RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeastyeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAR4YCL055W MTC1P47018 478 aaKnown RBP15.4■□□□□ 0.06
KAR4YCL055W FAP1P53971 965 aa14.65□□□□□ -0.06
KAR4YCL055W PRY3P47033 881 aa13.79□□□□□ -0.2
KAR4YCL055W DRS1P32892 752 aaKnown RBP13.72□□□□□ -0.21
KAR4YCL055W AAD16Q02895 342 aa13.38□□□□□ -0.27
KAR4YCL055W PRI1P10363 409 aa13.37□□□□□ -0.27
KAR4YCL055W ISW2Q08773 1120 aa12.95□□□□□ -0.34
KAR4YCL055W YCK3P39962 524 aa12.94□□□□□ -0.34
KAR4YCL055W HAA1Q12753 694 aaKnown RBP12.91□□□□□ -0.34
KAR4YCL055W RPG1P38249 964 aaKnown RBP12.81□□□□□ -0.36
KAR4YCL055W TSR3Q12094 313 aaKnown RBP12.59□□□□□ -0.39
KAR4YCL055W DIP2Q12220 943 aaPredicted RBP12.28□□□□□ -0.44
KAR4YCL055W MRPL32P25348 183 aa12.13□□□□□ -0.47
KAR4YCL055W RSE1Q04693 1361 aaKnown RBP12.06□□□□□ -0.48
KAR4YCL055W YGL015CP33199 130 aa11.82□□□□□ -0.52
KAR4YCL055W REB1P21538 810 aa11.74□□□□□ -0.53
KAR4YCL055W RPL17AP05740 184 aaKnown RBP11.71□□□□□ -0.53
KAR4YCL055W RPL17BP46990 184 aaKnown RBP11.71□□□□□ -0.53
KAR4YCL055W AVT3P36062 692 aa11.63□□□□□ -0.55
KAR4YCL055W CDC27P38042 758 aa11.37□□□□□ -0.59
KAR4YCL055W YKR023WP36119 530 aaKnown RBP11.18□□□□□ -0.62
KAR4YCL055W UBP10P53874 792 aaPredicted RBP11.17□□□□□ -0.62
KAR4YCL055W SPT21P35209 758 aa11.15□□□□□ -0.62
KAR4YCL055W BUD31P25337 157 aaPredicted RBP11.13□□□□□ -0.63
KAR4YCL055W MAP2P38174 421 aaKnown RBP11.1□□□□□ -0.63
KAR4YCL055W BFR2Q06631 534 aaKnown RBP11.08□□□□□ -0.64
KAR4YCL055W TFC8Q12308 588 aa10.96□□□□□ -0.65
KAR4YCL055W HOP09932 586 aa10.95□□□□□ -0.66
KAR4YCL055W DCD1P06773 312 aa10.91□□□□□ -0.66
KAR4YCL055W SCY1P53009 804 aa10.77□□□□□ -0.69
KAR4YCL055W TIF4632P39936 914 aaKnown RBP10.74□□□□□ -0.69
KAR4YCL055W SLX5P32828 619 aaKnown RBP10.69□□□□□ -0.7
KAR4YCL055W TGL3P40308 642 aa10.68□□□□□ -0.7
KAR4YCL055W RIM101P33400 625 aa10.61□□□□□ -0.71
KAR4YCL055W UBP9P39967 754 aa10.59□□□□□ -0.71
KAR4YCL055W BCH2P36122 765 aa10.57□□□□□ -0.72
KAR4YCL055W SIS1P25294 352 aaKnown RBP10.54□□□□□ -0.72
KAR4YCL055W EPS1P40557 701 aa10.27□□□□□ -0.77
KAR4YCL055W BDF1P35817 686 aa10.24□□□□□ -0.77
KAR4YCL055W OXP1P28273 1286 aa10.21□□□□□ -0.77
KAR4YCL055W MST1P07236 462 aa10.14□□□□□ -0.79
KAR4YCL055W PTP3P40048 928 aa10.14□□□□□ -0.79
KAR4YCL055W YIL055CP40523 627 aaKnown RBP10.12□□□□□ -0.79
KAR4YCL055W YOR238WQ08634 303 aa10.1□□□□□ -0.79
KAR4YCL055W YBL029C-AQ3E756 94 aa10.09□□□□□ -0.79
KAR4YCL055W NSR1P27476 414 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
KAR4YCL055W BBC1P47068 1157 aa10□□□□□ -0.81
KAR4YCL055W VNX1P42839 908 aa9.95□□□□□ -0.82
KAR4YCL055W RSM7P47150 247 aa9.95□□□□□ -0.82
KAR4YCL055W YAP5P40574 245 aa9.94□□□□□ -0.82
KAR4YCL055W AI2P03876 854 aa9.91□□□□□ -0.82
KAR4YCL055W SPP1Q03012 353 aa9.88□□□□□ -0.83
KAR4YCL055W YAH1Q12184 172 aaKnown RBP9.85□□□□□ -0.83
KAR4YCL055W WSC3Q12215 556 aa9.84□□□□□ -0.83
KAR4YCL055W GTT3P39996 337 aa9.75□□□□□ -0.85
KAR4YCL055W TIF11P38912 153 aaKnown RBP9.73□□□□□ -0.85
KAR4YCL055W AIR2Q12476 344 aaKnown RBP9.71□□□□□ -0.86
KAR4YCL055W FKH1P40466 484 aa9.69□□□□□ -0.86
KAR4YCL055W YJL171CP46992 396 aa9.69□□□□□ -0.86
KAR4YCL055W YLR271WQ06152 274 aa9.64□□□□□ -0.87
KAR4YCL055W PSD2P53037 1138 aaKnown RBP9.59□□□□□ -0.87
KAR4YCL055W LDB19Q12502 818 aa9.59□□□□□ -0.87
KAR4YCL055W TFA1P36100 482 aa9.58□□□□□ -0.88
KAR4YCL055W ULI1P43604 169 aa9.58□□□□□ -0.88
KAR4YCL055W PIB1Q06651 286 aa9.58□□□□□ -0.88
KAR4YCL055W IOC2Q12072 812 aa9.54□□□□□ -0.88
KAR4YCL055W MRM1P25270 412 aa9.52□□□□□ -0.89
KAR4YCL055W BMT6Q12291 365 aa9.51□□□□□ -0.89
KAR4YCL055W MSB4Q12317 492 aa9.48□□□□□ -0.89
KAR4YCL055W EAP1P36041 632 aaKnown RBP9.45□□□□□ -0.9
KAR4YCL055W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
KAR4YCL055W SET4P42948 560 aa9.38□□□□□ -0.91
KAR4YCL055W YOL036WQ08206 761 aa9.38□□□□□ -0.91
KAR4YCL055W RTG1P32607 177 aa9.37□□□□□ -0.91
KAR4YCL055W YMR1P47147 688 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
KAR4YCL055W SSP1P38871 571 aa9.35□□□□□ -0.91
KAR4YCL055W TRP5P00931 707 aaKnown RBP9.34□□□□□ -0.91
KAR4YCL055W DBP1P24784 617 aaKnown RBP9.32□□□□□ -0.92
KAR4YCL055W NCR1Q12200 1170 aa9.32□□□□□ -0.92
KAR4YCL055W VPS29P38759 282 aa9.31□□□□□ -0.92
KAR4YCL055W YNL035CP53962 389 aaKnown RBP9.29□□□□□ -0.92
KAR4YCL055W RTG3P38165 486 aa9.28□□□□□ -0.92
KAR4YCL055W VMA1P17255 1071 aaKnown RBP9.27□□□□□ -0.93
KAR4YCL055W SEC61P32915 480 aa9.27□□□□□ -0.93
KAR4YCL055W YFR006WP43590 535 aa9.27□□□□□ -0.93
KAR4YCL055W CST9Q06032 482 aa9.26□□□□□ -0.93
KAR4YCL055W STS1P38637 319 aa9.24□□□□□ -0.93
KAR4YCL055W MGA2P40578 1113 aa9.23□□□□□ -0.93
KAR4YCL055W SAM3Q08986 587 aa9.23□□□□□ -0.93
KAR4YCL055W TFG1P41895 735 aaPredicted RBP9.19□□□□□ -0.94
KAR4YCL055W ABP1P15891 592 aaKnown RBP9.12□□□□□ -0.95
KAR4YCL055W JIP4Q03361 876 aa9.12□□□□□ -0.95
KAR4YCL055W DAN4P47179 1161 aa9.11□□□□□ -0.95
KAR4YCL055W RCR1P38212 213 aa9.1□□□□□ -0.95
KAR4YCL055W SAP30P38429 201 aa9.1□□□□□ -0.95
KAR4YCL055W GYP5Q12344 894 aa9.08□□□□□ -0.96
KAR4YCL055W YDL129WQ07555 291 aa9.05□□□□□ -0.96
KAR4YCL055W HTA1P04911 132 aaKnown RBP9.04□□□□□ -0.96
KAR4YCL055W HTA2P04912 132 aa9.04□□□□□ -0.96
KAR4YCL055W CHL1P22516 861 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms