RNA–Protein interactions for RNA: YBR216C

YBP1, Transcript of Protein involved in cellular response to oxidative stress, yeastyeast

Gene YBP1, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBP1YBR216C MTC1P47018 478 aaKnown RBP10.41□□□□□ -0.74
YBP1YBR216C DRS1P32892 752 aaKnown RBP9.67□□□□□ -0.86
YBP1YBR216C FAP1P53971 965 aa9.46□□□□□ -0.89
YBP1YBR216C PRY3P47033 881 aa8.88□□□□□ -0.99
YBP1YBR216C PRI1P10363 409 aa8.8□□□□□ -1
YBP1YBR216C AAD16Q02895 342 aa8.77□□□□□ -1.01
YBP1YBR216C ISW2Q08773 1120 aa8.66□□□□□ -1.02
YBP1YBR216C RPG1P38249 964 aaKnown RBP8.56□□□□□ -1.04
YBP1YBR216C DIP2Q12220 943 aaPredicted RBP8.49□□□□□ -1.05
YBP1YBR216C YCK3P39962 524 aa8.34□□□□□ -1.07
YBP1YBR216C HAA1Q12753 694 aaKnown RBP8.33□□□□□ -1.08
YBP1YBR216C TSR3Q12094 313 aaKnown RBP8.32□□□□□ -1.08
YBP1YBR216C RSE1Q04693 1361 aaKnown RBP8.24□□□□□ -1.09
YBP1YBR216C AVT3P36062 692 aa8.15□□□□□ -1.11
YBP1YBR216C MRPL32P25348 183 aa8.02□□□□□ -1.13
YBP1YBR216C BFR2Q06631 534 aaKnown RBP8.02□□□□□ -1.13
YBP1YBR216C RPL17AP05740 184 aaKnown RBP7.98□□□□□ -1.13
YBP1YBR216C RPL17BP46990 184 aaKnown RBP7.98□□□□□ -1.13
YBP1YBR216C REB1P21538 810 aa7.96□□□□□ -1.13
YBP1YBR216C YGL015CP33199 130 aa7.7□□□□□ -1.18
YBP1YBR216C SPT21P35209 758 aa7.61□□□□□ -1.19
YBP1YBR216C CDC27P38042 758 aa7.58□□□□□ -1.2
YBP1YBR216C YKR023WP36119 530 aaKnown RBP7.54□□□□□ -1.2
YBP1YBR216C HOP09932 586 aa7.4□□□□□ -1.23
YBP1YBR216C TFC8Q12308 588 aa7.39□□□□□ -1.23
YBP1YBR216C UBP10P53874 792 aaPredicted RBP7.39□□□□□ -1.23
YBP1YBR216C DCD1P06773 312 aa7.36□□□□□ -1.23
YBP1YBR216C MAP2P38174 421 aaKnown RBP7.35□□□□□ -1.23
YBP1YBR216C RIM101P33400 625 aa7.34□□□□□ -1.24
YBP1YBR216C SCY1P53009 804 aa7.21□□□□□ -1.26
YBP1YBR216C BCH2P36122 765 aa7.14□□□□□ -1.27
YBP1YBR216C SLX5P32828 619 aaKnown RBP7.13□□□□□ -1.27
YBP1YBR216C TIF4632P39936 914 aaKnown RBP7.1□□□□□ -1.27
YBP1YBR216C OXP1P28273 1286 aa7.08□□□□□ -1.28
YBP1YBR216C BUD31P25337 157 aaPredicted RBP7.07□□□□□ -1.28
YBP1YBR216C TGL3P40308 642 aa7.05□□□□□ -1.28
YBP1YBR216C YIL055CP40523 627 aaKnown RBP7.01□□□□□ -1.29
YBP1YBR216C PTP3P40048 928 aa7.01□□□□□ -1.29
YBP1YBR216C TFA1P36100 482 aa6.98□□□□□ -1.29
YBP1YBR216C EPS1P40557 701 aa6.98□□□□□ -1.29
YBP1YBR216C BDF1P35817 686 aa6.94□□□□□ -1.3
YBP1YBR216C RSM7P47150 247 aa6.89□□□□□ -1.31
YBP1YBR216C YAH1Q12184 172 aaKnown RBP6.89□□□□□ -1.31
YBP1YBR216C UBP9P39967 754 aa6.88□□□□□ -1.31
YBP1YBR216C BBC1P47068 1157 aa6.86□□□□□ -1.31
YBP1YBR216C AI2P03876 854 aa6.83□□□□□ -1.32
YBP1YBR216C SIS1P25294 352 aaKnown RBP6.76□□□□□ -1.33
YBP1YBR216C YLR271WQ06152 274 aa6.75□□□□□ -1.33
YBP1YBR216C YOR238WQ08634 303 aa6.74□□□□□ -1.33
YBP1YBR216C MST1P07236 462 aa6.72□□□□□ -1.33
YBP1YBR216C NSR1P27476 414 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
YBP1YBR216C YAP5P40574 245 aa6.69□□□□□ -1.34
YBP1YBR216C SSP1P38871 571 aa6.67□□□□□ -1.34
YBP1YBR216C PSD2P53037 1138 aaKnown RBP6.66□□□□□ -1.34
YBP1YBR216C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35not detected
YBP1YBR216C YBL029C-AQ3E756 94 aa6.65□□□□□ -1.35
YBP1YBR216C MRM1P25270 412 aa6.59□□□□□ -1.36
YBP1YBR216C VNX1P42839 908 aa6.57□□□□□ -1.36
YBP1YBR216C GTT3P39996 337 aa6.56□□□□□ -1.36
YBP1YBR216C WSC3Q12215 556 aa6.56□□□□□ -1.36
YBP1YBR216C SPP1Q03012 353 aa6.53□□□□□ -1.36
YBP1YBR216C MGA2P40578 1113 aa6.51□□□□□ -1.37
YBP1YBR216C CST9Q06032 482 aa6.51□□□□□ -1.37
YBP1YBR216C PIB1Q06651 286 aa6.51□□□□□ -1.37
YBP1YBR216C TIF11P38912 153 aaKnown RBP6.47□□□□□ -1.37
YBP1YBR216C RTG3P38165 486 aa6.44□□□□□ -1.38
YBP1YBR216C YMR1P47147 688 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
YBP1YBR216C VPS29P38759 282 aa6.42□□□□□ -1.38
YBP1YBR216C DBP1P24784 617 aaKnown RBP6.41□□□□□ -1.38
YBP1YBR216C ULI1P43604 169 aa6.4□□□□□ -1.39
YBP1YBR216C YFR006WP43590 535 aa6.39□□□□□ -1.39
YBP1YBR216C MSB4Q12317 492 aa6.38□□□□□ -1.39
YBP1YBR216C FKH1P40466 484 aa6.37□□□□□ -1.39
YBP1YBR216C AIR2Q12476 344 aaKnown RBP6.37□□□□□ -1.39
YBP1YBR216C STS1P38637 319 aa6.36□□□□□ -1.39
YBP1YBR216C LDB19Q12502 818 aa6.36□□□□□ -1.39
YBP1YBR216C RCR1P38212 213 aa6.35□□□□□ -1.39
YBP1YBR216C YOL036WQ08206 761 aa6.35□□□□□ -1.39
YBP1YBR216C EAP1P36041 632 aaKnown RBP6.35□□□□□ -1.39
YBP1YBR216C IOC2Q12072 812 aa6.35□□□□□ -1.39
YBP1YBR216C SET4P42948 560 aa6.34□□□□□ -1.39
YBP1YBR216C YJL171CP46992 396 aa6.34□□□□□ -1.39
YBP1YBR216C VMA1P17255 1071 aaKnown RBP6.33□□□□□ -1.4
YBP1YBR216C SAM3Q08986 587 aa6.3□□□□□ -1.4
YBP1YBR216C TRP5P00931 707 aaKnown RBP6.29□□□□□ -1.4
YBP1YBR216C RTG1P32607 177 aa6.26□□□□□ -1.41
YBP1YBR216C BMT6Q12291 365 aa6.25□□□□□ -1.41
YBP1YBR216C YNL035CP53962 389 aaKnown RBP6.23□□□□□ -1.41
YBP1YBR216C GYP5Q12344 894 aa6.22□□□□□ -1.41
YBP1YBR216C NCR1Q12200 1170 aa6.21□□□□□ -1.41
YBP1YBR216C ABP1P15891 592 aaKnown RBP6.21□□□□□ -1.42
YBP1YBR216C SEC61P32915 480 aa6.2□□□□□ -1.42
YBP1YBR216C DCW1P36091 449 aa6.18□□□□□ -1.42
YBP1YBR216C HTA1P04911 132 aaKnown RBP6.17□□□□□ -1.42
YBP1YBR216C HTA2P04912 132 aa6.17□□□□□ -1.42
YBP1YBR216C RAM2P29703 316 aa6.16□□□□□ -1.42
YBP1YBR216C JIP4Q03361 876 aa6.16□□□□□ -1.42
YBP1YBR216C MAK11P20484 414 aaKnown RBP6.16□□□□□ -1.42
YBP1YBR216C TFG1P41895 735 aaPredicted RBP6.16□□□□□ -1.42
YBP1YBR216C MIF2P35201 549 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms