RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeastyeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMP1YBR182C MTC1P47018 478 aaKnown RBP15.04■□□□□ -0
SMP1YBR182C DRS1P32892 752 aaKnown RBP13.95□□□□□ -0.18
SMP1YBR182C FAP1P53971 965 aa13.81□□□□□ -0.2
SMP1YBR182C PRY3P47033 881 aa12.98□□□□□ -0.33
SMP1YBR182C PRI1P10363 409 aa12.8□□□□□ -0.36
SMP1YBR182C AAD16Q02895 342 aa12.76□□□□□ -0.37
SMP1YBR182C ISW2Q08773 1120 aa12.54□□□□□ -0.4
SMP1YBR182C RPG1P38249 964 aaKnown RBP12.39□□□□□ -0.43
SMP1YBR182C DIP2Q12220 943 aaPredicted RBP12.25□□□□□ -0.45
SMP1YBR182C YCK3P39962 524 aa12.21□□□□□ -0.45
SMP1YBR182C HAA1Q12753 694 aaKnown RBP12.17□□□□□ -0.46
SMP1YBR182C TSR3Q12094 313 aaKnown RBP12.09□□□□□ -0.47
SMP1YBR182C RSE1Q04693 1361 aaKnown RBP11.89□□□□□ -0.51
SMP1YBR182C AVT3P36062 692 aa11.67□□□□□ -0.54
SMP1YBR182C MRPL32P25348 183 aa11.63□□□□□ -0.55
SMP1YBR182C BFR2Q06631 534 aaKnown RBP11.57□□□□□ -0.56
SMP1YBR182C REB1P21538 810 aa11.54□□□□□ -0.56
SMP1YBR182C RPL17AP05740 184 aaKnown RBP11.51□□□□□ -0.57
SMP1YBR182C RPL17BP46990 184 aaKnown RBP11.51□□□□□ -0.57
SMP1YBR182C YGL015CP33199 130 aa11.2□□□□□ -0.62
SMP1YBR182C CDC27P38042 758 aa10.99□□□□□ -0.65
SMP1YBR182C SPT21P35209 758 aa10.98□□□□□ -0.65
SMP1YBR182C YKR023WP36119 530 aaKnown RBP10.9□□□□□ -0.66
SMP1YBR182C TFA1P36100 482 aa10.76□□□□□ -0.69
SMP1YBR182C UBP10P53874 792 aaPredicted RBP10.74□□□□□ -0.69
SMP1YBR182C BUD31P25337 157 aaPredicted RBP10.72□□□□□ -0.69
SMP1YBR182C HOP09932 586 aa10.68□□□□□ -0.7
SMP1YBR182C MAP2P38174 421 aaKnown RBP10.68□□□□□ -0.7
SMP1YBR182C TFC8Q12308 588 aa10.68□□□□□ -0.7
SMP1YBR182C DCD1P06773 312 aa10.64□□□□□ -0.71
SMP1YBR182C RIM101P33400 625 aa10.53□□□□□ -0.72
SMP1YBR182C SCY1P53009 804 aa10.43□□□□□ -0.74
SMP1YBR182C SLX5P32828 619 aaKnown RBP10.32□□□□□ -0.76
SMP1YBR182C BCH2P36122 765 aa10.32□□□□□ -0.76
SMP1YBR182C TIF4632P39936 914 aaKnown RBP10.31□□□□□ -0.76
SMP1YBR182C TGL3P40308 642 aa10.24□□□□□ -0.77
SMP1YBR182C YIL055CP40523 627 aaKnown RBP10.2□□□□□ -0.78
SMP1YBR182C RQC2Q12532 1038 aaKnown RBP10.19□□□□□ -0.78
SMP1YBR182C OXP1P28273 1286 aa10.17□□□□□ -0.78
SMP1YBR182C PTP3P40048 928 aa10.15□□□□□ -0.78
SMP1YBR182C EPS1P40557 701 aa10.06□□□□□ -0.8
SMP1YBR182C BDF1P35817 686 aa10.01□□□□□ -0.81
SMP1YBR182C UBP9P39967 754 aa10.01□□□□□ -0.81
SMP1YBR182C SIS1P25294 352 aaKnown RBP10□□□□□ -0.81
SMP1YBR182C BBC1P47068 1157 aa9.96□□□□□ -0.82
SMP1YBR182C YAH1Q12184 172 aaKnown RBP9.96□□□□□ -0.82
SMP1YBR182C RSM7P47150 247 aa9.93□□□□□ -0.82
SMP1YBR182C AI2P03876 854 aa9.85□□□□□ -0.83
SMP1YBR182C MST1P07236 462 aa9.77□□□□□ -0.84
SMP1YBR182C YOR238WQ08634 303 aa9.75□□□□□ -0.85
SMP1YBR182C NSR1P27476 414 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
SMP1YBR182C YLR271WQ06152 274 aa9.68□□□□□ -0.86
SMP1YBR182C YBL029C-AQ3E756 94 aa9.67□□□□□ -0.86
SMP1YBR182C YAP5P40574 245 aa9.66□□□□□ -0.86
SMP1YBR182C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.65□□□□□ -0.86not detected
SMP1YBR182C SSP1P38871 571 aa9.62□□□□□ -0.87
SMP1YBR182C PSD2P53037 1138 aaKnown RBP9.57□□□□□ -0.88
SMP1YBR182C VNX1P42839 908 aa9.55□□□□□ -0.88
SMP1YBR182C GTT3P39996 337 aa9.51□□□□□ -0.89
SMP1YBR182C WSC3Q12215 556 aa9.5□□□□□ -0.89
SMP1YBR182C MRM1P25270 412 aa9.49□□□□□ -0.89
SMP1YBR182C SPP1Q03012 353 aa9.48□□□□□ -0.89
SMP1YBR182C MGA2P40578 1113 aa9.39□□□□□ -0.91
SMP1YBR182C TAF7Q05021 590 aa9.38□□□□□ -0.91
SMP1YBR182C PIB1Q06651 286 aa9.38□□□□□ -0.91
SMP1YBR182C TIF11P38912 153 aaKnown RBP9.37□□□□□ -0.91
SMP1YBR182C CST9Q06032 482 aa9.33□□□□□ -0.92
SMP1YBR182C RTG3P38165 486 aa9.32□□□□□ -0.92
SMP1YBR182C FKH1P40466 484 aa9.28□□□□□ -0.92
SMP1YBR182C YMR1P47147 688 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
SMP1YBR182C AIR2Q12476 344 aaKnown RBP9.26□□□□□ -0.93
SMP1YBR182C ULI1P43604 169 aa9.25□□□□□ -0.93
SMP1YBR182C YJL171CP46992 396 aa9.25□□□□□ -0.93
SMP1YBR182C DBP1P24784 617 aaKnown RBP9.24□□□□□ -0.93
SMP1YBR182C VPS29P38759 282 aa9.24□□□□□ -0.93
SMP1YBR182C LDB19Q12502 818 aa9.24□□□□□ -0.93
SMP1YBR182C MSB4Q12317 492 aa9.23□□□□□ -0.93
SMP1YBR182C DMA1P38823 416 aa9.21□□□□□ -0.94
SMP1YBR182C IOC2Q12072 812 aa9.21□□□□□ -0.94
SMP1YBR182C EAP1P36041 632 aaKnown RBP9.2□□□□□ -0.94
SMP1YBR182C YFR006WP43590 535 aa9.2□□□□□ -0.94
SMP1YBR182C YOL036WQ08206 761 aa9.18□□□□□ -0.94
SMP1YBR182C STS1P38637 319 aa9.16□□□□□ -0.94
SMP1YBR182C SET4P42948 560 aa9.15□□□□□ -0.94
SMP1YBR182C VMA1P17255 1071 aaKnown RBP9.12□□□□□ -0.95
SMP1YBR182C RCR1P38212 213 aa9.12□□□□□ -0.95
SMP1YBR182C TRP5P00931 707 aaKnown RBP9.09□□□□□ -0.95
SMP1YBR182C BMT6Q12291 365 aa9.09□□□□□ -0.95
SMP1YBR182C SAM3Q08986 587 aa9.08□□□□□ -0.96
SMP1YBR182C RTG1P32607 177 aa9.06□□□□□ -0.96
SMP1YBR182C YNL035CP53962 389 aaKnown RBP9.01□□□□□ -0.97
SMP1YBR182C NCR1Q12200 1170 aa9.01□□□□□ -0.97
SMP1YBR182C TFG1P41895 735 aaPredicted RBP9□□□□□ -0.97
SMP1YBR182C GYP5Q12344 894 aa8.99□□□□□ -0.97
SMP1YBR182C ABP1P15891 592 aaKnown RBP8.98□□□□□ -0.97
SMP1YBR182C SEC61P32915 480 aa8.98□□□□□ -0.97
SMP1YBR182C HTA1P04911 132 aaKnown RBP8.93□□□□□ -0.98
SMP1YBR182C HTA2P04912 132 aa8.93□□□□□ -0.98
SMP1YBR182C LEO1P38439 464 aa8.93□□□□□ -0.98
SMP1YBR182C DCW1P36091 449 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms