RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W MTC1P47018 478 aaKnown RBP10.39□□□□□ -0.75
DPB3YBR278W FAP1P53971 965 aa9.64□□□□□ -0.87
DPB3YBR278W DRS1P32892 752 aaKnown RBP9.56□□□□□ -0.88
DPB3YBR278W PRY3P47033 881 aa9.04□□□□□ -0.96
DPB3YBR278W PRI1P10363 409 aa8.86□□□□□ -0.99
DPB3YBR278W AAD16Q02895 342 aa8.85□□□□□ -0.99
DPB3YBR278W ISW2Q08773 1120 aa8.71□□□□□ -1.02
DPB3YBR278W RPG1P38249 964 aaKnown RBP8.59□□□□□ -1.03
DPB3YBR278W HAA1Q12753 694 aaKnown RBP8.47□□□□□ -1.05
DPB3YBR278W DIP2Q12220 943 aaPredicted RBP8.44□□□□□ -1.06
DPB3YBR278W YCK3P39962 524 aa8.39□□□□□ -1.07
DPB3YBR278W TSR3Q12094 313 aaKnown RBP8.38□□□□□ -1.07
DPB3YBR278W BFR2Q06631 534 aaKnown RBP8.24□□□□□ -1.09
DPB3YBR278W RSE1Q04693 1361 aaKnown RBP8.22□□□□□ -1.09
DPB3YBR278W MRPL32P25348 183 aa8.09□□□□□ -1.11
DPB3YBR278W AVT3P36062 692 aa8.03□□□□□ -1.12
DPB3YBR278W REB1P21538 810 aa7.99□□□□□ -1.13
DPB3YBR278W TFA1P36100 482 aa7.99□□□□□ -1.13
DPB3YBR278W RPL17AP05740 184 aaKnown RBP7.96□□□□□ -1.14
DPB3YBR278W RPL17BP46990 184 aaKnown RBP7.96□□□□□ -1.14
DPB3YBR278W YGL015CP33199 130 aa7.8□□□□□ -1.16
DPB3YBR278W CDC27P38042 758 aa7.58□□□□□ -1.2
DPB3YBR278W SPT21P35209 758 aa7.55□□□□□ -1.2
DPB3YBR278W YKR023WP36119 530 aaKnown RBP7.51□□□□□ -1.21
DPB3YBR278W UBP10P53874 792 aaPredicted RBP7.43□□□□□ -1.22
DPB3YBR278W HOP09932 586 aa7.39□□□□□ -1.23
DPB3YBR278W MAP2P38174 421 aaKnown RBP7.39□□□□□ -1.23
DPB3YBR278W TFC8Q12308 588 aa7.38□□□□□ -1.23
DPB3YBR278W DCD1P06773 312 aa7.36□□□□□ -1.23
DPB3YBR278W RIM101P33400 625 aa7.26□□□□□ -1.25
DPB3YBR278W SCY1P53009 804 aa7.23□□□□□ -1.25
DPB3YBR278W BUD31P25337 157 aaPredicted RBP7.2□□□□□ -1.26
DPB3YBR278W TIF4632P39936 914 aaKnown RBP7.18□□□□□ -1.26
DPB3YBR278W SLX5P32828 619 aaKnown RBP7.17□□□□□ -1.26
DPB3YBR278W BCH2P36122 765 aa7.13□□□□□ -1.27
DPB3YBR278W RQC2Q12532 1038 aaKnown RBP7.12□□□□□ -1.27
DPB3YBR278W TGL3P40308 642 aa7.1□□□□□ -1.27
DPB3YBR278W UBP9P39967 754 aa7□□□□□ -1.29
DPB3YBR278W YIL055CP40523 627 aaKnown RBP7□□□□□ -1.29
DPB3YBR278W OXP1P28273 1286 aa6.99□□□□□ -1.29
DPB3YBR278W PTP3P40048 928 aa6.99□□□□□ -1.29
DPB3YBR278W EPS1P40557 701 aa6.95□□□□□ -1.3
DPB3YBR278W BDF1P35817 686 aa6.92□□□□□ -1.3
DPB3YBR278W SIS1P25294 352 aaKnown RBP6.89□□□□□ -1.31
DPB3YBR278W BBC1P47068 1157 aa6.86□□□□□ -1.31
DPB3YBR278W RSM7P47150 247 aa6.84□□□□□ -1.31
DPB3YBR278W YAH1Q12184 172 aaKnown RBP6.83□□□□□ -1.32
DPB3YBR278W AI2P03876 854 aa6.79□□□□□ -1.32
DPB3YBR278W YOR238WQ08634 303 aa6.78□□□□□ -1.32
DPB3YBR278W MST1P07236 462 aa6.74□□□□□ -1.33
DPB3YBR278W NSR1P27476 414 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
DPB3YBR278W YAP5P40574 245 aa6.71□□□□□ -1.34
DPB3YBR278W YBL029C-AQ3E756 94 aa6.7□□□□□ -1.34
DPB3YBR278W DMA1P38823 416 aa6.69□□□□□ -1.34
DPB3YBR278W YLR271WQ06152 274 aa6.66□□□□□ -1.34
DPB3YBR278W VNX1P42839 908 aa6.61□□□□□ -1.35
DPB3YBR278W SSP1P38871 571 aa6.6□□□□□ -1.35
DPB3YBR278W GTT3P39996 337 aa6.6□□□□□ -1.35
DPB3YBR278W SPP1Q03012 353 aa6.6□□□□□ -1.35
DPB3YBR278W WSC3Q12215 556 aa6.6□□□□□ -1.35
DPB3YBR278W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
DPB3YBR278W PSD2P53037 1138 aaKnown RBP6.58□□□□□ -1.36
DPB3YBR278W MRM1P25270 412 aa6.54□□□□□ -1.36
DPB3YBR278W TIF11P38912 153 aaKnown RBP6.5□□□□□ -1.37
DPB3YBR278W PIB1Q06651 286 aa6.5□□□□□ -1.37
DPB3YBR278W YJL171CP46992 396 aa6.45□□□□□ -1.38
DPB3YBR278W MGA2P40578 1113 aa6.44□□□□□ -1.38
DPB3YBR278W ULI1P43604 169 aa6.42□□□□□ -1.38
DPB3YBR278W FKH1P40466 484 aa6.41□□□□□ -1.38
DPB3YBR278W YMR1P47147 688 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
DPB3YBR278W CST9Q06032 482 aa6.41□□□□□ -1.38
DPB3YBR278W AIR2Q12476 344 aaKnown RBP6.41□□□□□ -1.38
DPB3YBR278W LDB19Q12502 818 aa6.41□□□□□ -1.38
DPB3YBR278W RTG3P38165 486 aa6.4□□□□□ -1.38
DPB3YBR278W MSB4Q12317 492 aa6.39□□□□□ -1.39
DPB3YBR278W DBP1P24784 617 aaKnown RBP6.38□□□□□ -1.39
DPB3YBR278W EAP1P36041 632 aaKnown RBP6.38□□□□□ -1.39
DPB3YBR278W IOC2Q12072 812 aa6.36□□□□□ -1.39
DPB3YBR278W VPS29P38759 282 aa6.35□□□□□ -1.39
DPB3YBR278W SET4P42948 560 aa6.35□□□□□ -1.39
DPB3YBR278W YFR006WP43590 535 aa6.35□□□□□ -1.39
DPB3YBR278W YOL036WQ08206 761 aa6.34□□□□□ -1.39
DPB3YBR278W BMT6Q12291 365 aa6.32□□□□□ -1.4
DPB3YBR278W VMA1P17255 1071 aaKnown RBP6.31□□□□□ -1.4
DPB3YBR278W TAF7Q05021 590 aa6.31□□□□□ -1.4
DPB3YBR278W STS1P38637 319 aa6.3□□□□□ -1.4
DPB3YBR278W TRP5P00931 707 aaKnown RBP6.29□□□□□ -1.4
DPB3YBR278W RTG1P32607 177 aa6.29□□□□□ -1.4
DPB3YBR278W RCR1P38212 213 aa6.27□□□□□ -1.41
DPB3YBR278W NCR1Q12200 1170 aa6.26□□□□□ -1.41
DPB3YBR278W YNL035CP53962 389 aaKnown RBP6.25□□□□□ -1.41
DPB3YBR278W SAM3Q08986 587 aa6.25□□□□□ -1.41
DPB3YBR278W SAS10Q12136 610 aaPredicted RBP6.25□□□□□ -1.41
DPB3YBR278W LEO1P38439 464 aa6.24□□□□□ -1.41
DPB3YBR278W SEC61P32915 480 aa6.23□□□□□ -1.41
DPB3YBR278W TFG1P41895 735 aaPredicted RBP6.23□□□□□ -1.41
DPB3YBR278W ABP1P15891 592 aaKnown RBP6.21□□□□□ -1.42
DPB3YBR278W GYP5Q12344 894 aa6.2□□□□□ -1.42
DPB3YBR278W LEU3P08638 886 aa6.19□□□□□ -1.42
DPB3YBR278W HTA1P04911 132 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 1004 ms