RNA–Protein interactions for RNA: YBR172C

SMY2, Transcript of GYF domain protein, yeast

Gene SMY2, Length 2,223 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMY2	YBR172C	MTC1	P47018	478 aa	Known RBP	6.77	□□□□□ -1.33
SMY2	YBR172C	FAP1	P53971	965 aa		6.57	□□□□□ -1.36
SMY2	YBR172C	DRS1	P32892	752 aa	Known RBP	6.27	□□□□□ -1.41
SMY2	YBR172C	PRY3	P47033	881 aa		6.19	□□□□□ -1.42
SMY2	YBR172C	AAD16	Q02895	342 aa		5.82	□□□□□ -1.48
SMY2	YBR172C	YCK3	P39962	524 aa		5.76	□□□□□ -1.49
SMY2	YBR172C	PRI1	P10363	409 aa		5.75	□□□□□ -1.49
SMY2	YBR172C	HAA1	Q12753	694 aa	Known RBP	5.75	□□□□□ -1.49
SMY2	YBR172C	ISW2	Q08773	1120 aa		5.66	□□□□□ -1.5
SMY2	YBR172C	RPG1	P38249	964 aa	Known RBP	5.57	□□□□□ -1.52
SMY2	YBR172C	DIP2	Q12220	943 aa	Predicted RBP	5.51	□□□□□ -1.53
SMY2	YBR172C	TSR3	Q12094	313 aa	Known RBP	5.42	□□□□□ -1.54
SMY2	YBR172C	RSE1	Q04693	1361 aa	Known RBP	5.37	□□□□□ -1.55
SMY2	YBR172C	AVT3	P36062	692 aa		5.25	□□□□□ -1.57
SMY2	YBR172C	MRPL32	P25348	183 aa		5.25	□□□□□ -1.57
SMY2	YBR172C	BFR2	Q06631	534 aa	Known RBP	5.2	□□□□□ -1.58
SMY2	YBR172C	RPL17A	P05740	184 aa	Known RBP	5.2	□□□□□ -1.58
SMY2	YBR172C	REB1	P21538	810 aa		5.2	□□□□□ -1.58
SMY2	YBR172C	RPL17B	P46990	184 aa	Known RBP	5.2	□□□□□ -1.58
SMY2	YBR172C	YGL015C	P33199	130 aa		5.19	□□□□□ -1.58
SMY2	YBR172C	BUD31	P25337	157 aa	Predicted RBP	5.07	□□□□□ -1.6
SMY2	YBR172C	TFA1	P36100	482 aa		5	□□□□□ -1.61
SMY2	YBR172C	SPT21	P35209	758 aa		4.92	□□□□□ -1.62
SMY2	YBR172C	CDC27	P38042	758 aa		4.91	□□□□□ -1.62
SMY2	YBR172C	YKR023W	P36119	530 aa	Known RBP	4.88	□□□□□ -1.63
SMY2	YBR172C	UBP10	P53874	792 aa	Predicted RBP	4.83	□□□□□ -1.64
SMY2	YBR172C	HO	P09932	586 aa		4.8	□□□□□ -1.64
SMY2	YBR172C	TFC8	Q12308	588 aa		4.8	□□□□□ -1.64
SMY2	YBR172C	SIS1	P25294	352 aa	Known RBP	4.78	□□□□□ -1.64
SMY2	YBR172C	MAP2	P38174	421 aa	Known RBP	4.78	□□□□□ -1.64
SMY2	YBR172C	DCD1	P06773	312 aa		4.76	□□□□□ -1.65
SMY2	YBR172C	RIM101	P33400	625 aa		4.74	□□□□□ -1.65
SMY2	YBR172C	SCY1	P53009	804 aa		4.69	□□□□□ -1.66
SMY2	YBR172C	UBP9	P39967	754 aa		4.67	□□□□□ -1.66
SMY2	YBR172C	TIF4632	P39936	914 aa	Known RBP	4.66	□□□□□ -1.66
SMY2	YBR172C	SLX5	P32828	619 aa	Known RBP	4.65	□□□□□ -1.66
SMY2	YBR172C	BCH2	P36122	765 aa		4.62	□□□□□ -1.67
SMY2	YBR172C	TGL3	P40308	642 aa		4.6	□□□□□ -1.67
SMY2	YBR172C	YIL055C	P40523	627 aa	Known RBP	4.57	□□□□□ -1.68
SMY2	YBR172C	OXP1	P28273	1286 aa		4.57	□□□□□ -1.68
SMY2	YBR172C	PTP3	P40048	928 aa		4.56	□□□□□ -1.68
SMY2	YBR172C	EPS1	P40557	701 aa		4.53	□□□□□ -1.68
SMY2	YBR172C	BDF1	P35817	686 aa		4.49	□□□□□ -1.69
SMY2	YBR172C	BBC1	P47068	1157 aa		4.48	□□□□□ -1.69
SMY2	YBR172C	RSM7	P47150	247 aa		4.48	□□□□□ -1.69
SMY2	YBR172C	YAH1	Q12184	172 aa	Known RBP	4.47	□□□□□ -1.69
SMY2	YBR172C	AI2	P03876	854 aa		4.44	□□□□□ -1.7
SMY2	YBR172C	RQC2	Q12532	1038 aa	Known RBP	4.43	□□□□□ -1.7
SMY2	YBR172C	YOR238W	Q08634	303 aa		4.41	□□□□□ -1.7
SMY2	YBR172C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SMY2	YBR172C	MST1	P07236	462 aa		4.37	□□□□□ -1.71
SMY2	YBR172C	YAP5	P40574	245 aa		4.37	□□□□□ -1.71
SMY2	YBR172C	TAF7	Q05021	590 aa		4.36	□□□□□ -1.71
SMY2	YBR172C	YLR271W	Q06152	274 aa		4.36	□□□□□ -1.71
SMY2	YBR172C	YBL029C-A	Q3E756	94 aa		4.35	□□□□□ -1.71
SMY2	YBR172C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
SMY2	YBR172C	SSP1	P38871	571 aa		4.31	□□□□□ -1.72
SMY2	YBR172C	GTT3	P39996	337 aa		4.31	□□□□□ -1.72
SMY2	YBR172C	PSD2	P53037	1138 aa	Known RBP	4.3	□□□□□ -1.72
SMY2	YBR172C	WSC3	Q12215	556 aa		4.29	□□□□□ -1.72
SMY2	YBR172C	VNX1	P42839	908 aa		4.28	□□□□□ -1.72
SMY2	YBR172C	SPP1	Q03012	353 aa		4.27	□□□□□ -1.73
SMY2	YBR172C	MRM1	P25270	412 aa		4.27	□□□□□ -1.73
SMY2	YBR172C	YJL171C	P46992	396 aa		4.25	□□□□□ -1.73
SMY2	YBR172C	TIF11	P38912	153 aa	Known RBP	4.23	□□□□□ -1.73
SMY2	YBR172C	MGA2	P40578	1113 aa		4.22	□□□□□ -1.73
SMY2	YBR172C	PIB1	Q06651	286 aa		4.22	□□□□□ -1.73
SMY2	YBR172C	DMA1	P38823	416 aa		4.21	□□□□□ -1.74
SMY2	YBR172C	AIR2	Q12476	344 aa	Known RBP	4.2	□□□□□ -1.74
SMY2	YBR172C	RTG3	P38165	486 aa		4.19	□□□□□ -1.74
SMY2	YBR172C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SMY2	YBR172C	CST9	Q06032	482 aa		4.19	□□□□□ -1.74
SMY2	YBR172C	ULI1	P43604	169 aa		4.18	□□□□□ -1.74
SMY2	YBR172C	MSB4	Q12317	492 aa		4.17	□□□□□ -1.74
SMY2	YBR172C	FKH1	P40466	484 aa		4.17	□□□□□ -1.74
SMY2	YBR172C	EAP1	P36041	632 aa	Known RBP	4.16	□□□□□ -1.74
SMY2	YBR172C	DBP1	P24784	617 aa	Known RBP	4.15	□□□□□ -1.74
SMY2	YBR172C	VPS29	P38759	282 aa		4.15	□□□□□ -1.75
SMY2	YBR172C	LDB19	Q12502	818 aa		4.15	□□□□□ -1.75
SMY2	YBR172C	YFR006W	P43590	535 aa		4.14	□□□□□ -1.75
SMY2	YBR172C	YOL036W	Q08206	761 aa		4.14	□□□□□ -1.75
SMY2	YBR172C	SET4	P42948	560 aa		4.13	□□□□□ -1.75
SMY2	YBR172C	VMA1	P17255	1071 aa	Known RBP	4.12	□□□□□ -1.75
SMY2	YBR172C	IOC2	Q12072	812 aa		4.12	□□□□□ -1.75
SMY2	YBR172C	STS1	P38637	319 aa		4.11	□□□□□ -1.75
SMY2	YBR172C	BMT6	Q12291	365 aa		4.1	□□□□□ -1.75
SMY2	YBR172C	SAM3	Q08986	587 aa		4.1	□□□□□ -1.75
SMY2	YBR172C	RGA2	Q06407	1009 aa		4.09	□□□□□ -1.75
SMY2	YBR172C	TRP5	P00931	707 aa	Known RBP	4.09	□□□□□ -1.76
SMY2	YBR172C	RTG1	P32607	177 aa		4.09	□□□□□ -1.76
SMY2	YBR172C	RCR1	P38212	213 aa		4.09	□□□□□ -1.76
SMY2	YBR172C	ABP1	P15891	592 aa	Known RBP	4.07	□□□□□ -1.76
SMY2	YBR172C	YNL035C	P53962	389 aa	Known RBP	4.07	□□□□□ -1.76
SMY2	YBR172C	TFG1	P41895	735 aa	Predicted RBP	4.06	□□□□□ -1.76
SMY2	YBR172C	NCR1	Q12200	1170 aa		4.06	□□□□□ -1.76
SMY2	YBR172C	GYP5	Q12344	894 aa		4.06	□□□□□ -1.76
SMY2	YBR172C	SEC61	P32915	480 aa		4.05	□□□□□ -1.76
SMY2	YBR172C	HTA1	P04911	132 aa	Known RBP	4.03	□□□□□ -1.76
SMY2	YBR172C	HTA2	P04912	132 aa		4.03	□□□□□ -1.76
SMY2	YBR172C	JIP4	Q03361	876 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms