10.98□□□□□ -0.65
VAC17YCL063W MGA2P40578 1113 aa10.96□□□□□ -0.65
VAC17YCL063W RTG3P38165 486 aa10.95□□□□□ -0.66
VAC17YCL063W MSB4Q12317 492 aa10.95□□□□□ -0.66
VAC17YCL063W TRP5P00931 707 aaKnown RBP10.93□□□□□ -0.66
VAC17YCL063W VMA1P17255 1071 aaKnown RBP10.92□□□□□ -0.66
VAC17YCL063W BMT6Q12291 365 aa10.91□□□□□ -0.66
VAC17YCL063W RTG1P32607 177 aa10.89□□□□□ -0.67
VAC17YCL063W EAP1P36041 632 aaKnown RBP10.87□□□□□ -0.67
VAC17YCL063W SAM3Q08986 587 aa10.83□□□□□ -0.68
VAC17YCL063W NCR1Q12200 1170 aa10.79□□□□□ -0.68
VAC17YCL063W YNL035CP53962 389 aaKnown RBP10.77□□□□□ -0.69
VAC17YCL063W SEC61P32915 480 aa10.71□□□□□ -0.69
VAC17YCL063W DAN4P47179 1161 aa10.68□□□□□ -0.7
VAC17YCL063W GYP5Q12344 894 aa10.65□□□□□ -0.7
VAC17YCL063W DCW1P36091 449 aa10.62□□□□□ -0.71
VAC17YCL063W SAP30P38429 201 aa10.59□□□□□ -0.71
VAC17YCL063W JIP4Q03361 876 aa10.55□□□□□ -0.72
VAC17YCL063W HTA1P04911 132 aaKnown RBP10.54□□□□□ -0.72
VAC17YCL063W HTA2P04912 132 aa10.54□□□□□ -0.72
VAC17YCL063W YEL023CP39992 682 aa10.52□□□□□ -0.73
VAC17YCL063W TFG1P41895 735 aaPredicted RBP10.52□□□□□ -0.73
VAC17YCL063W ABP1P15891 592 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms