RNA–Protein interactions for RNA: YBR250W

SPO23, Transcript of Protein of unknown function, yeastyeast

Gene SPO23, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO23YBR250W MTC1P47018 478 aaKnown RBP14.86□□□□□ -0.03
SPO23YBR250W DRS1P32892 752 aaKnown RBP13.7□□□□□ -0.22
SPO23YBR250W FAP1P53971 965 aa13.55□□□□□ -0.24
SPO23YBR250W PRY3P47033 881 aa12.75□□□□□ -0.37
SPO23YBR250W PRI1P10363 409 aa12.63□□□□□ -0.39
SPO23YBR250W AAD16Q02895 342 aa12.57□□□□□ -0.4
SPO23YBR250W ISW2Q08773 1120 aa12.33□□□□□ -0.44
SPO23YBR250W RPG1P38249 964 aaKnown RBP12.24□□□□□ -0.45
SPO23YBR250W YCK3P39962 524 aa12.09□□□□□ -0.47
SPO23YBR250W DIP2Q12220 943 aaPredicted RBP12.08□□□□□ -0.48
SPO23YBR250W TSR3Q12094 313 aaKnown RBP11.94□□□□□ -0.5
SPO23YBR250W HAA1Q12753 694 aaKnown RBP11.94□□□□□ -0.5
SPO23YBR250W RSE1Q04693 1361 aaKnown RBP11.71□□□□□ -0.53
SPO23YBR250W AVT3P36062 692 aa11.61□□□□□ -0.55
SPO23YBR250W MRPL32P25348 183 aa11.45□□□□□ -0.58
SPO23YBR250W RPL17AP05740 184 aaKnown RBP11.37□□□□□ -0.59
SPO23YBR250W RPL17BP46990 184 aaKnown RBP11.37□□□□□ -0.59
SPO23YBR250W REB1P21538 810 aa11.31□□□□□ -0.6
SPO23YBR250W BFR2Q06631 534 aaKnown RBP11.29□□□□□ -0.6
SPO23YBR250W YGL015CP33199 130 aa11.03□□□□□ -0.64
SPO23YBR250W SPT21P35209 758 aa10.88□□□□□ -0.67
SPO23YBR250W CDC27P38042 758 aa10.88□□□□□ -0.67
SPO23YBR250W YKR023WP36119 530 aaKnown RBP10.81□□□□□ -0.68
SPO23YBR250W HOP09932 586 aa10.58□□□□□ -0.72
SPO23YBR250W TFC8Q12308 588 aa10.57□□□□□ -0.72
SPO23YBR250W DCD1P06773 312 aa10.55□□□□□ -0.72
SPO23YBR250W MAP2P38174 421 aaKnown RBP10.55□□□□□ -0.72
SPO23YBR250W UBP10P53874 792 aaPredicted RBP10.55□□□□□ -0.72
SPO23YBR250W RIM101P33400 625 aa10.47□□□□□ -0.73
SPO23YBR250W SCY1P53009 804 aa10.3□□□□□ -0.76
SPO23YBR250W BCH2P36122 765 aa10.23□□□□□ -0.77
SPO23YBR250W BUD31P25337 157 aaPredicted RBP10.18□□□□□ -0.78
SPO23YBR250W SLX5P32828 619 aaKnown RBP10.17□□□□□ -0.78
SPO23YBR250W OXP1P28273 1286 aa10.12□□□□□ -0.79
SPO23YBR250W TIF4632P39936 914 aaKnown RBP10.1□□□□□ -0.79
SPO23YBR250W TGL3P40308 642 aa10.09□□□□□ -0.79
SPO23YBR250W EPS1P40557 701 aa9.95□□□□□ -0.82
SPO23YBR250W BDF1P35817 686 aa9.92□□□□□ -0.82
SPO23YBR250W PTP3P40048 928 aa9.92□□□□□ -0.82
SPO23YBR250W YIL055CP40523 627 aaKnown RBP9.92□□□□□ -0.82
SPO23YBR250W TFA1P36100 482 aa9.8□□□□□ -0.84
SPO23YBR250W UBP9P39967 754 aa9.8□□□□□ -0.84
SPO23YBR250W RSM7P47150 247 aa9.8□□□□□ -0.84
SPO23YBR250W YAH1Q12184 172 aaKnown RBP9.77□□□□□ -0.85
SPO23YBR250W AI2P03876 854 aa9.72□□□□□ -0.85
SPO23YBR250W BBC1P47068 1157 aa9.71□□□□□ -0.85
SPO23YBR250W SIS1P25294 352 aaKnown RBP9.67□□□□□ -0.86
SPO23YBR250W MST1P07236 462 aa9.66□□□□□ -0.86
SPO23YBR250W YLR271WQ06152 274 aa9.63□□□□□ -0.87
SPO23YBR250W YOR238WQ08634 303 aa9.61□□□□□ -0.87
SPO23YBR250W NSR1P27476 414 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
SPO23YBR250W YBL029C-AQ3E756 94 aa9.52□□□□□ -0.89
SPO23YBR250W YAP5P40574 245 aa9.51□□□□□ -0.89
SPO23YBR250W PSD2P53037 1138 aaKnown RBP9.49□□□□□ -0.89
SPO23YBR250W SSP1P38871 571 aa9.44□□□□□ -0.9
SPO23YBR250W VNX1P42839 908 aa9.42□□□□□ -0.9
SPO23YBR250W MRM1P25270 412 aa9.37□□□□□ -0.91
SPO23YBR250W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
SPO23YBR250W WSC3Q12215 556 aa9.36□□□□□ -0.91
SPO23YBR250W SPP1Q03012 353 aa9.32□□□□□ -0.92
SPO23YBR250W PIB1Q06651 286 aa9.29□□□□□ -0.92
SPO23YBR250W GTT3P39996 337 aa9.29□□□□□ -0.92
SPO23YBR250W CST9Q06032 482 aa9.28□□□□□ -0.92
SPO23YBR250W TIF11P38912 153 aaKnown RBP9.24□□□□□ -0.93
SPO23YBR250W MGA2P40578 1113 aa9.22□□□□□ -0.93
SPO23YBR250W VPS29P38759 282 aa9.19□□□□□ -0.94
SPO23YBR250W RTG3P38165 486 aa9.15□□□□□ -0.95
SPO23YBR250W YMR1P47147 688 aaKnown RBP RIP-Chip data9.15□□□□□ -0.95not detected
SPO23YBR250W AIR2Q12476 344 aaKnown RBP9.14□□□□□ -0.95
SPO23YBR250W DBP1P24784 617 aaKnown RBP9.12□□□□□ -0.95
SPO23YBR250W FKH1P40466 484 aa9.12□□□□□ -0.95
SPO23YBR250W ULI1P43604 169 aa9.12□□□□□ -0.95
SPO23YBR250W YFR006WP43590 535 aa9.11□□□□□ -0.95
SPO23YBR250W IOC2Q12072 812 aa9.11□□□□□ -0.95
SPO23YBR250W LDB19Q12502 818 aa9.09□□□□□ -0.95
SPO23YBR250W STS1P38637 319 aa9.08□□□□□ -0.96
SPO23YBR250W RCR1P38212 213 aa9.07□□□□□ -0.96
SPO23YBR250W MSB4Q12317 492 aa9.07□□□□□ -0.96
SPO23YBR250W YOL036WQ08206 761 aa9.05□□□□□ -0.96
SPO23YBR250W SET4P42948 560 aa9.04□□□□□ -0.96
SPO23YBR250W VMA1P17255 1071 aaKnown RBP9.03□□□□□ -0.96
SPO23YBR250W YJL171CP46992 396 aa9.02□□□□□ -0.97
SPO23YBR250W EAP1P36041 632 aaKnown RBP9.01□□□□□ -0.97
SPO23YBR250W TRP5P00931 707 aaKnown RBP8.98□□□□□ -0.97
SPO23YBR250W SAM3Q08986 587 aa8.98□□□□□ -0.97
SPO23YBR250W RTG1P32607 177 aa8.93□□□□□ -0.98
SPO23YBR250W BMT6Q12291 365 aa8.91□□□□□ -0.98
SPO23YBR250W YNL035CP53962 389 aaKnown RBP8.87□□□□□ -0.99
SPO23YBR250W NCR1Q12200 1170 aa8.86□□□□□ -0.99
SPO23YBR250W SEC61P32915 480 aa8.84□□□□□ -0.99
SPO23YBR250W GYP5Q12344 894 aa8.84□□□□□ -0.99
SPO23YBR250W ABP1P15891 592 aaKnown RBP8.79□□□□□ -1
SPO23YBR250W DAN4P47179 1161 aa8.79□□□□□ -1
SPO23YBR250W DCW1P36091 449 aa8.78□□□□□ -1
SPO23YBR250W RAM2P29703 316 aa8.77□□□□□ -1.01
SPO23YBR250W HTA1P04911 132 aaKnown RBP8.76□□□□□ -1.01
SPO23YBR250W HTA2P04912 132 aa8.76□□□□□ -1.01
SPO23YBR250W JIP4Q03361 876 aa8.76□□□□□ -1.01
SPO23YBR250W MAK11P20484 414 aaKnown RBP8.73□□□□□ -1.01
SPO23YBR250W YEL023CP39992 682 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms