RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA2YBR293W FAP1P53971 965 aa11.01□□□□□ -0.65
VBA2YBR293W MTC1P47018 478 aaKnown RBP10.76□□□□□ -0.69
VBA2YBR293W PRY3P47033 881 aa10.45□□□□□ -0.74
VBA2YBR293W DRS1P32892 752 aaKnown RBP10.16□□□□□ -0.78
VBA2YBR293W YCK3P39962 524 aa9.81□□□□□ -0.84
VBA2YBR293W HAA1Q12753 694 aaKnown RBP9.65□□□□□ -0.86
VBA2YBR293W AAD16Q02895 342 aa9.36□□□□□ -0.91
VBA2YBR293W PRI1P10363 409 aa9.1□□□□□ -0.95
VBA2YBR293W ISW2Q08773 1120 aa8.97□□□□□ -0.97
VBA2YBR293W DIP2Q12220 943 aaPredicted RBP8.88□□□□□ -0.99
VBA2YBR293W BUD31P25337 157 aaPredicted RBP8.86□□□□□ -0.99
VBA2YBR293W RPG1P38249 964 aaKnown RBP8.86□□□□□ -0.99
VBA2YBR293W TSR3Q12094 313 aaKnown RBP8.59□□□□□ -1.03
VBA2YBR293W RSE1Q04693 1361 aaKnown RBP8.58□□□□□ -1.04
VBA2YBR293W AVT3P36062 692 aa8.51□□□□□ -1.05
VBA2YBR293W YGL015CP33199 130 aa8.49□□□□□ -1.05
VBA2YBR293W BFR2Q06631 534 aaKnown RBP8.48□□□□□ -1.05
VBA2YBR293W RPL17AP05740 184 aaKnown RBP8.3□□□□□ -1.08
VBA2YBR293W REB1P21538 810 aa8.3□□□□□ -1.08
VBA2YBR293W RPL17BP46990 184 aaKnown RBP8.3□□□□□ -1.08
VBA2YBR293W MRPL32P25348 183 aa8.29□□□□□ -1.08
VBA2YBR293W SIS1P25294 352 aaKnown RBP8.21□□□□□ -1.09
VBA2YBR293W SPT21P35209 758 aa7.86□□□□□ -1.15
VBA2YBR293W CDC27P38042 758 aa7.79□□□□□ -1.16
VBA2YBR293W YKR023WP36119 530 aaKnown RBP7.78□□□□□ -1.16
VBA2YBR293W HOP09932 586 aa7.68□□□□□ -1.18
VBA2YBR293W UBP9P39967 754 aa7.65□□□□□ -1.18
VBA2YBR293W TFC8Q12308 588 aa7.64□□□□□ -1.19
VBA2YBR293W DCD1P06773 312 aa7.63□□□□□ -1.19
VBA2YBR293W RIM101P33400 625 aa7.63□□□□□ -1.19
VBA2YBR293W UBP10P53874 792 aaPredicted RBP7.59□□□□□ -1.19
VBA2YBR293W MAP2P38174 421 aaKnown RBP7.58□□□□□ -1.2
VBA2YBR293W TFA1P36100 482 aa7.53□□□□□ -1.2
VBA2YBR293W SCY1P53009 804 aa7.46□□□□□ -1.21
VBA2YBR293W BCH2P36122 765 aa7.4□□□□□ -1.22
VBA2YBR293W YIL055CP40523 627 aaKnown RBP7.38□□□□□ -1.23
VBA2YBR293W OXP1P28273 1286 aa7.36□□□□□ -1.23
VBA2YBR293W SLX5P32828 619 aaKnown RBP7.36□□□□□ -1.23
VBA2YBR293W PTP3P40048 928 aa7.35□□□□□ -1.23
VBA2YBR293W TIF4632P39936 914 aaKnown RBP7.34□□□□□ -1.23
VBA2YBR293W TGL3P40308 642 aa7.26□□□□□ -1.25
VBA2YBR293W YAH1Q12184 172 aaKnown RBP7.25□□□□□ -1.25
VBA2YBR293W EPS1P40557 701 aa7.24□□□□□ -1.25
VBA2YBR293W RSM7P47150 247 aa7.2□□□□□ -1.26
VBA2YBR293W BDF1P35817 686 aa7.19□□□□□ -1.26
VBA2YBR293W BBC1P47068 1157 aa7.17□□□□□ -1.26
VBA2YBR293W AI2P03876 854 aa7.13□□□□□ -1.27
VBA2YBR293W YLR271WQ06152 274 aa7.06□□□□□ -1.28
VBA2YBR293W RQC2Q12532 1038 aaKnown RBP7.02□□□□□ -1.29
VBA2YBR293W SSP1P38871 571 aa7.01□□□□□ -1.29
VBA2YBR293W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
VBA2YBR293W YOR238WQ08634 303 aa6.97□□□□□ -1.29
VBA2YBR293W YAP5P40574 245 aa6.93□□□□□ -1.3
VBA2YBR293W RGA2Q06407 1009 aa6.93□□□□□ -1.3
VBA2YBR293W PSD2P53037 1138 aaKnown RBP6.92□□□□□ -1.3
VBA2YBR293W MST1P07236 462 aa6.91□□□□□ -1.3
VBA2YBR293W MRM1P25270 412 aa6.89□□□□□ -1.31
VBA2YBR293W NSR1P27476 414 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
VBA2YBR293W YBL029C-AQ3E756 94 aa6.84□□□□□ -1.31
VBA2YBR293W MGA2P40578 1113 aa6.83□□□□□ -1.32
VBA2YBR293W GTT3P39996 337 aa6.82□□□□□ -1.32
VBA2YBR293W YJL171CP46992 396 aa6.81□□□□□ -1.32
VBA2YBR293W CST9Q06032 482 aa6.81□□□□□ -1.32
VBA2YBR293W WSC3Q12215 556 aa6.81□□□□□ -1.32
VBA2YBR293W PIB1Q06651 286 aa6.79□□□□□ -1.32
VBA2YBR293W VNX1P42839 908 aa6.76□□□□□ -1.33
VBA2YBR293W SPP1Q03012 353 aa6.76□□□□□ -1.33
VBA2YBR293W RTG3P38165 486 aa6.75□□□□□ -1.33
VBA2YBR293W AIR2Q12476 344 aaKnown RBP6.75□□□□□ -1.33
VBA2YBR293W YMR1P47147 688 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
VBA2YBR293W DBP1P24784 617 aaKnown RBP6.68□□□□□ -1.34
VBA2YBR293W VPS29P38759 282 aa6.68□□□□□ -1.34
VBA2YBR293W TIF11P38912 153 aaKnown RBP6.67□□□□□ -1.34
VBA2YBR293W YFR006WP43590 535 aa6.67□□□□□ -1.34
VBA2YBR293W RCR1P38212 213 aa6.63□□□□□ -1.35
VBA2YBR293W ULI1P43604 169 aa6.61□□□□□ -1.35
VBA2YBR293W STS1P38637 319 aa6.6□□□□□ -1.35
VBA2YBR293W FKH1P40466 484 aa6.59□□□□□ -1.35
VBA2YBR293W SET4P42948 560 aa6.59□□□□□ -1.36
VBA2YBR293W MSB4Q12317 492 aa6.59□□□□□ -1.36
VBA2YBR293W VMA1P17255 1071 aaKnown RBP6.58□□□□□ -1.36
VBA2YBR293W EAP1P36041 632 aaKnown RBP6.58□□□□□ -1.36
VBA2YBR293W YOL036WQ08206 761 aa6.57□□□□□ -1.36
VBA2YBR293W LDB19Q12502 818 aa6.56□□□□□ -1.36
VBA2YBR293W IOC2Q12072 812 aa6.53□□□□□ -1.36
VBA2YBR293W NOP2P40991 618 aaKnown RBP6.52□□□□□ -1.37
VBA2YBR293W TAF7Q05021 590 aa6.51□□□□□ -1.37
VBA2YBR293W TRP5P00931 707 aaKnown RBP6.5□□□□□ -1.37
VBA2YBR293W SAM3Q08986 587 aa6.5□□□□□ -1.37
VBA2YBR293W BMT6Q12291 365 aa6.49□□□□□ -1.37
VBA2YBR293W GYP5Q12344 894 aa6.48□□□□□ -1.37
VBA2YBR293W RTG1P32607 177 aa6.47□□□□□ -1.37
VBA2YBR293W RAM2P29703 316 aa6.46□□□□□ -1.38
VBA2YBR293W MIF2P35201 549 aa6.46□□□□□ -1.38
VBA2YBR293W DMA1P38823 416 aa6.45□□□□□ -1.38
VBA2YBR293W MAK11P20484 414 aaKnown RBP6.44□□□□□ -1.38
VBA2YBR293W DCW1P36091 449 aa6.44□□□□□ -1.38
VBA2YBR293W NCR1Q12200 1170 aa6.44□□□□□ -1.38
VBA2YBR293W ABP1P15891 592 aaKnown RBP6.43□□□□□ -1.38
VBA2YBR293W YNL035CP53962 389 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms