RNA–Protein interactions for RNA: YBR178W

YBR178W, Transcript of Dubious open reading frame, yeastyeast

Gene YBR178W, Length 375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR178WYBR178W FAP1P53971 965 aa14.75□□□□□ -0.05
YBR178WYBR178W PRY3P47033 881 aa13.94□□□□□ -0.18
YBR178WYBR178W MTC1P47018 478 aaKnown RBP13.49□□□□□ -0.25
YBR178WYBR178W YCK3P39962 524 aa13.01□□□□□ -0.33
YBR178WYBR178W HAA1Q12753 694 aaKnown RBP12.89□□□□□ -0.35
YBR178WYBR178W AAD16Q02895 342 aa12.85□□□□□ -0.35
YBR178WYBR178W PRI1P10363 409 aa12.62□□□□□ -0.39
YBR178WYBR178W TSR3Q12094 313 aaKnown RBP11.87□□□□□ -0.51
YBR178WYBR178W ISW2Q08773 1120 aa11.7□□□□□ -0.54
YBR178WYBR178W RPG1P38249 964 aaKnown RBP11.66□□□□□ -0.54
YBR178WYBR178W BUD31P25337 157 aaPredicted RBP11.53□□□□□ -0.56
YBR178WYBR178W YGL015CP33199 130 aa11.52□□□□□ -0.57
YBR178WYBR178W MRPL32P25348 183 aa11.4□□□□□ -0.58
YBR178WYBR178W SIS1P25294 352 aaKnown RBP10.82□□□□□ -0.68
YBR178WYBR178W DRS1P32892 752 aaKnown RBP10.45□□□□□ -0.74
YBR178WYBR178W CDC27P38042 758 aa10.42□□□□□ -0.74
YBR178WYBR178W MAP2P38174 421 aaKnown RBP10.36□□□□□ -0.75
YBR178WYBR178W UBP9P39967 754 aa10.36□□□□□ -0.75
YBR178WYBR178W UBP10P53874 792 aaPredicted RBP10.36□□□□□ -0.75
YBR178WYBR178W REB1P21538 810 aa10.24□□□□□ -0.77
YBR178WYBR178W RSE1Q04693 1361 aaKnown RBP10.23□□□□□ -0.77
YBR178WYBR178W RPL17AP05740 184 aaKnown RBP10.06□□□□□ -0.8
YBR178WYBR178W RPL17BP46990 184 aaKnown RBP10.06□□□□□ -0.8
YBR178WYBR178W TIF4632P39936 914 aaKnown RBP10□□□□□ -0.81
YBR178WYBR178W TGL3P40308 642 aa9.96□□□□□ -0.82
YBR178WYBR178W DIP2Q12220 943 aaPredicted RBP9.94□□□□□ -0.82
YBR178WYBR178W YKR023WP36119 530 aaKnown RBP9.84□□□□□ -0.83
YBR178WYBR178W SCY1P53009 804 aa9.77□□□□□ -0.85
YBR178WYBR178W SLX5P32828 619 aaKnown RBP9.75□□□□□ -0.85
YBR178WYBR178W DCD1P06773 312 aa9.73□□□□□ -0.85
YBR178WYBR178W HOP09932 586 aa9.69□□□□□ -0.86
YBR178WYBR178W TFC8Q12308 588 aa9.63□□□□□ -0.87
YBR178WYBR178W YBL029C-AQ3E756 94 aa9.54□□□□□ -0.88
YBR178WYBR178W SPT21P35209 758 aa9.4□□□□□ -0.9
YBR178WYBR178W YJL171CP46992 396 aa9.35□□□□□ -0.91
YBR178WYBR178W VNX1P42839 908 aa9.3□□□□□ -0.92
YBR178WYBR178W AIR2Q12476 344 aaKnown RBP9.26□□□□□ -0.93
YBR178WYBR178W MST1P07236 462 aa9.25□□□□□ -0.93
YBR178WYBR178W BCH2P36122 765 aa9.25□□□□□ -0.93
YBR178WYBR178W SPP1Q03012 353 aa9.24□□□□□ -0.93
YBR178WYBR178W YOR238WQ08634 303 aa9.15□□□□□ -0.94
YBR178WYBR178W FKH1P40466 484 aa9.12□□□□□ -0.95
YBR178WYBR178W WSC3Q12215 556 aa9.07□□□□□ -0.96
YBR178WYBR178W BMT6Q12291 365 aa9□□□□□ -0.97
YBR178WYBR178W TIF11P38912 153 aaKnown RBP8.95□□□□□ -0.98
YBR178WYBR178W AVT3P36062 692 aa8.92□□□□□ -0.98
YBR178WYBR178W BDF1P35817 686 aa8.88□□□□□ -0.99
YBR178WYBR178W LDB19Q12502 818 aa8.86□□□□□ -0.99
YBR178WYBR178W EPS1P40557 701 aa8.85□□□□□ -0.99
YBR178WYBR178W NSR1P27476 414 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
YBR178WYBR178W YAP5P40574 245 aa8.77□□□□□ -1.01
YBR178WYBR178W RGA2Q06407 1009 aa8.77□□□□□ -1.01
YBR178WYBR178W ULI1P43604 169 aa8.72□□□□□ -1.01
YBR178WYBR178W IOC2Q12072 812 aa8.7□□□□□ -1.02
YBR178WYBR178W GTT3P39996 337 aa8.68□□□□□ -1.02
YBR178WYBR178W RIM101P33400 625 aa8.59□□□□□ -1.03
YBR178WYBR178W BCK2P33306 851 aa8.49□□□□□ -1.05
YBR178WYBR178W RTG1P32607 177 aa8.48□□□□□ -1.05
YBR178WYBR178W NCR1Q12200 1170 aa8.48□□□□□ -1.05
YBR178WYBR178W EAP1P36041 632 aaKnown RBP8.36□□□□□ -1.07
YBR178WYBR178W PIB1Q06651 286 aa8.34□□□□□ -1.07
YBR178WYBR178W MSB4Q12317 492 aa8.33□□□□□ -1.08
YBR178WYBR178W RGA1P39083 1007 aa8.31□□□□□ -1.08
YBR178WYBR178W BBC1P47068 1157 aa8.31□□□□□ -1.08
YBR178WYBR178W TRP5P00931 707 aaKnown RBP8.3□□□□□ -1.08
YBR178WYBR178W SEC61P32915 480 aa8.29□□□□□ -1.08
YBR178WYBR178W PTP3P40048 928 aa8.28□□□□□ -1.08
YBR178WYBR178W YNL035CP53962 389 aaKnown RBP8.27□□□□□ -1.09
YBR178WYBR178W OXP1P28273 1286 aa8.25□□□□□ -1.09
YBR178WYBR178W CHL1P22516 861 aaPredicted RBP8.23□□□□□ -1.09
YBR178WYBR178W SAP30P38429 201 aa8.22□□□□□ -1.09
YBR178WYBR178W TFG1P41895 735 aaPredicted RBP8.22□□□□□ -1.09
YBR178WYBR178W SET4P42948 560 aa8.22□□□□□ -1.09
YBR178WYBR178W YIL055CP40523 627 aaKnown RBP8.18□□□□□ -1.1
YBR178WYBR178W YOL036WQ08206 761 aa8.17□□□□□ -1.1
YBR178WYBR178W AI2P03876 854 aa8.15□□□□□ -1.1
YBR178WYBR178W XDJ1P39102 459 aa8.13□□□□□ -1.11
YBR178WYBR178W PRE3P38624 215 aa8.12□□□□□ -1.11
YBR178WYBR178W DPS1P04802 557 aaKnown RBP8.11□□□□□ -1.11
YBR178WYBR178W VRP1P37370 817 aa8.07□□□□□ -1.12
YBR178WYBR178W RSM7P47150 247 aa8.03□□□□□ -1.12
YBR178WYBR178W YDL129WQ07555 291 aa8.03□□□□□ -1.12
YBR178WYBR178W DAN4P47179 1161 aa7.96□□□□□ -1.14
YBR178WYBR178W SRC1Q03707 834 aa7.92□□□□□ -1.14
YBR178WYBR178W JIP4Q03361 876 aa7.89□□□□□ -1.15
YBR178WYBR178W YDR344CQ05510 147 aa7.79□□□□□ -1.16
YBR178WYBR178W VMA1P17255 1071 aaKnown RBP7.78□□□□□ -1.16
YBR178WYBR178W SAM3Q08986 587 aa7.77□□□□□ -1.17
YBR178WYBR178W YAH1Q12184 172 aaKnown RBP7.77□□□□□ -1.17
YBR178WYBR178W MRM1P25270 412 aa7.76□□□□□ -1.17
YBR178WYBR178W DBP1P24784 617 aaKnown RBP7.75□□□□□ -1.17
YBR178WYBR178W ELP4Q02884 456 aaKnown RBP7.75□□□□□ -1.17
YBR178WYBR178W YFR006WP43590 535 aa7.74□□□□□ -1.17
YBR178WYBR178W YMR1P47147 688 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
YBR178WYBR178W PTC4P38089 393 aa7.69□□□□□ -1.18
YBR178WYBR178W HTA1P04911 132 aaKnown RBP7.66□□□□□ -1.18
YBR178WYBR178W HTA2P04912 132 aa7.66□□□□□ -1.18
YBR178WYBR178W YEL023CP39992 682 aa7.66□□□□□ -1.18
YBR178WYBR178W ABP1P15891 592 aaKnown RBP7.64□□□□□ -1.19
YBR178WYBR178W DCW1P36091 449 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms