RNA–Protein interactions for RNA: YBR224W

YBR224W, Transcript of Dubious open reading frame, yeast

Gene YBR224W, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR224W	YBR224W	FAP1	P53971	965 aa		9.47	□□□□□ -0.89
YBR224W	YBR224W	MTC1	P47018	478 aa	Known RBP	9.38	□□□□□ -0.91
YBR224W	YBR224W	PRY3	P47033	881 aa		8.94	□□□□□ -0.98
YBR224W	YBR224W	YCK3	P39962	524 aa		8.42	□□□□□ -1.06
YBR224W	YBR224W	AAD16	Q02895	342 aa		8.4	□□□□□ -1.06
YBR224W	YBR224W	PRI1	P10363	409 aa		8.31	□□□□□ -1.08
YBR224W	YBR224W	HAA1	Q12753	694 aa	Known RBP	8.3	□□□□□ -1.08
YBR224W	YBR224W	DRS1	P32892	752 aa	Known RBP	8.25	□□□□□ -1.09
YBR224W	YBR224W	ISW2	Q08773	1120 aa		7.89	□□□□□ -1.15
YBR224W	YBR224W	RPG1	P38249	964 aa	Known RBP	7.84	□□□□□ -1.15
YBR224W	YBR224W	TSR3	Q12094	313 aa	Known RBP	7.83	□□□□□ -1.16
YBR224W	YBR224W	MRPL32	P25348	183 aa		7.5	□□□□□ -1.21
YBR224W	YBR224W	YGL015C	P33199	130 aa		7.49	□□□□□ -1.21
YBR224W	YBR224W	DIP2	Q12220	943 aa	Predicted RBP	7.42	□□□□□ -1.22
YBR224W	YBR224W	BUD31	P25337	157 aa	Predicted RBP	7.33	□□□□□ -1.24
YBR224W	YBR224W	RSE1	Q04693	1361 aa	Known RBP	7.32	□□□□□ -1.24
YBR224W	YBR224W	RPL17A	P05740	184 aa	Known RBP	7.13	□□□□□ -1.27
YBR224W	YBR224W	REB1	P21538	810 aa		7.13	□□□□□ -1.27
YBR224W	YBR224W	RPL17B	P46990	184 aa	Known RBP	7.13	□□□□□ -1.27
YBR224W	YBR224W	AVT3	P36062	692 aa		7	□□□□□ -1.29
YBR224W	YBR224W	CDC27	P38042	758 aa		7	□□□□□ -1.29
YBR224W	YBR224W	SIS1	P25294	352 aa	Known RBP	6.9	□□□□□ -1.3
YBR224W	YBR224W	MAP2	P38174	421 aa	Known RBP	6.85	□□□□□ -1.31
YBR224W	YBR224W	YKR023W	P36119	530 aa	Known RBP	6.84	□□□□□ -1.31
YBR224W	YBR224W	UBP10	P53874	792 aa	Predicted RBP	6.83	□□□□□ -1.32
YBR224W	YBR224W	SPT21	P35209	758 aa		6.77	□□□□□ -1.33
YBR224W	YBR224W	DCD1	P06773	312 aa		6.72	□□□□□ -1.33
YBR224W	YBR224W	HO	P09932	586 aa		6.71	□□□□□ -1.34
YBR224W	YBR224W	UBP9	P39967	754 aa		6.7	□□□□□ -1.34
YBR224W	YBR224W	TFC8	Q12308	588 aa		6.68	□□□□□ -1.34
YBR224W	YBR224W	BFR2	Q06631	534 aa	Known RBP	6.61	□□□□□ -1.35
YBR224W	YBR224W	SCY1	P53009	804 aa		6.59	□□□□□ -1.35
YBR224W	YBR224W	TGL3	P40308	642 aa		6.58	□□□□□ -1.36
YBR224W	YBR224W	TIF4632	P39936	914 aa	Known RBP	6.57	□□□□□ -1.36
YBR224W	YBR224W	SLX5	P32828	619 aa	Known RBP	6.52	□□□□□ -1.37
YBR224W	YBR224W	BCH2	P36122	765 aa		6.45	□□□□□ -1.38
YBR224W	YBR224W	RIM101	P33400	625 aa		6.43	□□□□□ -1.38
YBR224W	YBR224W	YBL029C-A	Q3E756	94 aa		6.26	□□□□□ -1.41
YBR224W	YBR224W	EPS1	P40557	701 aa		6.25	□□□□□ -1.41
YBR224W	YBR224W	BDF1	P35817	686 aa		6.23	□□□□□ -1.41
YBR224W	YBR224W	OXP1	P28273	1286 aa		6.22	□□□□□ -1.41
YBR224W	YBR224W	MST1	P07236	462 aa		6.21	□□□□□ -1.42
YBR224W	YBR224W	YOR238W	Q08634	303 aa		6.17	□□□□□ -1.42
YBR224W	YBR224W	VNX1	P42839	908 aa		6.14	□□□□□ -1.43
YBR224W	YBR224W	YIL055C	P40523	627 aa	Known RBP	6.12	□□□□□ -1.43
YBR224W	YBR224W	PTP3	P40048	928 aa		6.11	□□□□□ -1.43
YBR224W	YBR224W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
YBR224W	YBR224W	YJL171C	P46992	396 aa		6.08	□□□□□ -1.44
YBR224W	YBR224W	SPP1	Q03012	353 aa		6.08	□□□□□ -1.44
YBR224W	YBR224W	AIR2	Q12476	344 aa	Known RBP	6.07	□□□□□ -1.44
YBR224W	YBR224W	YAP5	P40574	245 aa		6.05	□□□□□ -1.44
YBR224W	YBR224W	BBC1	P47068	1157 aa		6.05	□□□□□ -1.44
YBR224W	YBR224W	RSM7	P47150	247 aa		6.02	□□□□□ -1.45
YBR224W	YBR224W	WSC3	Q12215	556 aa		6.02	□□□□□ -1.45
YBR224W	YBR224W	AI2	P03876	854 aa		6	□□□□□ -1.45
YBR224W	YBR224W	FKH1	P40466	484 aa		5.99	□□□□□ -1.45
YBR224W	YBR224W	YAH1	Q12184	172 aa	Known RBP	5.96	□□□□□ -1.46
YBR224W	YBR224W	TIF11	P38912	153 aa	Known RBP	5.95	□□□□□ -1.46
YBR224W	YBR224W	GTT3	P39996	337 aa		5.92	□□□□□ -1.46
YBR224W	YBR224W	BMT6	Q12291	365 aa		5.89	□□□□□ -1.47
YBR224W	YBR224W	PIB1	Q06651	286 aa		5.86	□□□□□ -1.47
YBR224W	YBR224W	LDB19	Q12502	818 aa		5.86	□□□□□ -1.47
YBR224W	YBR224W	ULI1	P43604	169 aa		5.85	□□□□□ -1.47
YBR224W	YBR224W	IOC2	Q12072	812 aa		5.84	□□□□□ -1.47
YBR224W	YBR224W	YLR271W	Q06152	274 aa		5.83	□□□□□ -1.48
YBR224W	YBR224W	PSD2	P53037	1138 aa	Known RBP	5.79	□□□□□ -1.48
YBR224W	YBR224W	MSB4	Q12317	492 aa		5.78	□□□□□ -1.48
YBR224W	YBR224W	MRM1	P25270	412 aa		5.77	□□□□□ -1.49
YBR224W	YBR224W	EAP1	P36041	632 aa	Known RBP	5.76	□□□□□ -1.49
YBR224W	YBR224W	TFA1	P36100	482 aa		5.72	□□□□□ -1.49
YBR224W	YBR224W	RTG1	P32607	177 aa		5.71	□□□□□ -1.5
YBR224W	YBR224W	NCR1	Q12200	1170 aa		5.71	□□□□□ -1.5
YBR224W	YBR224W	TRP5	P00931	707 aa	Known RBP	5.7	□□□□□ -1.5
YBR224W	YBR224W	SET4	P42948	560 aa		5.7	□□□□□ -1.5
YBR224W	YBR224W	YOL036W	Q08206	761 aa		5.7	□□□□□ -1.5
YBR224W	YBR224W	YNL035C	P53962	389 aa	Known RBP	5.67	□□□□□ -1.5
YBR224W	YBR224W	DBP1	P24784	617 aa	Known RBP	5.66	□□□□□ -1.5
YBR224W	YBR224W	SEC61	P32915	480 aa		5.66	□□□□□ -1.5
YBR224W	YBR224W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
YBR224W	YBR224W	VPS29	P38759	282 aa		5.65	□□□□□ -1.5
YBR224W	YBR224W	YFR006W	P43590	535 aa		5.65	□□□□□ -1.5
YBR224W	YBR224W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
YBR224W	YBR224W	SSP1	P38871	571 aa		5.63	□□□□□ -1.51
YBR224W	YBR224W	VMA1	P17255	1071 aa	Known RBP	5.62	□□□□□ -1.51
YBR224W	YBR224W	SAM3	Q08986	587 aa		5.62	□□□□□ -1.51
YBR224W	YBR224W	RTG3	P38165	486 aa		5.61	□□□□□ -1.51
YBR224W	YBR224W	CST9	Q06032	482 aa		5.61	□□□□□ -1.51
YBR224W	YBR224W	STS1	P38637	319 aa		5.6	□□□□□ -1.51
YBR224W	YBR224W	TFG1	P41895	735 aa	Predicted RBP	5.6	□□□□□ -1.51
YBR224W	YBR224W	BCK2	P33306	851 aa		5.57	□□□□□ -1.52
YBR224W	YBR224W	JIP4	Q03361	876 aa		5.56	□□□□□ -1.52
YBR224W	YBR224W	SAP30	P38429	201 aa		5.55	□□□□□ -1.52
YBR224W	YBR224W	MGA2	P40578	1113 aa		5.55	□□□□□ -1.52
YBR224W	YBR224W	DAN4	P47179	1161 aa		5.55	□□□□□ -1.52
YBR224W	YBR224W	ABP1	P15891	592 aa	Known RBP	5.53	□□□□□ -1.52
YBR224W	YBR224W	RCR1	P38212	213 aa		5.53	□□□□□ -1.52
YBR224W	YBR224W	CHL1	P22516	861 aa	Predicted RBP	5.52	□□□□□ -1.53
YBR224W	YBR224W	RGA2	Q06407	1009 aa		5.52	□□□□□ -1.53
YBR224W	YBR224W	YDL129W	Q07555	291 aa		5.52	□□□□□ -1.53
YBR224W	YBR224W	GYP5	Q12344	894 aa		5.51	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms